RNA–Protein interactions for RNA: ENST00000588278.1

TPGS1-202, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

Gene TPGS1, Length 2,873 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-202ENST00000588278 ATP2B2Q01814 1243 aa17.48■□□□□ 0.39
TPGS1-202ENST00000588278 ALX1Q15699 326 aa17.48■□□□□ 0.39
TPGS1-202ENST00000588278 CAVIN4Q5BKX8 364 aa17.48■□□□□ 0.39
TPGS1-202ENST00000588278 IFIT1BQ5T764 474 aaKnown RBP17.48■□□□□ 0.39
TPGS1-202ENST00000588278 STAG1Q8WVM7 1258 aa17.48■□□□□ 0.39
TPGS1-202ENST00000588278 CSRNP2Q9H175 543 aa17.48■□□□□ 0.39
TPGS1-202ENST00000588278 USP17L12C9JPN9 530 aa17.48■□□□□ 0.39
TPGS1-202ENST00000588278 USP17L21D6R901 530 aa17.48■□□□□ 0.39
TPGS1-202ENST00000588278 ECM2O94769 699 aaPredicted RBP17.48■□□□□ 0.39
TPGS1-202ENST00000588278 DEXIO95424 95 aa17.48■□□□□ 0.39
TPGS1-202ENST00000588278 SARSP49591 514 aaKnown RBP17.48■□□□□ 0.39
TPGS1-202ENST00000588278 ZNF174Q15697 407 aa17.48■□□□□ 0.39
TPGS1-202ENST00000588278 EARS2Q5JPH6 523 aaKnown RBP17.48■□□□□ 0.39
TPGS1-202ENST00000588278 HDAC7Q8WUI4 952 aa17.48■□□□□ 0.39
TPGS1-202ENST00000588278 ABHD10Q9NUJ1 306 aa17.48■□□□□ 0.39
TPGS1-202ENST00000588278 CTNND2Q9UQB3 1225 aa17.48■□□□□ 0.39
TPGS1-202ENST00000588278 N4BP3O15049 544 aa17.47■□□□□ 0.39
TPGS1-202ENST00000588278 MATR3P43243 847 aaKnown RBP eCLIP17.47■□□□□ 0.39
TPGS1-202ENST00000588278 WDR93Q6P2C0 686 aa17.47■□□□□ 0.39
TPGS1-202ENST00000588278 RNF41Q9H4P4 317 aaPredicted RBP17.47■□□□□ 0.39
TPGS1-202ENST00000588278 FBXO2Q9UK22 296 aaPredicted RBP17.47■□□□□ 0.39
TPGS1-202ENST00000588278 TTF2Q9UNY4 1162 aaKnown RBP17.47■□□□□ 0.39
TPGS1-202ENST00000588278 SPEF2Q9C093 1822 aa17.47■□□□□ 0.39
TPGS1-202ENST00000588278 SHANK3Q9BYB0 1731 aa17.47■□□□□ 0.39
TPGS1-202ENST00000588278 PDE2AO00408 941 aaPredicted RBP17.47■□□□□ 0.39
TPGS1-202ENST00000588278 GNAT2P19087 354 aa17.47■□□□□ 0.39
TPGS1-202ENST00000588278 KRT9P35527 623 aa17.47■□□□□ 0.39
TPGS1-202ENST00000588278 AARSP49588 968 aaKnown RBP eCLIP17.47■□□□□ 0.39
TPGS1-202ENST00000588278 ATP1A2P50993 1020 aa17.47■□□□□ 0.39
TPGS1-202ENST00000588278 SLC51AQ86UW1 340 aa17.47■□□□□ 0.39
TPGS1-202ENST00000588278 CAGE1Q8TC20 777 aa17.47■□□□□ 0.39
TPGS1-202ENST00000588278 PSMB7Q99436 277 aa17.47■□□□□ 0.39
TPGS1-202ENST00000588278 BLZF1Q9H2G9 400 aa17.47■□□□□ 0.39
TPGS1-202ENST00000588278 CD248Q9HCU0 757 aa17.47■□□□□ 0.39
TPGS1-202ENST00000588278 GNL3LQ9NVN8 582 aaKnown RBP17.47■□□□□ 0.39
TPGS1-202ENST00000588278 FAM237AA0A1B0GTK4 181 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 CCDC196A0A1B0GTZ2 297 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 ACTN4O43707 911 aaKnown RBP17.46■□□□□ 0.39
TPGS1-202ENST00000588278 MYO1BO43795 1136 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 INPP5BP32019 993 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 PBX1P40424 430 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 PDCLQ13371 301 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 PARP10Q53GL7 1025 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 KCTD16Q68DU8 428 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 ENAHQ8N8S7 591 aaPredicted RBP17.46■□□□□ 0.39
TPGS1-202ENST00000588278 BANK1Q8NDB2 785 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 SMARCAL1Q9NZC9 954 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 GOLGA6BA6NDN3 693 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 PTF1AQ7RTS3 328 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 SH2D3CQ8N5H7 860 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.46■□□□□ 0.39
TPGS1-202ENST00000588278 DACH1Q9UI36 760 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 DUSP10Q9Y6W6 482 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 SLIT2O94813 1529 aa17.46■□□□□ 0.39
TPGS1-202ENST00000588278 H0YHG0 523 aa17.46■□□□□ 0.38
TPGS1-202ENST00000588278 SLC7A5Q01650 507 aa17.46■□□□□ 0.38
TPGS1-202ENST00000588278 SND1Q7KZF4 910 aaKnown RBP eCLIP17.46■□□□□ 0.38
TPGS1-202ENST00000588278 CAPS2Q9BXY5 557 aa17.46■□□□□ 0.38
TPGS1-202ENST00000588278 ATRNO75882 1429 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 WNT7AO00755 349 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 ZEB2O60315 1214 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 CCDC172P0C7W6 258 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 FAM98CQ17RN3 349 aaKnown RBP17.45■□□□□ 0.38
TPGS1-202ENST00000588278 RILPL1Q5EBL4 403 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 SPATA1Q5VX52 437 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 CATIPQ7Z7H3 387 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 CNGA4Q8IV77 575 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 NAA15Q9BXJ9 866 aaKnown RBP17.45■□□□□ 0.38
TPGS1-202ENST00000588278 SRP68Q9UHB9 627 aaKnown RBP17.45■□□□□ 0.38
TPGS1-202ENST00000588278 SUFUQ9UMX1 484 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 ABCA3Q99758 1704 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 MYH8P13535 1937 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 PAPPAQ13219 1627 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 CYP2D6P10635 497 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 MMP14P50281 582 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 KRT31Q15323 416 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 KCTD19Q17RG1 926 aaPredicted RBP17.45■□□□□ 0.38
TPGS1-202ENST00000588278 SWT1Q5T5J6 900 aaKnown RBP17.45■□□□□ 0.38
TPGS1-202ENST00000588278 MSL3Q8N5Y2 521 aaKnown RBP17.45■□□□□ 0.38
TPGS1-202ENST00000588278 CTCFLQ8NI51 663 aaPredicted RBP17.45■□□□□ 0.38
TPGS1-202ENST00000588278 CEP89Q96ST8 783 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 GRIN2DO15399 1336 aa17.45■□□□□ 0.38
TPGS1-202ENST00000588278 TRAPPC11Q7Z392 1133 aa17.44■□□□□ 0.38
TPGS1-202ENST00000588278 IQCA1Q86XH1 822 aa17.44■□□□□ 0.38
TPGS1-202ENST00000588278 ARL8AQ96BM9 186 aa17.44■□□□□ 0.38
TPGS1-202ENST00000588278 ZSCAN10Q96SZ4 725 aaPredicted RBP17.44■□□□□ 0.38
TPGS1-202ENST00000588278 ZNF652Q9Y2D9 606 aa17.44■□□□□ 0.38
TPGS1-202ENST00000588278 PRDX5P30044 214 aa17.44■□□□□ 0.38
TPGS1-202ENST00000588278 GSCP56915 257 aaPredicted RBP17.44■□□□□ 0.38
TPGS1-202ENST00000588278 MAP9Q49MG5 647 aa17.44■□□□□ 0.38
TPGS1-202ENST00000588278 FILIP1LQ4L180 1135 aa17.44■□□□□ 0.38
TPGS1-202ENST00000588278 CCDC122Q5T0U0 273 aa17.44■□□□□ 0.38
TPGS1-202ENST00000588278 MINPP1Q9UNW1 487 aa17.44■□□□□ 0.38
TPGS1-202ENST00000588278 SAR1BQ9Y6B6 198 aa17.44■□□□□ 0.38
TPGS1-202ENST00000588278 VEGFAP15692 232 aaPredicted RBP17.43■□□□□ 0.38
TPGS1-202ENST00000588278 PTPREP23469 700 aa17.43■□□□□ 0.38
TPGS1-202ENST00000588278 TMTC2Q8N394 836 aa17.43■□□□□ 0.38
TPGS1-202ENST00000588278 SHISA4Q96DD7 197 aa17.43■□□□□ 0.38
TPGS1-202ENST00000588278 FAM107BQ9H098 131 aa17.43■□□□□ 0.38
TPGS1-202ENST00000588278 EHD2Q9NZN4 543 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms