RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 KIFC2Q96AC6 838 aa18.72■□□□□ 0.59
VAT1-205ENST00000587173 LENG1Q96BZ8 264 aaPredicted RBP18.72■□□□□ 0.59
VAT1-205ENST00000587173 DDX11Q96FC9 970 aa18.72■□□□□ 0.59
VAT1-205ENST00000587173 CEP95Q96GE4 821 aa18.72■□□□□ 0.59
VAT1-205ENST00000587173 COL11A1P12107 1806 aaPredicted RBP18.72■□□□□ 0.59
VAT1-205ENST00000587173 COL6A3P12111 3177 aa18.71■□□□□ 0.59
VAT1-205ENST00000587173 DNAH12Q6ZR08 3092 aa18.71■□□□□ 0.59
VAT1-205ENST00000587173 TRIM43BA6NCK2 446 aa18.71■□□□□ 0.59
VAT1-205ENST00000587173 PATL2C9JE40 543 aaKnown RBP18.71■□□□□ 0.59
VAT1-205ENST00000587173 DLL1O00548 723 aa18.71■□□□□ 0.59
VAT1-205ENST00000587173 ZBED4O75132 1171 aa18.71■□□□□ 0.59
VAT1-205ENST00000587173 IFNL3Q8IZI9 196 aa18.71■□□□□ 0.59
VAT1-205ENST00000587173 CPXCR1Q8N123 301 aa18.71■□□□□ 0.59
VAT1-205ENST00000587173 LRRC47Q8N1G4 583 aaKnown RBP18.71■□□□□ 0.59
VAT1-205ENST00000587173 TRIM43Q96BQ3 446 aaPredicted RBP18.71■□□□□ 0.59
VAT1-205ENST00000587173 NACAP1Q9BZK3 213 aa18.71■□□□□ 0.59
VAT1-205ENST00000587173 MTMR4Q9NYA4 1195 aa18.71■□□□□ 0.59
VAT1-205ENST00000587173 POTEB2H3BUK9 544 aa18.7■□□□□ 0.58
VAT1-205ENST00000587173 ATP2A1O14983 1001 aa18.7■□□□□ 0.58
VAT1-205ENST00000587173 TTLL1O95922 423 aa18.7■□□□□ 0.58
VAT1-205ENST00000587173 TLE2Q04725 743 aa18.7■□□□□ 0.58
VAT1-205ENST00000587173 SHHQ15465 462 aa18.7■□□□□ 0.58
VAT1-205ENST00000587173 FAM109BQ6ICB4 259 aaPredicted RBP18.7■□□□□ 0.58
VAT1-205ENST00000587173 MSL3Q8N5Y2 521 aaKnown RBP18.7■□□□□ 0.58
VAT1-205ENST00000587173 MKL1Q969V6 931 aa18.7■□□□□ 0.58
VAT1-205ENST00000587173 SEC62Q99442 399 aaKnown RBP18.7■□□□□ 0.58
VAT1-205ENST00000587173 RAVER2Q9HCJ3 691 aaKnown RBP18.7■□□□□ 0.58
VAT1-205ENST00000587173 FEM1BQ9UK73 627 aa18.7■□□□□ 0.58
VAT1-205ENST00000587173 SYNPO2Q9UMS6 1093 aa18.7■□□□□ 0.58
VAT1-205ENST00000587173 SYNGAP1Q96PV0 1343 aa18.7■□□□□ 0.58
VAT1-205ENST00000587173 LTBP2Q14767 1821 aa18.7■□□□□ 0.58
VAT1-205ENST00000587173 DNAJC25-GNG10A0A024R161 153 aa18.69■□□□□ 0.58
VAT1-205ENST00000587173 A0A1W2PQ45 241 aaPredicted RBP18.69■□□□□ 0.58
VAT1-205ENST00000587173 A0A1W2PQY0 241 aa18.69■□□□□ 0.58
VAT1-205ENST00000587173 SNAI1O95863 264 aaPredicted RBP18.69■□□□□ 0.58
VAT1-205ENST00000587173 SLC3A2P08195 630 aaKnown RBP18.69■□□□□ 0.58
VAT1-205ENST00000587173 TSPY3P0CV98 308 aa18.69■□□□□ 0.58
VAT1-205ENST00000587173 TSPY8P0CW00 308 aa18.69■□□□□ 0.58
VAT1-205ENST00000587173 C9orf50Q5SZB4 431 aa18.69■□□□□ 0.58
VAT1-205ENST00000587173 PI4K2BQ8TCG2 481 aa18.69■□□□□ 0.58
VAT1-205ENST00000587173 OTUD7AQ8TE49 926 aaPredicted RBP18.69■□□□□ 0.58
VAT1-205ENST00000587173 FSD1Q9BTV5 496 aa18.69■□□□□ 0.58
VAT1-205ENST00000587173 SLC38A10Q9HBR0 1119 aa18.69■□□□□ 0.58
VAT1-205ENST00000587173 ZHX1Q9UKY1 873 aaPredicted RBP18.69■□□□□ 0.58
VAT1-205ENST00000587173 FAM184BQ9ULE4 1060 aa18.69■□□□□ 0.58
VAT1-205ENST00000587173 PCDHB15Q9Y5E8 787 aa18.69■□□□□ 0.58
VAT1-205ENST00000587173 PLIN4Q96Q06 1357 aa18.68■□□□□ 0.58
VAT1-205ENST00000587173 ADAMTS4O75173 837 aa18.68■□□□□ 0.58
VAT1-205ENST00000587173 CLTBP09497 229 aa18.68■□□□□ 0.58
VAT1-205ENST00000587173 PDE4BQ07343 736 aa18.68■□□□□ 0.58
VAT1-205ENST00000587173 ZNF697Q5TEC3 545 aa18.68■□□□□ 0.58
VAT1-205ENST00000587173 SLFN13Q68D06 897 aa18.68■□□□□ 0.58
VAT1-205ENST00000587173 MAMDC4Q6UXC1 1216 aa18.68■□□□□ 0.58
VAT1-205ENST00000587173 GMCL1P1Q8NEA9 526 aa18.68■□□□□ 0.58
VAT1-205ENST00000587173 NEDD1Q8NHV4 660 aa18.68■□□□□ 0.58
VAT1-205ENST00000587173 FAM161BQ96MY7 647 aa18.68■□□□□ 0.58
VAT1-205ENST00000587173 GUCD1Q96NT3 240 aa18.68■□□□□ 0.58
VAT1-205ENST00000587173 NAPBQ9H115 298 aa18.68■□□□□ 0.58
VAT1-205ENST00000587173 TACC3Q9Y6A5 838 aa18.68■□□□□ 0.58
VAT1-205ENST00000587173 SYNRGQ9UMZ2 1314 aa18.68■□□□□ 0.58
VAT1-205ENST00000587173 PQBP1O60828 265 aaKnown RBP18.67■□□□□ 0.58
VAT1-205ENST00000587173 PPARAQ07869 468 aa18.67■□□□□ 0.58
VAT1-205ENST00000587173 ZMYM1Q5SVZ6 1142 aa18.67■□□□□ 0.58
VAT1-205ENST00000587173 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.67■□□□□ 0.58
VAT1-205ENST00000587173 ZNF467Q7Z7K2 595 aaPredicted RBP18.67■□□□□ 0.58
VAT1-205ENST00000587173 ANKRD35Q8N283 1001 aa18.67■□□□□ 0.58
VAT1-205ENST00000587173 TSEN34Q9BSV6 310 aaKnown RBP18.67■□□□□ 0.58
VAT1-205ENST00000587173 FBXO40Q9UH90 709 aa18.67■□□□□ 0.58
VAT1-205ENST00000587173 ISY1Q9ULR0 285 aaKnown RBP18.67■□□□□ 0.58
VAT1-205ENST00000587173 BMP3P12645 472 aa18.66■□□□□ 0.58
VAT1-205ENST00000587173 ITGB8P26012 769 aa18.66■□□□□ 0.58
VAT1-205ENST00000587173 OAZ1P54368 228 aa18.66■□□□□ 0.58
VAT1-205ENST00000587173 TFAP4Q01664 338 aa18.66■□□□□ 0.58
VAT1-205ENST00000587173 CHST13Q8NET6 341 aa18.66■□□□□ 0.58
VAT1-205ENST00000587173 STARD7Q9NQZ5 370 aa18.66■□□□□ 0.58
VAT1-205ENST00000587173 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.66■□□□□ 0.58
VAT1-205ENST00000587173 ZNFX1Q9P2E3 1918 aaKnown RBP18.65■□□□□ 0.58
VAT1-205ENST00000587173 MX1P20591 662 aa18.65■□□□□ 0.58
VAT1-205ENST00000587173 ACLYP53396 1101 aa18.65■□□□□ 0.58
VAT1-205ENST00000587173 ACVR2BQ13705 512 aa18.65■□□□□ 0.58
VAT1-205ENST00000587173 KLHDC9Q8NEP7 349 aa18.65■□□□□ 0.58
VAT1-205ENST00000587173 NUP133Q8WUM0 1156 aa18.65■□□□□ 0.58
VAT1-205ENST00000587173 FGD4Q96M96 766 aa18.65■□□□□ 0.58
VAT1-205ENST00000587173 HOMER2Q9NSB8 354 aa18.65■□□□□ 0.58
VAT1-205ENST00000587173 PLXNA1Q9UIW2 1896 aa18.65■□□□□ 0.58
VAT1-205ENST00000587173 MYADML2A6NDP7 307 aa18.64■□□□□ 0.57
VAT1-205ENST00000587173 MOXD2PA6NHM9 499 aa18.64■□□□□ 0.57
VAT1-205ENST00000587173 TMEM232C9JQI7 657 aa18.64■□□□□ 0.57
VAT1-205ENST00000587173 KIAA0355O15063 1070 aa18.64■□□□□ 0.57
VAT1-205ENST00000587173 DUSP11O75319 330 aaKnown RBP18.64■□□□□ 0.57
VAT1-205ENST00000587173 RAG1P15918 1043 aa18.64■□□□□ 0.57
VAT1-205ENST00000587173 STAT2P52630 851 aa18.64■□□□□ 0.57
VAT1-205ENST00000587173 RRP1P56182 461 aaKnown RBP18.64■□□□□ 0.57
VAT1-205ENST00000587173 KCNA10Q16322 511 aa18.64■□□□□ 0.57
VAT1-205ENST00000587173 CCDC129Q6ZRS4 1044 aa18.64■□□□□ 0.57
VAT1-205ENST00000587173 ARMCX2Q7L311 632 aa18.64■□□□□ 0.57
VAT1-205ENST00000587173 CHMP4CQ96CF2 233 aa18.64■□□□□ 0.57
VAT1-205ENST00000587173 TMEM39AQ9NV64 488 aa18.64■□□□□ 0.57
VAT1-205ENST00000587173 FDX1P10109 184 aa18.63■□□□□ 0.57
VAT1-205ENST00000587173 SLC1A4P43007 532 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms