RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 RASGRP2Q7LDG7 609 aa18.12■□□□□ 0.49
PRKCSH-204ENST00000587290 ZNF444Q8N0Y2 327 aaPredicted RBP18.12■□□□□ 0.49
PRKCSH-204ENST00000587290 INCENPQ9NQS7 918 aa18.12■□□□□ 0.49
PRKCSH-204ENST00000587290 MTMR4Q9NYA4 1195 aa18.12■□□□□ 0.49
PRKCSH-204ENST00000587290 PRKAG2Q9UGJ0 569 aa18.12■□□□□ 0.49
PRKCSH-204ENST00000587290 TTC41PQ6P2S7 1318 aa18.12■□□□□ 0.49
PRKCSH-204ENST00000587290 EYSQ5T1H1 3165 aa18.11■□□□□ 0.49
PRKCSH-204ENST00000587290 PATL2C9JE40 543 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-204ENST00000587290 FOXP2O15409 715 aa18.11■□□□□ 0.49
PRKCSH-204ENST00000587290 RARBP10826 455 aa18.11■□□□□ 0.49
PRKCSH-204ENST00000587290 IRX5P78411 483 aaPredicted RBP18.11■□□□□ 0.49
PRKCSH-204ENST00000587290 ZMYM1Q5SVZ6 1142 aa18.11■□□□□ 0.49
PRKCSH-204ENST00000587290 PDLIM7Q9NR12 457 aa18.11■□□□□ 0.49
PRKCSH-204ENST00000587290 MTMR10Q9NXD2 777 aa18.11■□□□□ 0.49
PRKCSH-204ENST00000587290 ISY1Q9ULR0 285 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-204ENST00000587290 MX1P20591 662 aa18.1■□□□□ 0.49
PRKCSH-204ENST00000587290 SNX17Q15036 470 aa18.1■□□□□ 0.49
PRKCSH-204ENST00000587290 C9orf50Q5SZB4 431 aa18.1■□□□□ 0.49
PRKCSH-204ENST00000587290 PRPF38AQ8NAV1 312 aaKnown RBP18.1■□□□□ 0.49
PRKCSH-204ENST00000587290 SLC17A8Q8NDX2 589 aa18.1■□□□□ 0.49
PRKCSH-204ENST00000587290 BADQ92934 168 aa18.1■□□□□ 0.49
PRKCSH-204ENST00000587290 DDX11Q96FC9 970 aa18.1■□□□□ 0.49
PRKCSH-204ENST00000587290 FAM161BQ96MY7 647 aa18.1■□□□□ 0.49
PRKCSH-204ENST00000587290 CRBNQ96SW2 442 aa18.1■□□□□ 0.49
PRKCSH-204ENST00000587290 NAPBQ9H115 298 aa18.1■□□□□ 0.49
PRKCSH-204ENST00000587290 HOMER2Q9NSB8 354 aa18.1■□□□□ 0.49
PRKCSH-204ENST00000587290 TACC3Q9Y6A5 838 aa18.1■□□□□ 0.49
PRKCSH-204ENST00000587290 A0A0C4DFX4 3053 aa18.1■□□□□ 0.49
PRKCSH-204ENST00000587290 UNC80Q8N2C7 3258 aa18.1■□□□□ 0.49
PRKCSH-204ENST00000587290 PLIN4Q96Q06 1357 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 SALL3Q9BXA9 1300 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 TRIM43BA6NCK2 446 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 ERC2O15083 957 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 SNAI1O95863 264 aaPredicted RBP18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 TTLL1O95922 423 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 TSPY3P0CV98 308 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 TSPY8P0CW00 308 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 COPB2P35606 906 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 RRP1P56182 461 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 TLE2Q04725 743 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 CTDSPL2Q05D32 466 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 PPARAQ07869 468 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 SLFN13Q68D06 897 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 GPR153Q6NV75 609 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 TRIM43Q96BQ3 446 aaPredicted RBP18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 FGD4Q96M96 766 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 SLC38A10Q9HBR0 1119 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 ZHX1Q9UKY1 873 aaPredicted RBP18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 PHF24Q9UPV7 400 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 DIS3Q9Y2L1 958 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 LCTP09848 1927 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 LRRC37A2A6NM11 1700 aa18.09■□□□□ 0.49
PRKCSH-204ENST00000587290 SYNRGQ9UMZ2 1314 aa18.08■□□□□ 0.49
PRKCSH-204ENST00000587290 DNAJC25-GNG10A0A024R161 153 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 A0A1W2PQ45 241 aaPredicted RBP18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 A0A1W2PQY0 241 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 MYADML2A6NDP7 307 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 ADCY6O43306 1168 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 NMT2O60551 498 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 ZBED4O75132 1171 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 ADAMTS4O75173 837 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 AKR1A1P14550 325 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 ITGB8P26012 769 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 TFAP4Q01664 338 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 SHHQ15465 462 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 VPS53Q5VIR6 699 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 NEDD1Q8NHV4 660 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 MKL1Q969V6 931 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 NACAP1Q9BZK3 213 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 NRBP1Q9UHY1 535 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 CNPY2Q9Y2B0 182 aa18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 CTDP1Q9Y5B0 961 aaPredicted RBP18.08■□□□□ 0.48
PRKCSH-204ENST00000587290 PQBP1O60828 265 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-204ENST00000587290 BMP3P12645 472 aa18.07■□□□□ 0.48
PRKCSH-204ENST00000587290 SNAP25P60880 206 aa18.07■□□□□ 0.48
PRKCSH-204ENST00000587290 LRRFIP1Q32MZ4 808 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-204ENST00000587290 RNF180Q86T96 592 aa18.07■□□□□ 0.48
PRKCSH-204ENST00000587290 GMCL1P1Q8NEA9 526 aa18.07■□□□□ 0.48
PRKCSH-204ENST00000587290 ZNF287Q9HBT7 754 aa18.07■□□□□ 0.48
PRKCSH-204ENST00000587290 FEM1BQ9UK73 627 aa18.07■□□□□ 0.48
PRKCSH-204ENST00000587290 MTMR7Q9Y216 660 aa18.07■□□□□ 0.48
PRKCSH-204ENST00000587290 DDX49Q9Y6V7 483 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-204ENST00000587290 TMEM232C9JQI7 657 aa18.06■□□□□ 0.48
PRKCSH-204ENST00000587290 ATP2A1O14983 1001 aa18.06■□□□□ 0.48
PRKCSH-204ENST00000587290 PDE4BQ07343 736 aa18.06■□□□□ 0.48
PRKCSH-204ENST00000587290 ANKRD45Q5TZF3 282 aa18.06■□□□□ 0.48
PRKCSH-204ENST00000587290 ANKRD35Q8N283 1001 aa18.06■□□□□ 0.48
PRKCSH-204ENST00000587290 SYNGAP1Q96PV0 1343 aa18.05■□□□□ 0.48
PRKCSH-204ENST00000587290 PTGS1P23219 599 aa18.05■□□□□ 0.48
PRKCSH-204ENST00000587290 MCCP23508 829 aa18.05■□□□□ 0.48
PRKCSH-204ENST00000587290 EPHB4P54760 987 aa18.05■□□□□ 0.48
PRKCSH-204ENST00000587290 CNTN2Q02246 1040 aa18.05■□□□□ 0.48
PRKCSH-204ENST00000587290 IKQ13123 557 aaPredicted RBP18.05■□□□□ 0.48
PRKCSH-204ENST00000587290 KCTD1Q719H9 257 aa18.05■□□□□ 0.48
PRKCSH-204ENST00000587290 AGBL1Q96MI9 1066 aa18.05■□□□□ 0.48
PRKCSH-204ENST00000587290 GUCD1Q96NT3 240 aa18.05■□□□□ 0.48
PRKCSH-204ENST00000587290 IL17RBQ9NRM6 502 aa18.05■□□□□ 0.48
PRKCSH-204ENST00000587290 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.05■□□□□ 0.48
PRKCSH-204ENST00000587290 STX8Q9UNK0 236 aa18.05■□□□□ 0.48
PRKCSH-204ENST00000587290 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms