RNA–Protein interactions for RNA: ENST00000588957.5

GFAP-215, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-215ENST00000588957 PPP1R9AQ9ULJ8 1098 aa16.66■□□□□ 0.26
GFAP-215ENST00000588957 KIF3AQ9Y496 699 aa16.66■□□□□ 0.26
GFAP-215ENST00000588957 OTOFQ9HC10 1997 aa16.66■□□□□ 0.26
GFAP-215ENST00000588957 COPB2P35606 906 aa16.65■□□□□ 0.26
GFAP-215ENST00000588957 OAZ1P54368 228 aa16.65■□□□□ 0.26
GFAP-215ENST00000588957 TMTC3Q6ZXV5 915 aa16.65■□□□□ 0.26
GFAP-215ENST00000588957 RRP36Q96EU6 259 aaKnown RBP16.65■□□□□ 0.26
GFAP-215ENST00000588957 SEC63Q9UGP8 760 aaKnown RBP16.65■□□□□ 0.26
GFAP-215ENST00000588957 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.65■□□□□ 0.26
GFAP-215ENST00000588957 IFNAR1P17181 557 aa16.64■□□□□ 0.25
GFAP-215ENST00000588957 ANP32AP39687 249 aaKnown RBP16.64■□□□□ 0.25
GFAP-215ENST00000588957 CCNA1P78396 465 aa16.64■□□□□ 0.25
GFAP-215ENST00000588957 TAF1CQ15572 869 aaPredicted RBP16.64■□□□□ 0.25
GFAP-215ENST00000588957 ME3Q16798 604 aa16.64■□□□□ 0.25
GFAP-215ENST00000588957 KIAA1755Q5JYT7 1200 aa16.64■□□□□ 0.25
GFAP-215ENST00000588957 TREML2Q5T2D2 321 aa16.64■□□□□ 0.25
GFAP-215ENST00000588957 WASF1Q92558 559 aa16.64■□□□□ 0.25
GFAP-215ENST00000588957 GTF3C6Q969F1 213 aa16.64■□□□□ 0.25
GFAP-215ENST00000588957 KIFC2Q96AC6 838 aa16.64■□□□□ 0.25
GFAP-215ENST00000588957 NUP88Q99567 741 aaPredicted RBP16.64■□□□□ 0.25
GFAP-215ENST00000588957 MYL10Q9BUA6 226 aa16.64■□□□□ 0.25
GFAP-215ENST00000588957 RIOX1Q9H6W3 641 aa16.64■□□□□ 0.25
GFAP-215ENST00000588957 ADAMTS5Q9UNA0 930 aa16.64■□□□□ 0.25
GFAP-215ENST00000588957 HPS5Q9UPZ3 1129 aa16.64■□□□□ 0.25
GFAP-215ENST00000588957 RABGAP1Q9Y3P9 1069 aa16.64■□□□□ 0.25
GFAP-215ENST00000588957 FRMPD2Q68DX3 1309 aaPredicted RBP16.64■□□□□ 0.25
GFAP-215ENST00000588957 K7ELQ4 463 aaPredicted RBP16.63■□□□□ 0.25
GFAP-215ENST00000588957 AOC2O75106 756 aa16.63■□□□□ 0.25
GFAP-215ENST00000588957 GOLGA8HP0CJ92 632 aa16.63■□□□□ 0.25
GFAP-215ENST00000588957 HERVK_113P62684 666 aa16.63■□□□□ 0.25
GFAP-215ENST00000588957 CCT2P78371 535 aaKnown RBP16.63■□□□□ 0.25
GFAP-215ENST00000588957 HMGN5P82970 282 aaKnown RBP16.63■□□□□ 0.25
GFAP-215ENST00000588957 SSRP1Q08945 709 aaKnown RBP16.63■□□□□ 0.25
GFAP-215ENST00000588957 STK3Q13188 491 aa16.63■□□□□ 0.25
GFAP-215ENST00000588957 NOL8Q76FK4 1167 aaKnown RBP16.63■□□□□ 0.25
GFAP-215ENST00000588957 TEX2Q8IWB9 1127 aa16.63■□□□□ 0.25
GFAP-215ENST00000588957 CCDC144CPQ8IYA2 1237 aa16.63■□□□□ 0.25
GFAP-215ENST00000588957 FAM177A1Q8N128 213 aaPredicted RBP16.63■□□□□ 0.25
GFAP-215ENST00000588957 FAM43AQ8N2R8 423 aa16.63■□□□□ 0.25
GFAP-215ENST00000588957 TMX3Q96JJ7 454 aa16.63■□□□□ 0.25
GFAP-215ENST00000588957 P2RX7Q99572 595 aaKnown RBP16.63■□□□□ 0.25
GFAP-215ENST00000588957 PTPN18Q99952 460 aa16.63■□□□□ 0.25
GFAP-215ENST00000588957 CFHR5Q9BXR6 569 aa16.63■□□□□ 0.25
GFAP-215ENST00000588957 RNF26Q9BY78 433 aaPredicted RBP16.63■□□□□ 0.25
GFAP-215ENST00000588957 MAF1Q9H063 256 aa16.63■□□□□ 0.25
GFAP-215ENST00000588957 PRR12Q9ULL5 1215 aa16.63■□□□□ 0.25
GFAP-215ENST00000588957 MYH4Q9Y623 1939 aa16.62■□□□□ 0.25
GFAP-215ENST00000588957 PNMA6FA0A0J9YX94 578 aa16.62■□□□□ 0.25
GFAP-215ENST00000588957 hCG_1984214I3L0E3 225 aa16.62■□□□□ 0.25
GFAP-215ENST00000588957 VWA5AO00534 786 aa16.62■□□□□ 0.25
GFAP-215ENST00000588957 ATP2A1O14983 1001 aa16.62■□□□□ 0.25
GFAP-215ENST00000588957 PDIA4P13667 645 aaKnown RBP16.62■□□□□ 0.25
GFAP-215ENST00000588957 XBP1P17861 261 aa16.62■□□□□ 0.25
GFAP-215ENST00000588957 RXRAP19793 462 aa16.62■□□□□ 0.25
GFAP-215ENST00000588957 ADD1P35611 737 aaKnown RBP16.62■□□□□ 0.25
GFAP-215ENST00000588957 ADGRF4Q8IZF3 695 aa16.62■□□□□ 0.25
GFAP-215ENST00000588957 STAG2Q8N3U4 1231 aa16.62■□□□□ 0.25
GFAP-215ENST00000588957 ZNF713Q8N859 430 aaPredicted RBP16.62■□□□□ 0.25
GFAP-215ENST00000588957 SAGE1Q9NXZ1 904 aa16.62■□□□□ 0.25
GFAP-215ENST00000588957 DAXXQ9UER7 740 aaPredicted RBP16.62■□□□□ 0.25
GFAP-215ENST00000588957 PHIPQ8WWQ0 1821 aa16.61■□□□□ 0.25
GFAP-215ENST00000588957 IGF2BP3O00425 579 aaKnown RBP eCLIP16.61■□□□□ 0.25
GFAP-215ENST00000588957 ZBTB5O15062 677 aa16.61■□□□□ 0.25
GFAP-215ENST00000588957 PRPF3O43395 683 aaKnown RBP16.61■□□□□ 0.25
GFAP-215ENST00000588957 TLR2O60603 784 aa16.61■□□□□ 0.25
GFAP-215ENST00000588957 SLC25A27O95847 323 aa16.61■□□□□ 0.25
GFAP-215ENST00000588957 HSP90AA1P07900 732 aaKnown RBP16.61■□□□□ 0.25
GFAP-215ENST00000588957 HTRA3P83110 453 aa16.61■□□□□ 0.25
GFAP-215ENST00000588957 SCRN1Q12765 414 aa16.61■□□□□ 0.25
GFAP-215ENST00000588957 ARHGEF6Q15052 776 aa16.61■□□□□ 0.25
GFAP-215ENST00000588957 TKFCQ3LXA3 575 aa16.61■□□□□ 0.25
GFAP-215ENST00000588957 TTBK2Q6IQ55 1244 aa16.61■□□□□ 0.25
GFAP-215ENST00000588957 CCAR1Q8IX12 1150 aaKnown RBP16.61■□□□□ 0.25
GFAP-215ENST00000588957 SRBD1Q8N5C6 995 aaKnown RBP16.61■□□□□ 0.25
GFAP-215ENST00000588957 CCDC12Q8WUD4 166 aaPredicted RBP16.61■□□□□ 0.25
GFAP-215ENST00000588957 INTS4Q96HW7 963 aaKnown RBP16.61■□□□□ 0.25
GFAP-215ENST00000588957 LARP6Q9BRS8 491 aaKnown RBP16.61■□□□□ 0.25
GFAP-215ENST00000588957 UBA5Q9GZZ9 404 aa16.61■□□□□ 0.25
GFAP-215ENST00000588957 RANBP17Q9H2T7 1088 aaKnown RBP16.61■□□□□ 0.25
GFAP-215ENST00000588957 SLC38A10Q9HBR0 1119 aa16.61■□□□□ 0.25
GFAP-215ENST00000588957 VAT1LQ9HCJ6 419 aa16.61■□□□□ 0.25
GFAP-215ENST00000588957 SPDYE16A6NNV3 312 aaPredicted RBP16.6■□□□□ 0.25
GFAP-215ENST00000588957 DEXIO95424 95 aa16.6■□□□□ 0.25
GFAP-215ENST00000588957 CDC27P30260 824 aa16.6■□□□□ 0.25
GFAP-215ENST00000588957 SLC16A2P36021 539 aa16.6■□□□□ 0.25
GFAP-215ENST00000588957 DGKZQ13574 1117 aa16.6■□□□□ 0.25
GFAP-215ENST00000588957 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
GFAP-215ENST00000588957 GPRC5AQ8NFJ5 357 aa16.6■□□□□ 0.25
GFAP-215ENST00000588957 MTMR8Q96EF0 704 aa16.6■□□□□ 0.25
GFAP-215ENST00000588957 AMNQ9BXJ7 453 aa16.6■□□□□ 0.25
GFAP-215ENST00000588957 TEX13BQ9BXU2 312 aa16.6■□□□□ 0.25
GFAP-215ENST00000588957 GLT8D2Q9H1C3 349 aa16.6■□□□□ 0.25
GFAP-215ENST00000588957 JMJD4Q9H9V9 463 aa16.6■□□□□ 0.25
GFAP-215ENST00000588957 FAM217BQ9NTX9 383 aaPredicted RBP16.6■□□□□ 0.25
GFAP-215ENST00000588957 FBXO28Q9NVF7 368 aa16.6■□□□□ 0.25
GFAP-215ENST00000588957 ICAM1P05362 532 aa16.59■□□□□ 0.25
GFAP-215ENST00000588957 STAT3P40763 770 aa16.59■□□□□ 0.25
GFAP-215ENST00000588957 NTRK3Q16288 839 aa16.59■□□□□ 0.25
GFAP-215ENST00000588957 FAM110CQ1W6H9 321 aa16.59■□□□□ 0.25
GFAP-215ENST00000588957 NOM1Q5C9Z4 860 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms