RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.84□□□□□ -0.35
BCAS3-220ENST00000588720 DNAI1Q9UI46 699 aa12.84□□□□□ -0.35
BCAS3-220ENST00000588720 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.84□□□□□ -0.35
BCAS3-220ENST00000588720 CSGALNACT2Q8N6G5 542 aa12.84□□□□□ -0.35
BCAS3-220ENST00000588720 IGSF22Q8N9C0 903 aa12.84□□□□□ -0.35
BCAS3-220ENST00000588720 MRFAP1L1Q96HT8 127 aa12.84□□□□□ -0.35
BCAS3-220ENST00000588720 SLC4A9Q96Q91 983 aa12.84□□□□□ -0.35
BCAS3-220ENST00000588720 BAG1Q99933 345 aaPredicted RBP12.84□□□□□ -0.35
BCAS3-220ENST00000588720 CSRNP1Q96S65 589 aa12.84□□□□□ -0.35
BCAS3-220ENST00000588720 PLCD4Q9BRC7 762 aa12.84□□□□□ -0.35
BCAS3-220ENST00000588720 XPO4Q9C0E2 1151 aaKnown RBP12.84□□□□□ -0.35
BCAS3-220ENST00000588720 NT5C3AQ9H0P0 336 aa12.84□□□□□ -0.35
BCAS3-220ENST00000588720 BLZF1Q9H2G9 400 aa12.84□□□□□ -0.35
BCAS3-220ENST00000588720 LTN1O94822 1766 aa12.84□□□□□ -0.35
BCAS3-220ENST00000588720 CFBP00751 764 aa12.83□□□□□ -0.35
BCAS3-220ENST00000588720 LMAN1P49257 510 aa12.83□□□□□ -0.35
BCAS3-220ENST00000588720 SH3BGRP55822 239 aaPredicted RBP12.83□□□□□ -0.35
BCAS3-220ENST00000588720 TTLL6Q8N841 843 aa12.83□□□□□ -0.35
BCAS3-220ENST00000588720 IGDCC4Q8TDY8 1250 aa12.83□□□□□ -0.35
BCAS3-220ENST00000588720 PGBD1Q96JS3 809 aa12.83□□□□□ -0.35
BCAS3-220ENST00000588720 ALS2CR12Q96Q35 445 aa12.83□□□□□ -0.35
BCAS3-220ENST00000588720 BCS1LQ9Y276 419 aa12.83□□□□□ -0.35
BCAS3-220ENST00000588720 SRPRBQ9Y5M8 271 aaKnown RBP12.83□□□□□ -0.35
BCAS3-220ENST00000588720 USP17L2Q6R6M4 530 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 FMNL3Q8IVF7 1028 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 CCDC50Q8IVM0 306 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 RTKN2Q8IZC4 609 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 PLCD3Q8N3E9 789 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 PPM1EQ8WY54 764 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 VPS16Q9H269 839 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 CENPHQ9H3R5 247 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 ARFGAP3Q9NP61 516 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.83□□□□□ -0.36
BCAS3-220ENST00000588720 PCDHA1Q9Y5I3 950 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 ADAMTSL3P82987 1691 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 DLG5Q8TDM6 1919 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 TRIM14Q14142 442 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 PLS1Q14651 629 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 FBXO11Q86XK2 927 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 TRMT44Q8IYL2 757 aaKnown RBP12.83□□□□□ -0.36
BCAS3-220ENST00000588720 TMX1Q9H3N1 280 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 SUGT1Q9Y2Z0 365 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 PCDHB6Q9Y5E3 794 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 B4DLN1 442 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 GTPBP6O43824 516 aaPredicted RBP12.83□□□□□ -0.36
BCAS3-220ENST00000588720 WDHD1O75717 1129 aaPredicted RBP12.83□□□□□ -0.36
BCAS3-220ENST00000588720 FOXP4Q8IVH2 680 aaPredicted RBP12.83□□□□□ -0.36
BCAS3-220ENST00000588720 TBC1D16Q8TBP0 767 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 EFCC1Q9HA90 598 aa12.83□□□□□ -0.36
BCAS3-220ENST00000588720 TMCO5BA8MYB1 307 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 TRAF5O00463 557 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 RPL13P26373 211 aaKnown RBP12.82□□□□□ -0.36
BCAS3-220ENST00000588720 TECP42680 631 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 TBC1D8BQ0IIM8 1120 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 GSDMAQ96QA5 445 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 EPB41L4AQ9HCS5 686 aaPredicted RBP12.82□□□□□ -0.36
BCAS3-220ENST00000588720 H7C1D1 291 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 ANTXR2P58335 489 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 KRT83P78385 493 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 RASGRP4Q8TDF6 673 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 SH3GLB2Q9NR46 395 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 PCDHA12Q9UN75 941 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 NCAPH2Q6IBW4 605 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 NELFBQ8WX92 580 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 PIGSQ96S52 555 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 TMEM47Q9BQJ4 181 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 AMNQ9BXJ7 453 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 DNM3Q9UQ16 869 aa12.82□□□□□ -0.36
BCAS3-220ENST00000588720 MED1Q15648 1581 aaPredicted RBP12.82□□□□□ -0.36
BCAS3-220ENST00000588720 TMEM232C9JQI7 657 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 POTEJP0CG39 1038 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 KRT13P13646 458 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 PAFAH1B1P43034 410 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 SBK1Q52WX2 424 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 C12orf60Q5U649 245 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 GBP6Q6ZN66 633 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 KIFC2Q96AC6 838 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 NOC4LQ9BVI4 516 aaKnown RBP12.81□□□□□ -0.36
BCAS3-220ENST00000588720 SLFN14P0C7P3 912 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 CCDC172P0C7W6 258 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 USP37Q86T82 979 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 CPXCR1Q8N123 301 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 NEK11Q8NG66 645 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 CCDC42Q96M95 316 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 TMOD4Q9NZQ9 345 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 KDM3AQ9Y4C1 1321 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 CRKP46108 304 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 DPCR1Q3MIW9 517 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 LRP10Q7Z4F1 713 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 AK8Q96MA6 479 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 ATP6V0A2Q9Y487 856 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 SETD1AO15047 1707 aaKnown RBP12.81□□□□□ -0.36
BCAS3-220ENST00000588720 CLRN2A0PK11 232 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 NMT2O60551 498 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 ZBED4O75132 1171 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 FOSP01100 380 aaPredicted RBP12.81□□□□□ -0.36
BCAS3-220ENST00000588720 PFKFB3Q16875 520 aaPredicted RBP12.81□□□□□ -0.36
BCAS3-220ENST00000588720 ZNF827Q17R98 1081 aa12.81□□□□□ -0.36
BCAS3-220ENST00000588720 HERC4Q5GLZ8 1057 aaPredicted RBP12.81□□□□□ -0.36
BCAS3-220ENST00000588720 DYMQ7RTS9 669 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms