RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 IMMTQ16891 758 aaKnown RBP12.39□□□□□ -0.43
TPM4-209ENST00000588483 OLFML2BQ68BL8 750 aa12.39□□□□□ -0.43
TPM4-209ENST00000588483 RCSD1Q6JBY9 416 aa12.39□□□□□ -0.43
TPM4-209ENST00000588483 FAM160B2Q86V87 743 aa12.39□□□□□ -0.43
TPM4-209ENST00000588483 ANKLE1Q8NAG6 615 aa12.39□□□□□ -0.43
TPM4-209ENST00000588483 DCAF4Q8WV16 495 aa12.39□□□□□ -0.43
TPM4-209ENST00000588483 ESR2Q92731 530 aa12.39□□□□□ -0.43
TPM4-209ENST00000588483 CWC22Q9HCG8 908 aaKnown RBP12.39□□□□□ -0.43
TPM4-209ENST00000588483 FLRT1Q9NZU1 646 aa12.39□□□□□ -0.43
TPM4-209ENST00000588483 PLXNA1Q9UIW2 1896 aa12.38□□□□□ -0.43
TPM4-209ENST00000588483 RAD21O60216 631 aa12.38□□□□□ -0.43
TPM4-209ENST00000588483 SNHG28P0DPA3 235 aa12.38□□□□□ -0.43
TPM4-209ENST00000588483 TOP1P11387 765 aaKnown RBP12.38□□□□□ -0.43
TPM4-209ENST00000588483 CACNB2Q08289 660 aaPredicted RBP12.38□□□□□ -0.43
TPM4-209ENST00000588483 PLS1Q14651 629 aa12.38□□□□□ -0.43
TPM4-209ENST00000588483 WDR78Q5VTH9 848 aa12.38□□□□□ -0.43
TPM4-209ENST00000588483 BTNL9Q6UXG8 535 aa12.38□□□□□ -0.43
TPM4-209ENST00000588483 NCAPG2Q86XI2 1143 aa12.38□□□□□ -0.43
TPM4-209ENST00000588483 DGKHQ86XP1 1220 aa12.38□□□□□ -0.43
TPM4-209ENST00000588483 NPLOC4Q8TAT6 608 aa12.38□□□□□ -0.43
TPM4-209ENST00000588483 CHURC1Q8WUH1 139 aa12.38□□□□□ -0.43
TPM4-209ENST00000588483 DEFB118Q96PH6 123 aa12.38□□□□□ -0.43
TPM4-209ENST00000588483 TMEM47Q9BQJ4 181 aa12.38□□□□□ -0.43
TPM4-209ENST00000588483 SLC5A4Q9NY91 659 aa12.38□□□□□ -0.43
TPM4-209ENST00000588483 DIS3Q9Y2L1 958 aaKnown RBP12.38□□□□□ -0.43
TPM4-209ENST00000588483 FRMPD3Q5JV73 1810 aa12.38□□□□□ -0.43
TPM4-209ENST00000588483 TMEM232C9JQI7 657 aa12.37□□□□□ -0.43
TPM4-209ENST00000588483 COBLO75128 1261 aa12.37□□□□□ -0.43
TPM4-209ENST00000588483 ZBED4O75132 1171 aa12.37□□□□□ -0.43
TPM4-209ENST00000588483 FCER1AP12319 257 aa12.37□□□□□ -0.43
TPM4-209ENST00000588483 MCCP23508 829 aa12.37□□□□□ -0.43
TPM4-209ENST00000588483 CCDC178Q5BJE1 867 aa12.37□□□□□ -0.43
TPM4-209ENST00000588483 BMP2KLQ5H9B9 411 aa12.37□□□□□ -0.43
TPM4-209ENST00000588483 RRP12Q5JTH9 1297 aaKnown RBP12.37□□□□□ -0.43
TPM4-209ENST00000588483 PRPF38BQ5VTL8 546 aaKnown RBP12.37□□□□□ -0.43
TPM4-209ENST00000588483 MFSD14CQ5VZR4 134 aa12.37□□□□□ -0.43
TPM4-209ENST00000588483 ANKS1AQ92625 1134 aa12.37□□□□□ -0.43
TPM4-209ENST00000588483 CNNM2Q9H8M5 875 aa12.37□□□□□ -0.43
TPM4-209ENST00000588483 TOMM22Q9NS69 142 aa12.37□□□□□ -0.43
TPM4-209ENST00000588483 OGDHLQ9ULD0 1010 aa12.37□□□□□ -0.43
TPM4-209ENST00000588483 CEP290O15078 2479 aa12.36□□□□□ -0.43
TPM4-209ENST00000588483 CYBAP13498 195 aa12.36□□□□□ -0.43
TPM4-209ENST00000588483 LHX8Q68G74 356 aa12.36□□□□□ -0.43
TPM4-209ENST00000588483 SNRNP48Q6IEG0 339 aaKnown RBP12.36□□□□□ -0.43
TPM4-209ENST00000588483 DPP9Q86TI2 863 aa12.36□□□□□ -0.43
TPM4-209ENST00000588483 IQCA1Q86XH1 822 aa12.36□□□□□ -0.43
TPM4-209ENST00000588483 CHST13Q8NET6 341 aa12.36□□□□□ -0.43
TPM4-209ENST00000588483 MAP4K1Q92918 833 aa12.36□□□□□ -0.43
TPM4-209ENST00000588483 KIFC2Q96AC6 838 aa12.36□□□□□ -0.43
TPM4-209ENST00000588483 MAML3Q96JK9 1138 aa12.36□□□□□ -0.43
TPM4-209ENST00000588483 MMP19Q99542 508 aa12.36□□□□□ -0.43
TPM4-209ENST00000588483 KRT23Q9C075 422 aa12.36□□□□□ -0.43
TPM4-209ENST00000588483 FBXO40Q9UH90 709 aa12.36□□□□□ -0.43
TPM4-209ENST00000588483 NRBP1Q9UHY1 535 aa12.36□□□□□ -0.43
TPM4-209ENST00000588483 RIPK3Q9Y572 518 aa12.36□□□□□ -0.43
TPM4-209ENST00000588483 ZNF536O15090 1300 aa12.36□□□□□ -0.43
TPM4-209ENST00000588483 DNAH12Q6ZR08 3092 aa12.35□□□□□ -0.43
TPM4-209ENST00000588483 DNAJC25-GNG10A0A024R161 153 aa12.35□□□□□ -0.43
TPM4-209ENST00000588483 MSCO60682 206 aa12.35□□□□□ -0.43
TPM4-209ENST00000588483 KDM4AO75164 1064 aa12.35□□□□□ -0.43
TPM4-209ENST00000588483 FARP2O94887 1054 aaPredicted RBP12.35□□□□□ -0.43
TPM4-209ENST00000588483 PDHBP11177 359 aa12.35□□□□□ -0.43
TPM4-209ENST00000588483 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
TPM4-209ENST00000588483 PTH1RQ03431 593 aa12.35□□□□□ -0.43
TPM4-209ENST00000588483 KCTD2Q14681 263 aa12.35□□□□□ -0.43
TPM4-209ENST00000588483 ZNF792Q3KQV3 632 aa12.35□□□□□ -0.43
TPM4-209ENST00000588483 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
TPM4-209ENST00000588483 KCTD1Q719H9 257 aa12.35□□□□□ -0.43
TPM4-209ENST00000588483 RASGRP2Q7LDG7 609 aa12.35□□□□□ -0.43
TPM4-209ENST00000588483 MSL3Q8N5Y2 521 aaKnown RBP12.35□□□□□ -0.43
TPM4-209ENST00000588483 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
TPM4-209ENST00000588483 B4E1Z4 1266 aa12.34□□□□□ -0.43
TPM4-209ENST00000588483 TFRCP02786 760 aaKnown RBP12.34□□□□□ -0.43
TPM4-209ENST00000588483 CYP21A2P08686 494 aa12.34□□□□□ -0.43
TPM4-209ENST00000588483 CCND3P30281 292 aaPredicted RBP12.34□□□□□ -0.43
TPM4-209ENST00000588483 ZNF543Q08ER8 600 aa12.34□□□□□ -0.43
TPM4-209ENST00000588483 TKFCQ3LXA3 575 aa12.34□□□□□ -0.43
TPM4-209ENST00000588483 GPATCH4Q5T3I0 446 aaKnown RBP12.34□□□□□ -0.43
TPM4-209ENST00000588483 ZNF467Q7Z7K2 595 aaPredicted RBP12.34□□□□□ -0.43
TPM4-209ENST00000588483 ENAHQ8N8S7 591 aaPredicted RBP12.34□□□□□ -0.43
TPM4-209ENST00000588483 ZSCAN10Q96SZ4 725 aaPredicted RBP12.34□□□□□ -0.43
TPM4-209ENST00000588483 RANBP17Q9H2T7 1088 aaKnown RBP12.34□□□□□ -0.43
TPM4-209ENST00000588483 RAVER2Q9HCJ3 691 aaKnown RBP12.34□□□□□ -0.43
TPM4-209ENST00000588483 ZSWIM5Q9P217 1185 aa12.34□□□□□ -0.43
TPM4-209ENST00000588483 PRR12Q9ULL5 1215 aa12.34□□□□□ -0.43
TPM4-209ENST00000588483 CYP2C19P33261 490 aa12.33□□□□□ -0.44
TPM4-209ENST00000588483 MAMDC4Q6UXC1 1216 aa12.33□□□□□ -0.44
TPM4-209ENST00000588483 TRPV1Q8NER1 839 aa12.33□□□□□ -0.44
TPM4-209ENST00000588483 HTATIP2Q9BUP3 242 aa12.33□□□□□ -0.44
TPM4-209ENST00000588483 ACAD9Q9H845 621 aa12.33□□□□□ -0.44
TPM4-209ENST00000588483 CTDP1Q9Y5B0 961 aaPredicted RBP12.33□□□□□ -0.44
TPM4-209ENST00000588483 RANBP2P49792 3224 aaKnown RBP12.33□□□□□ -0.44
TPM4-209ENST00000588483 TNKSO95271 1327 aa12.33□□□□□ -0.44
TPM4-209ENST00000588483 SYNGAP1Q96PV0 1343 aa12.33□□□□□ -0.44
TPM4-209ENST00000588483 ALPK3Q96L96 1907 aa12.33□□□□□ -0.44
TPM4-209ENST00000588483 SMCHD1A6NHR9 2005 aa12.32□□□□□ -0.44
TPM4-209ENST00000588483 ICAM1P05362 532 aa12.32□□□□□ -0.44
TPM4-209ENST00000588483 PGK2P07205 417 aa12.32□□□□□ -0.44
TPM4-209ENST00000588483 COL6A1P12109 1028 aa12.32□□□□□ -0.44
TPM4-209ENST00000588483 IKQ13123 557 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms