RNA–Protein interactions for RNA: ENST00000588454.5

CALR-206, Transcript of calreticulin, humanhuman

TSL 3

Gene CALR, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-206ENST00000588454 SYNRGQ9UMZ2 1314 aa13.37□□□□□ -0.27
CALR-206ENST00000588454 SMIM22K7EJ46 135 aa13.36□□□□□ -0.27
CALR-206ENST00000588454 PRKAB2O43741 272 aa13.36□□□□□ -0.27
CALR-206ENST00000588454 DUSP11O75319 330 aaKnown RBP13.36□□□□□ -0.27
CALR-206ENST00000588454 PPIGQ13427 754 aaKnown RBP eCLIP13.36□□□□□ -0.27
CALR-206ENST00000588454 CCDC174Q6PII3 467 aa13.36□□□□□ -0.27
CALR-206ENST00000588454 MAMDC4Q6UXC1 1216 aa13.36□□□□□ -0.27
CALR-206ENST00000588454 GAS2L1Q99501 681 aaPredicted RBP13.36□□□□□ -0.27
CALR-206ENST00000588454 PBX4Q9BYU1 374 aa13.36□□□□□ -0.27
CALR-206ENST00000588454 ARMT1Q9H993 441 aa13.36□□□□□ -0.27
CALR-206ENST00000588454 MROH7Q68CQ1 1323 aa13.36□□□□□ -0.27
CALR-206ENST00000588454 SYNGAP1Q96PV0 1343 aa13.36□□□□□ -0.27
CALR-206ENST00000588454 GRXCR1A8MXD5 290 aa13.35□□□□□ -0.27
CALR-206ENST00000588454 GOLIM4O00461 696 aa13.35□□□□□ -0.27
CALR-206ENST00000588454 RLBP1P12271 317 aa13.35□□□□□ -0.27
CALR-206ENST00000588454 CST5P28325 142 aaPredicted RBP13.35□□□□□ -0.27
CALR-206ENST00000588454 PBX2P40425 430 aa13.35□□□□□ -0.27
CALR-206ENST00000588454 HSP90AB4PQ58FF6 505 aa13.35□□□□□ -0.27
CALR-206ENST00000588454 C16orf86Q6ZW13 317 aa13.35□□□□□ -0.27
CALR-206ENST00000588454 ITPRIPQ8IWB1 547 aa13.35□□□□□ -0.27
CALR-206ENST00000588454 RHPN1Q8TCX5 695 aa13.35□□□□□ -0.27
CALR-206ENST00000588454 GLT1D1Q96MS3 346 aa13.35□□□□□ -0.27
CALR-206ENST00000588454 ASB2Q96Q27 587 aa13.35□□□□□ -0.27
CALR-206ENST00000588454 PRDM12Q9H4Q4 367 aa13.35□□□□□ -0.27
CALR-206ENST00000588454 GOPCQ9HD26 462 aa13.35□□□□□ -0.27
CALR-206ENST00000588454 IL1RAPL2Q9NP60 686 aa13.35□□□□□ -0.27
CALR-206ENST00000588454 DNAJC25-GNG10A0A024R161 153 aa13.34□□□□□ -0.27
CALR-206ENST00000588454 CYP2D7A0A087X1C5 515 aa13.34□□□□□ -0.27
CALR-206ENST00000588454 MYADML2A6NDP7 307 aa13.34□□□□□ -0.27
CALR-206ENST00000588454 USP17L12C9JPN9 530 aa13.34□□□□□ -0.27
CALR-206ENST00000588454 USP17L21D6R901 530 aa13.34□□□□□ -0.27
CALR-206ENST00000588454 FAM83BQ5T0W9 1011 aa13.34□□□□□ -0.27
CALR-206ENST00000588454 CCDC129Q6ZRS4 1044 aa13.34□□□□□ -0.27
CALR-206ENST00000588454 ZNF467Q7Z7K2 595 aaPredicted RBP13.34□□□□□ -0.27
CALR-206ENST00000588454 FTSJ3Q8IY81 847 aaKnown RBP13.34□□□□□ -0.27
CALR-206ENST00000588454 TMEM199Q8N511 208 aa13.34□□□□□ -0.27
CALR-206ENST00000588454 PCSK9Q8NBP7 692 aaKnown RBP13.34□□□□□ -0.27
CALR-206ENST00000588454 PPM1EQ8WY54 764 aa13.34□□□□□ -0.27
CALR-206ENST00000588454 DNAJC2Q99543 621 aaKnown RBP13.34□□□□□ -0.27
CALR-206ENST00000588454 TEX13BQ9BXU2 312 aa13.34□□□□□ -0.27
CALR-206ENST00000588454 RIPK3Q9Y572 518 aa13.34□□□□□ -0.27
CALR-206ENST00000588454 ARVCFO00192 962 aa13.33□□□□□ -0.28
CALR-206ENST00000588454 MBD4O95243 580 aa13.33□□□□□ -0.28
CALR-206ENST00000588454 ASGR1P07306 291 aa13.33□□□□□ -0.28
CALR-206ENST00000588454 CSF2RAP15509 400 aa13.33□□□□□ -0.28
CALR-206ENST00000588454 ADD2P35612 726 aa13.33□□□□□ -0.28
CALR-206ENST00000588454 GJA9P57773 515 aa13.33□□□□□ -0.28
CALR-206ENST00000588454 ACVR2BQ13705 512 aa13.33□□□□□ -0.28
CALR-206ENST00000588454 ADGRE1Q14246 886 aa13.33□□□□□ -0.28
CALR-206ENST00000588454 SLFNL1Q499Z3 407 aa13.33□□□□□ -0.28
CALR-206ENST00000588454 ZNF365Q70YC5 407 aa13.33□□□□□ -0.28
CALR-206ENST00000588454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.28
CALR-206ENST00000588454 AMOTL1Q8IY63 956 aa13.33□□□□□ -0.28
CALR-206ENST00000588454 DDX11Q96FC9 970 aa13.33□□□□□ -0.28
CALR-206ENST00000588454 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.33□□□□□ -0.28
CALR-206ENST00000588454 UPF3AQ9H1J1 476 aaKnown RBP13.33□□□□□ -0.28
CALR-206ENST00000588454 THEGQ9P2T0 379 aa13.33□□□□□ -0.28
CALR-206ENST00000588454 MCM3APO60318 1980 aa13.32□□□□□ -0.28
CALR-206ENST00000588454 ATP2A1O14983 1001 aa13.32□□□□□ -0.28
CALR-206ENST00000588454 ADCY6O43306 1168 aa13.32□□□□□ -0.28
CALR-206ENST00000588454 C6orf222P0C671 652 aaPredicted RBP13.32□□□□□ -0.28
CALR-206ENST00000588454 ACRP10323 421 aa13.32□□□□□ -0.28
CALR-206ENST00000588454 IRX5P78411 483 aaPredicted RBP13.32□□□□□ -0.28
CALR-206ENST00000588454 MRPS5P82675 430 aaKnown RBP13.32□□□□□ -0.28
CALR-206ENST00000588454 SNRNP48Q6IEG0 339 aaKnown RBP13.32□□□□□ -0.28
CALR-206ENST00000588454 PSRC1Q6PGN9 363 aaPredicted RBP13.32□□□□□ -0.28
CALR-206ENST00000588454 CLASRPQ8N2M8 674 aaKnown RBP13.32□□□□□ -0.28
CALR-206ENST00000588454 HERVK_113Q902F9 699 aa13.32□□□□□ -0.28
CALR-206ENST00000588454 VTI1AQ96AJ9 217 aa13.32□□□□□ -0.28
CALR-206ENST00000588454 SLF1Q9BQI6 1058 aa13.32□□□□□ -0.28
CALR-206ENST00000588454 ABHD16BQ9H3Z7 469 aa13.32□□□□□ -0.28
CALR-206ENST00000588454 SPC25Q9HBM1 224 aa13.32□□□□□ -0.28
CALR-206ENST00000588454 PAG1Q9NWQ8 432 aa13.32□□□□□ -0.28
CALR-206ENST00000588454 ZHX1Q9UKY1 873 aaPredicted RBP13.32□□□□□ -0.28
CALR-206ENST00000588454 A0A0U1RQG5 324 aaPredicted RBP13.31□□□□□ -0.28
CALR-206ENST00000588454 RAD21O60216 631 aa13.31□□□□□ -0.28
CALR-206ENST00000588454 CD4P01730 458 aa13.31□□□□□ -0.28
CALR-206ENST00000588454 IFIT2P09913 472 aaKnown RBP13.31□□□□□ -0.28
CALR-206ENST00000588454 NKX3-2P78367 333 aa13.31□□□□□ -0.28
CALR-206ENST00000588454 RAB30Q15771 203 aa13.31□□□□□ -0.28
CALR-206ENST00000588454 CCDC144BQ3MJ40 725 aa13.31□□□□□ -0.28
CALR-206ENST00000588454 GNASQ5JWF2 1037 aa13.31□□□□□ -0.28
CALR-206ENST00000588454 CTR9Q6PD62 1173 aa13.31□□□□□ -0.28
CALR-206ENST00000588454 FAM126BQ8IXS8 530 aa13.31□□□□□ -0.28
CALR-206ENST00000588454 PRPF38AQ8NAV1 312 aaKnown RBP13.31□□□□□ -0.28
CALR-206ENST00000588454 ADAMTS19Q8TE59 1207 aa13.31□□□□□ -0.28
CALR-206ENST00000588454 KIF1BPQ96EK5 621 aa13.31□□□□□ -0.28
CALR-206ENST00000588454 IL23AQ9NPF7 189 aa13.31□□□□□ -0.28
CALR-206ENST00000588454 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.31□□□□□ -0.28
CALR-206ENST00000588454 RAPGEFL1Q9UHV5 662 aa13.31□□□□□ -0.28
CALR-206ENST00000588454 MSRAQ9UJ68 235 aa13.31□□□□□ -0.28
CALR-206ENST00000588454 F5H6K3 240 aa13.3□□□□□ -0.28
CALR-206ENST00000588454 CTAGE5O15320 804 aa13.3□□□□□ -0.28
CALR-206ENST00000588454 TLR3O15455 904 aaKnown RBP13.3□□□□□ -0.28
CALR-206ENST00000588454 KLRC3Q07444 240 aa13.3□□□□□ -0.28
CALR-206ENST00000588454 UBE3CQ15386 1083 aa13.3□□□□□ -0.28
CALR-206ENST00000588454 CCDC85BQ15834 202 aaPredicted RBP13.3□□□□□ -0.28
CALR-206ENST00000588454 SLC43A3Q8NBI5 491 aa13.3□□□□□ -0.28
CALR-206ENST00000588454 DDRGK1Q96HY6 314 aa13.3□□□□□ -0.28
CALR-206ENST00000588454 FGD4Q96M96 766 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms