RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 DPF3Q92784 378 aa17.08■□□□□ 0.32
DDX39A-208ENST00000588692 PAWRQ96IZ0 340 aaKnown RBP17.08■□□□□ 0.32
DDX39A-208ENST00000588692 MMP19Q99542 508 aa17.08■□□□□ 0.32
DDX39A-208ENST00000588692 RNF41Q9H4P4 317 aaPredicted RBP17.08■□□□□ 0.32
DDX39A-208ENST00000588692 INCENPQ9NQS7 918 aa17.08■□□□□ 0.32
DDX39A-208ENST00000588692 TOMM22Q9NS69 142 aa17.08■□□□□ 0.32
DDX39A-208ENST00000588692 CTDP1Q9Y5B0 961 aaPredicted RBP17.08■□□□□ 0.32
DDX39A-208ENST00000588692 TACC3Q9Y6A5 838 aa17.08■□□□□ 0.32
DDX39A-208ENST00000588692 COBLO75128 1261 aa17.07■□□□□ 0.32
DDX39A-208ENST00000588692 SLC1A4P43007 532 aa17.07■□□□□ 0.32
DDX39A-208ENST00000588692 STAT2P52630 851 aa17.07■□□□□ 0.32
DDX39A-208ENST00000588692 OAZ1P54368 228 aa17.07■□□□□ 0.32
DDX39A-208ENST00000588692 AKNAD1Q5T1N1 836 aa17.07■□□□□ 0.32
DDX39A-208ENST00000588692 MFSD6Q6ZSS7 791 aa17.07■□□□□ 0.32
DDX39A-208ENST00000588692 FAM160B2Q86V87 743 aa17.07■□□□□ 0.32
DDX39A-208ENST00000588692 STAG1Q8WVM7 1258 aa17.07■□□□□ 0.32
DDX39A-208ENST00000588692 KIFC2Q96AC6 838 aa17.07■□□□□ 0.32
DDX39A-208ENST00000588692 NBPF3Q9H094 633 aa17.07■□□□□ 0.32
DDX39A-208ENST00000588692 SLC38A10Q9HBR0 1119 aa17.07■□□□□ 0.32
DDX39A-208ENST00000588692 TCP11L1Q9NUJ3 509 aa17.07■□□□□ 0.32
DDX39A-208ENST00000588692 CEP290O15078 2479 aa17.07■□□□□ 0.32
DDX39A-208ENST00000588692 NMT2O60551 498 aa17.06■□□□□ 0.32
DDX39A-208ENST00000588692 PLA2G6O60733 806 aa17.06■□□□□ 0.32
DDX39A-208ENST00000588692 CYBAP13498 195 aa17.06■□□□□ 0.32
DDX39A-208ENST00000588692 CYP2C19P33261 490 aa17.06■□□□□ 0.32
DDX39A-208ENST00000588692 HAND2P61296 217 aa17.06■□□□□ 0.32
DDX39A-208ENST00000588692 RRP12Q5JTH9 1297 aaKnown RBP17.06■□□□□ 0.32
DDX39A-208ENST00000588692 LHX8Q68G74 356 aa17.06■□□□□ 0.32
DDX39A-208ENST00000588692 DIS3LQ8TF46 1054 aaKnown RBP17.06■□□□□ 0.32
DDX39A-208ENST00000588692 CHURC1Q8WUH1 139 aa17.06■□□□□ 0.32
DDX39A-208ENST00000588692 MAML3Q96JK9 1138 aa17.06■□□□□ 0.32
DDX39A-208ENST00000588692 DSCC1Q9BVC3 393 aa17.06■□□□□ 0.32
DDX39A-208ENST00000588692 DIS3Q9Y2L1 958 aaKnown RBP17.06■□□□□ 0.32
DDX39A-208ENST00000588692 NR2E3Q9Y5X4 410 aa17.06■□□□□ 0.32
DDX39A-208ENST00000588692 ALPK3Q96L96 1907 aa17.06■□□□□ 0.32
DDX39A-208ENST00000588692 TMEM232C9JQI7 657 aa17.05■□□□□ 0.32
DDX39A-208ENST00000588692 ZNF213O14771 459 aa17.05■□□□□ 0.32
DDX39A-208ENST00000588692 GSPT1P15170 499 aaKnown RBP17.05■□□□□ 0.32
DDX39A-208ENST00000588692 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.05■□□□□ 0.32
DDX39A-208ENST00000588692 FBXO40Q9UH90 709 aa17.05■□□□□ 0.32
DDX39A-208ENST00000588692 DDX20Q9UHI6 824 aaKnown RBP17.05■□□□□ 0.32
DDX39A-208ENST00000588692 ISY1Q9ULR0 285 aaKnown RBP17.05■□□□□ 0.32
DDX39A-208ENST00000588692 RAD50Q92878 1312 aa17.05■□□□□ 0.32
DDX39A-208ENST00000588692 MCCP23508 829 aa17.05■□□□□ 0.32
DDX39A-208ENST00000588692 CNGA1P29973 690 aa17.05■□□□□ 0.32
DDX39A-208ENST00000588692 MNX1P50219 401 aaPredicted RBP17.05■□□□□ 0.32
DDX39A-208ENST00000588692 RCSD1Q6JBY9 416 aa17.05■□□□□ 0.32
DDX39A-208ENST00000588692 TBC1D10CQ8IV04 446 aa17.05■□□□□ 0.32
DDX39A-208ENST00000588692 CPXCR1Q8N123 301 aa17.05■□□□□ 0.32
DDX39A-208ENST00000588692 C11orf49Q9H6J7 331 aa17.05■□□□□ 0.32
DDX39A-208ENST00000588692 NRBP1Q9UHY1 535 aa17.05■□□□□ 0.32
DDX39A-208ENST00000588692 H0YGN5 161 aa17.04■□□□□ 0.32
DDX39A-208ENST00000588692 TOP1P11387 765 aaKnown RBP17.04■□□□□ 0.32
DDX39A-208ENST00000588692 IKQ13123 557 aaPredicted RBP17.04■□□□□ 0.32
DDX39A-208ENST00000588692 ZNF792Q3KQV3 632 aa17.04■□□□□ 0.32
DDX39A-208ENST00000588692 DCAF4Q8WV16 495 aa17.04■□□□□ 0.32
DDX39A-208ENST00000588692 ESR2Q92731 530 aa17.04■□□□□ 0.32
DDX39A-208ENST00000588692 TTC14Q96N46 770 aa17.04■□□□□ 0.32
DDX39A-208ENST00000588692 RAVER2Q9HCJ3 691 aaKnown RBP17.04■□□□□ 0.32
DDX39A-208ENST00000588692 CTNNA3Q9UI47 895 aa17.04■□□□□ 0.32
DDX39A-208ENST00000588692 RIPK3Q9Y572 518 aa17.04■□□□□ 0.32
DDX39A-208ENST00000588692 SEPT4O43236 478 aa17.03■□□□□ 0.32
DDX39A-208ENST00000588692 EVI5O60447 810 aa17.03■□□□□ 0.32
DDX39A-208ENST00000588692 PGK2P07205 417 aa17.03■□□□□ 0.32
DDX39A-208ENST00000588692 TRPV1Q8NER1 839 aa17.03■□□□□ 0.32
DDX39A-208ENST00000588692 CHST13Q8NET6 341 aa17.03■□□□□ 0.32
DDX39A-208ENST00000588692 IMMTQ16891 758 aaKnown RBP17.02■□□□□ 0.32
DDX39A-208ENST00000588692 KCTD1Q719H9 257 aa17.02■□□□□ 0.32
DDX39A-208ENST00000588692 MSL3Q8N5Y2 521 aaKnown RBP17.02■□□□□ 0.32
DDX39A-208ENST00000588692 RUFY2Q8WXA3 655 aa17.02■□□□□ 0.32
DDX39A-208ENST00000588692 DDX11Q96FC9 970 aa17.02■□□□□ 0.32
DDX39A-208ENST00000588692 TMEM47Q9BQJ4 181 aa17.02■□□□□ 0.32
DDX39A-208ENST00000588692 TINF2Q9BSI4 451 aa17.02■□□□□ 0.32
DDX39A-208ENST00000588692 NEDD4P46934 1319 aa17.02■□□□□ 0.31
DDX39A-208ENST00000588692 COL6A1P12109 1028 aa17.01■□□□□ 0.31
DDX39A-208ENST00000588692 CCDC96Q2M329 555 aa17.01■□□□□ 0.31
DDX39A-208ENST00000588692 TKFCQ3LXA3 575 aa17.01■□□□□ 0.31
DDX39A-208ENST00000588692 CCDC178Q5BJE1 867 aa17.01■□□□□ 0.31
DDX39A-208ENST00000588692 DNAJC25-GNG10A0A024R161 153 aa17■□□□□ 0.31
DDX39A-208ENST00000588692 SLC4A3P48751 1232 aa17■□□□□ 0.31
DDX39A-208ENST00000588692 ZNF467Q7Z7K2 595 aaPredicted RBP17■□□□□ 0.31
DDX39A-208ENST00000588692 IQCA1Q86XH1 822 aa17■□□□□ 0.31
DDX39A-208ENST00000588692 DGKHQ86XP1 1220 aa17■□□□□ 0.31
DDX39A-208ENST00000588692 ANKRD35Q8N283 1001 aa17■□□□□ 0.31
DDX39A-208ENST00000588692 ACAD9Q9H845 621 aa17■□□□□ 0.31
DDX39A-208ENST00000588692 PRR12Q9ULL5 1215 aa17■□□□□ 0.31
DDX39A-208ENST00000588692 PFASO15067 1338 aa17■□□□□ 0.31
DDX39A-208ENST00000588692 SYNGAP1Q96PV0 1343 aa17■□□□□ 0.31
DDX39A-208ENST00000588692 DNM1LO00429 736 aa16.99■□□□□ 0.31
DDX39A-208ENST00000588692 BTNL9Q6UXG8 535 aa16.99■□□□□ 0.31
DDX39A-208ENST00000588692 RASGRP2Q7LDG7 609 aa16.99■□□□□ 0.31
DDX39A-208ENST00000588692 ARRDC4Q8NCT1 418 aa16.99■□□□□ 0.31
DDX39A-208ENST00000588692 CNNM2Q9H8M5 875 aa16.99■□□□□ 0.31
DDX39A-208ENST00000588692 MTMR7Q9Y216 660 aa16.99■□□□□ 0.31
DDX39A-208ENST00000588692 CNPY2Q9Y2B0 182 aa16.99■□□□□ 0.31
DDX39A-208ENST00000588692 ZNF536O15090 1300 aa16.99■□□□□ 0.31
DDX39A-208ENST00000588692 KDM4AO75164 1064 aa16.99■□□□□ 0.31
DDX39A-208ENST00000588692 CHMLP26374 656 aa16.99■□□□□ 0.31
DDX39A-208ENST00000588692 HABP4Q5JVS0 413 aaKnown RBP16.99■□□□□ 0.31
DDX39A-208ENST00000588692 MAMDC4Q6UXC1 1216 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms