RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 DNM1LO00429 736 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 PRKAB2O43741 272 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 HOXC6P09630 235 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 TAL1P17542 331 aaPredicted RBP9.32□□□□□ -0.92
VMP1-204ENST00000587259 USP14P54578 494 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 EPHB4P54760 987 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 GABPAQ06546 454 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 ZNF697Q5TEC3 545 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 LBX2Q6XYB7 198 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 SIAH1Q8IUQ4 282 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 LCORLQ8N3X6 602 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 SPATC1LQ9H0A9 340 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 EHD4Q9H223 541 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 TTYH1Q9H313 450 aaPredicted RBP9.32□□□□□ -0.92
VMP1-204ENST00000587259 CABP5Q9NP86 173 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 ECHDC1Q9NTX5 307 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 GINM1Q9NU53 330 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 MCM9Q9NXL9 1143 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 CDH23Q9H251 3354 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 TRIM6-TRIM34B2RNG4 842 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 SNPHO15079 494 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 PGK1P00558 417 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 PGK2P07205 417 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 AKR1B1P15121 316 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 PDE6AP16499 860 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 MCCP23508 829 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 MAP3K12Q12852 859 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 LRRC41Q15345 812 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 TTC6Q86TZ1 520 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 NCAPG2Q86XI2 1143 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 MAFAQ8NHW3 353 aaPredicted RBP9.31□□□□□ -0.92
VMP1-204ENST00000587259 RUFY2Q8WXA3 655 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 DNAJC2Q99543 621 aaKnown RBP9.31□□□□□ -0.92
VMP1-204ENST00000587259 SEMA6BQ9H3T3 888 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 ARMT1Q9H993 441 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 PDLIM7Q9NR12 457 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 FBXO28Q9NVF7 368 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 PRKAG2Q9UGJ0 569 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 RLFQ13129 1914 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 ZNF532Q9HCE3 1301 aa9.31□□□□□ -0.92
VMP1-204ENST00000587259 NAV1Q8NEY1 1877 aa9.3□□□□□ -0.92
VMP1-204ENST00000587259 SPTBN5Q9NRC6 3674 aaKnown RBP9.3□□□□□ -0.92
VMP1-204ENST00000587259 KBTBD13C9JR72 458 aa9.3□□□□□ -0.92
VMP1-204ENST00000587259 GOLIM4O00461 696 aa9.3□□□□□ -0.92
VMP1-204ENST00000587259 FLOT1O75955 427 aa9.3□□□□□ -0.92
VMP1-204ENST00000587259 TLE2Q04725 743 aa9.3□□□□□ -0.92
VMP1-204ENST00000587259 COG2Q14746 738 aa9.3□□□□□ -0.92
VMP1-204ENST00000587259 SLC9C2Q5TAH2 1124 aa9.3□□□□□ -0.92
VMP1-204ENST00000587259 FAM109BQ6ICB4 259 aaPredicted RBP9.3□□□□□ -0.92
VMP1-204ENST00000587259 STK11IPQ8N1F8 1099 aa9.3□□□□□ -0.92
VMP1-204ENST00000587259 OTUD7AQ8TE49 926 aaPredicted RBP9.3□□□□□ -0.92
VMP1-204ENST00000587259 MARVELD3Q96A59 401 aa9.3□□□□□ -0.92
VMP1-204ENST00000587259 MAML3Q96JK9 1138 aa9.3□□□□□ -0.92
VMP1-204ENST00000587259 TCRBV5S4A2TA0A5A2 114 aa9.29□□□□□ -0.92
VMP1-204ENST00000587259 SEPT4O43236 478 aa9.29□□□□□ -0.92
VMP1-204ENST00000587259 RAD21O60216 631 aa9.29□□□□□ -0.92
VMP1-204ENST00000587259 MSCO60682 206 aa9.29□□□□□ -0.92
VMP1-204ENST00000587259 TMEM132BQ14DG7 1078 aa9.29□□□□□ -0.92
VMP1-204ENST00000587259 OLFML2BQ68BL8 750 aa9.29□□□□□ -0.92
VMP1-204ENST00000587259 USP38Q8NB14 1042 aa9.29□□□□□ -0.92
VMP1-204ENST00000587259 PI4K2BQ8TCG2 481 aa9.29□□□□□ -0.92
VMP1-204ENST00000587259 EVI5LQ96CN4 794 aa9.29□□□□□ -0.92
VMP1-204ENST00000587259 DCP1AQ9NPI6 582 aaPredicted RBP9.29□□□□□ -0.92
VMP1-204ENST00000587259 RAD50Q92878 1312 aa9.29□□□□□ -0.92
VMP1-204ENST00000587259 A0A0G2JMZ2 1700 aa9.28□□□□□ -0.92
VMP1-204ENST00000587259 PQBP1O60828 265 aaKnown RBP9.28□□□□□ -0.92
VMP1-204ENST00000587259 MBD4O95243 580 aa9.28□□□□□ -0.92
VMP1-204ENST00000587259 ICA1Q05084 483 aa9.28□□□□□ -0.92
VMP1-204ENST00000587259 SNX17Q15036 470 aa9.28□□□□□ -0.92
VMP1-204ENST00000587259 LRRFIP1Q32MZ4 808 aaKnown RBP9.28□□□□□ -0.92
VMP1-204ENST00000587259 HSCBQ8IWL3 235 aa9.28□□□□□ -0.92
VMP1-204ENST00000587259 ARRDC4Q8NCT1 418 aa9.28□□□□□ -0.92
VMP1-204ENST00000587259 RILPL2Q969X0 211 aa9.28□□□□□ -0.92
VMP1-204ENST00000587259 NUP88Q99567 741 aaPredicted RBP9.28□□□□□ -0.92
VMP1-204ENST00000587259 CRNKL1Q9BZJ0 848 aaKnown RBP9.28□□□□□ -0.92
VMP1-204ENST00000587259 XPNPEP3Q9NQH7 507 aa9.28□□□□□ -0.92
VMP1-204ENST00000587259 PRDM6Q9NQX0 595 aa9.28□□□□□ -0.92
VMP1-204ENST00000587259 HOXC10Q9NYD6 342 aa9.28□□□□□ -0.92
VMP1-204ENST00000587259 SMCHD1A6NHR9 2005 aa9.27□□□□□ -0.92
VMP1-204ENST00000587259 ZNF236Q9UL36 1845 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 MYADML2A6NDP7 307 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 RBAK-RBAKDNI3L0D1 243 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 EEF2P13639 858 aaKnown RBP9.27□□□□□ -0.93
VMP1-204ENST00000587259 FOSL2P15408 326 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 SLC4A3P48751 1232 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 ANAPC15P60006 121 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 GRIN2CQ14957 1233 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 RABEP1Q15276 862 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 TMEM179Q6ZVK1 233 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.27□□□□□ -0.93
VMP1-204ENST00000587259 SNX21Q969T3 373 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 CHMP4CQ96CF2 233 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 RNPC3Q96LT9 517 aaKnown RBP9.27□□□□□ -0.93
VMP1-204ENST00000587259 MMP19Q99542 508 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 ESYT1Q9BSJ8 1104 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 BOLA2Q9H3K6 86 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 VCPKMTQ9H867 229 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 DIAPH3Q9NSV4 1193 aa9.27□□□□□ -0.93
VMP1-204ENST00000587259 COL11A1P12107 1806 aaPredicted RBP9.26□□□□□ -0.93
VMP1-204ENST00000587259 A0A1W2PQ45 241 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms