RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 KIFC2Q96AC6 838 aa16.9■□□□□ 0.3
ERCC1-205ENST00000587888 LENG1Q96BZ8 264 aaPredicted RBP16.9■□□□□ 0.3
ERCC1-205ENST00000587888 TEX13BQ9BXU2 312 aa16.9■□□□□ 0.3
ERCC1-205ENST00000587888 EPB41L4AQ9HCS5 686 aaPredicted RBP16.9■□□□□ 0.3
ERCC1-205ENST00000587888 PDLIM7Q9NR12 457 aa16.9■□□□□ 0.3
ERCC1-205ENST00000587888 PHF24Q9UPV7 400 aa16.9■□□□□ 0.3
ERCC1-205ENST00000587888 PLXNA1Q9UIW2 1896 aa16.89■□□□□ 0.29
ERCC1-205ENST00000587888 AKR1A1P14550 325 aa16.89■□□□□ 0.29
ERCC1-205ENST00000587888 IFNL3Q8IZI9 196 aa16.89■□□□□ 0.29
ERCC1-205ENST00000587888 CHMP4CQ96CF2 233 aa16.89■□□□□ 0.29
ERCC1-205ENST00000587888 CEP95Q96GE4 821 aa16.89■□□□□ 0.29
ERCC1-205ENST00000587888 SEC62Q99442 399 aaKnown RBP16.89■□□□□ 0.29
ERCC1-205ENST00000587888 ZNF287Q9HBT7 754 aa16.89■□□□□ 0.29
ERCC1-205ENST00000587888 RAVER2Q9HCJ3 691 aaKnown RBP16.89■□□□□ 0.29
ERCC1-205ENST00000587888 IGKV6D-41A0A0C4DH26 115 aa16.88■□□□□ 0.29
ERCC1-205ENST00000587888 SNAI1O95863 264 aaPredicted RBP16.88■□□□□ 0.29
ERCC1-205ENST00000587888 C1orf53Q5VUE5 145 aa16.88■□□□□ 0.29
ERCC1-205ENST00000587888 FAM109BQ6ICB4 259 aaPredicted RBP16.88■□□□□ 0.29
ERCC1-205ENST00000587888 LRRC47Q8N1G4 583 aaKnown RBP16.88■□□□□ 0.29
ERCC1-205ENST00000587888 MTMR4Q9NYA4 1195 aa16.88■□□□□ 0.29
ERCC1-205ENST00000587888 ZHX1Q9UKY1 873 aaPredicted RBP16.88■□□□□ 0.29
ERCC1-205ENST00000587888 FAM184BQ9ULE4 1060 aa16.88■□□□□ 0.29
ERCC1-205ENST00000587888 ISY1Q9ULR0 285 aaKnown RBP16.88■□□□□ 0.29
ERCC1-205ENST00000587888 TACC3Q9Y6A5 838 aa16.88■□□□□ 0.29
ERCC1-205ENST00000587888 A0A1W2PQ45 241 aaPredicted RBP16.87■□□□□ 0.29
ERCC1-205ENST00000587888 A0A1W2PQY0 241 aa16.87■□□□□ 0.29
ERCC1-205ENST00000587888 PQBP1O60828 265 aaKnown RBP16.87■□□□□ 0.29
ERCC1-205ENST00000587888 TSPY3P0CV98 308 aa16.87■□□□□ 0.29
ERCC1-205ENST00000587888 TSPY8P0CW00 308 aa16.87■□□□□ 0.29
ERCC1-205ENST00000587888 LRRFIP1Q32MZ4 808 aaKnown RBP16.87■□□□□ 0.29
ERCC1-205ENST00000587888 ZNF697Q5TEC3 545 aa16.87■□□□□ 0.29
ERCC1-205ENST00000587888 ANKRD35Q8N283 1001 aa16.87■□□□□ 0.29
ERCC1-205ENST00000587888 MKL1Q969V6 931 aa16.87■□□□□ 0.29
ERCC1-205ENST00000587888 GUCD1Q96NT3 240 aa16.87■□□□□ 0.29
ERCC1-205ENST00000587888 NACAP1Q9BZK3 213 aa16.87■□□□□ 0.29
ERCC1-205ENST00000587888 FEM1BQ9UK73 627 aa16.87■□□□□ 0.29
ERCC1-205ENST00000587888 ROBO3Q96MS0 1386 aa16.87■□□□□ 0.29
ERCC1-205ENST00000587888 LTBP2Q14767 1821 aa16.86■□□□□ 0.29
ERCC1-205ENST00000587888 GREB1LQ9C091 1923 aaPredicted RBP16.86■□□□□ 0.29
ERCC1-205ENST00000587888 TTLL1O95922 423 aa16.86■□□□□ 0.29
ERCC1-205ENST00000587888 CLTBP09497 229 aa16.86■□□□□ 0.29
ERCC1-205ENST00000587888 ITGB8P26012 769 aa16.86■□□□□ 0.29
ERCC1-205ENST00000587888 ACLYP53396 1101 aa16.86■□□□□ 0.29
ERCC1-205ENST00000587888 TFAP4Q01664 338 aa16.86■□□□□ 0.29
ERCC1-205ENST00000587888 KCNA10Q16322 511 aa16.86■□□□□ 0.29
ERCC1-205ENST00000587888 SLFN13Q68D06 897 aa16.86■□□□□ 0.29
ERCC1-205ENST00000587888 MSL3Q8N5Y2 521 aaKnown RBP16.86■□□□□ 0.29
ERCC1-205ENST00000587888 OTUD7AQ8TE49 926 aaPredicted RBP16.86■□□□□ 0.29
ERCC1-205ENST00000587888 FSD1Q9BTV5 496 aa16.86■□□□□ 0.29
ERCC1-205ENST00000587888 DNAJC25-GNG10A0A024R161 153 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 ATP2A1O14983 1001 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 ERC2O15083 957 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 ADAMTS4O75173 837 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 BMP3P12645 472 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 RAG1P15918 1043 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 PDE4BQ07343 736 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 MAMDC4Q6UXC1 1216 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 NEDD1Q8NHV4 660 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 NUP133Q8WUM0 1156 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 TSEN34Q9BSV6 310 aaKnown RBP16.85■□□□□ 0.29
ERCC1-205ENST00000587888 NAPBQ9H115 298 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 SLC38A10Q9HBR0 1119 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 STARD7Q9NQZ5 370 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 HOMER2Q9NSB8 354 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 TMEM39AQ9NV64 488 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 PCDHB15Q9Y5E8 787 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 TTC41PQ6P2S7 1318 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 SYNGAP1Q96PV0 1343 aa16.85■□□□□ 0.29
ERCC1-205ENST00000587888 MYH4Q9Y623 1939 aa16.84■□□□□ 0.29
ERCC1-205ENST00000587888 DNAH12Q6ZR08 3092 aa16.84■□□□□ 0.29
ERCC1-205ENST00000587888 TMEM232C9JQI7 657 aa16.84■□□□□ 0.29
ERCC1-205ENST00000587888 SLC3A2P08195 630 aaKnown RBP16.84■□□□□ 0.29
ERCC1-205ENST00000587888 IRX5P78411 483 aaPredicted RBP16.84■□□□□ 0.29
ERCC1-205ENST00000587888 ACVR2BQ13705 512 aa16.84■□□□□ 0.29
ERCC1-205ENST00000587888 GMCL1P1Q8NEA9 526 aa16.84■□□□□ 0.29
ERCC1-205ENST00000587888 PI4K2BQ8TCG2 481 aa16.84■□□□□ 0.29
ERCC1-205ENST00000587888 VTI1AQ96AJ9 217 aa16.84■□□□□ 0.29
ERCC1-205ENST00000587888 SEMA6BQ9H3T3 888 aa16.84■□□□□ 0.29
ERCC1-205ENST00000587888 SYNRGQ9UMZ2 1314 aa16.84■□□□□ 0.29
ERCC1-205ENST00000587888 MYADML2A6NDP7 307 aa16.83■□□□□ 0.28
ERCC1-205ENST00000587888 DCDC2CA8MYV0 355 aa16.83■□□□□ 0.28
ERCC1-205ENST00000587888 DUSP11O75319 330 aaKnown RBP16.83■□□□□ 0.28
ERCC1-205ENST00000587888 EPHB4P54760 987 aa16.83■□□□□ 0.28
ERCC1-205ENST00000587888 CNTN2Q02246 1040 aa16.83■□□□□ 0.28
ERCC1-205ENST00000587888 PPARAQ07869 468 aa16.83■□□□□ 0.28
ERCC1-205ENST00000587888 IKQ13123 557 aaPredicted RBP16.83■□□□□ 0.28
ERCC1-205ENST00000587888 ZMYM1Q5SVZ6 1142 aa16.83■□□□□ 0.28
ERCC1-205ENST00000587888 KLHDC9Q8NEP7 349 aa16.83■□□□□ 0.28
ERCC1-205ENST00000587888 CHST13Q8NET6 341 aa16.83■□□□□ 0.28
ERCC1-205ENST00000587888 CDX2Q99626 313 aaPredicted RBP16.83■□□□□ 0.28
ERCC1-205ENST00000587888 INCENPQ9NQS7 918 aa16.83■□□□□ 0.28
ERCC1-205ENST00000587888 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.83■□□□□ 0.28
ERCC1-205ENST00000587888 FBXO40Q9UH90 709 aa16.83■□□□□ 0.28
ERCC1-205ENST00000587888 LAMA3Q16787 3333 aa16.82■□□□□ 0.28
ERCC1-205ENST00000587888 KIAA0355O15063 1070 aa16.82■□□□□ 0.28
ERCC1-205ENST00000587888 C6orf222P0C671 652 aaPredicted RBP16.82■□□□□ 0.28
ERCC1-205ENST00000587888 MCCP23508 829 aa16.82■□□□□ 0.28
ERCC1-205ENST00000587888 CTDSPL2Q05D32 466 aa16.82■□□□□ 0.28
ERCC1-205ENST00000587888 FAAP100Q0VG06 881 aa16.82■□□□□ 0.28
ERCC1-205ENST00000587888 CCDC144BQ3MJ40 725 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms