RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 SLC38A10Q9HBR0 1119 aa16.2■□□□□ 0.18
PRKCSH-202ENST00000585540 GJD2Q9UKL4 321 aa16.2■□□□□ 0.18
PRKCSH-202ENST00000585540 ZNF214Q9UL59 606 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-202ENST00000585540 WDR19Q8NEZ3 1342 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 TMEM232C9JQI7 657 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 HOXC6P09630 235 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 PDHBP11177 359 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 PTPREP23469 700 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 STAT3P40763 770 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 IKQ13123 557 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 MAP2K5Q13163 448 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 GRB14Q14449 540 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 TMEM132BQ14DG7 1078 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 CCDC96Q2M329 555 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 ASPRV1Q53RT3 343 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 MORN1Q5T089 497 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 CREB3L3Q68CJ9 461 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 POTEEQ6S8J3 1075 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 TMTC2Q8N394 836 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 ENAHQ8N8S7 591 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 PNMA1Q8ND90 353 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 TMEM87BQ96K49 555 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 PORCNQ9H237 461 aa16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 COL11A1P12107 1806 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-202ENST00000585540 DOCK3Q8IZD9 2030 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 PLXNB2O15031 1838 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 CCDC85CA6NKD9 419 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 SLC27A2O14975 620 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 ADCY3O60266 1144 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 HMGCRP04035 888 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 HMGB1P09429 215 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 ERCC3P19447 782 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 MCCP23508 829 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 MCM5P33992 734 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 ZNF543Q08ER8 600 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 MB21D2Q8IYB1 491 aaPredicted RBP16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 CHST13Q8NET6 341 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 USP6NLQ92738 828 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 KIFC2Q96AC6 838 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 NUP88Q99567 741 aaPredicted RBP16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 TMEM106CQ9BVX2 250 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 MAF1Q9H063 256 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 FBXO28Q9NVF7 368 aa16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 ISY1Q9ULR0 285 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-202ENST00000585540 PLS1Q14651 629 aa16.17■□□□□ 0.18
PRKCSH-202ENST00000585540 SEC23AQ15436 765 aa16.17■□□□□ 0.18
PRKCSH-202ENST00000585540 NCAPG2Q86XI2 1143 aa16.17■□□□□ 0.18
PRKCSH-202ENST00000585540 NKX2-3Q8TAU0 364 aa16.17■□□□□ 0.18
PRKCSH-202ENST00000585540 MAP3K14Q99558 947 aa16.17■□□□□ 0.18
PRKCSH-202ENST00000585540 GABRQQ9UN88 632 aa16.17■□□□□ 0.18
PRKCSH-202ENST00000585540 DIS3Q9Y2L1 958 aaKnown RBP16.17■□□□□ 0.18
PRKCSH-202ENST00000585540 IFIT3O14879 490 aaKnown RBP16.16■□□□□ 0.18
PRKCSH-202ENST00000585540 FCER1AP12319 257 aa16.16■□□□□ 0.18
PRKCSH-202ENST00000585540 WTAPQ15007 396 aa16.16■□□□□ 0.18
PRKCSH-202ENST00000585540 SYDE2Q5VT97 1194 aa16.16■□□□□ 0.18
PRKCSH-202ENST00000585540 WDR78Q5VTH9 848 aa16.16■□□□□ 0.18
PRKCSH-202ENST00000585540 RANBP17Q9H2T7 1088 aaKnown RBP16.16■□□□□ 0.18
PRKCSH-202ENST00000585540 PARP1P09874 1014 aaKnown RBP16.15■□□□□ 0.18
PRKCSH-202ENST00000585540 LIFRP42702 1097 aa16.15■□□□□ 0.18
PRKCSH-202ENST00000585540 TRAF1Q13077 416 aa16.15■□□□□ 0.18
PRKCSH-202ENST00000585540 KCTD2Q14681 263 aa16.15■□□□□ 0.18
PRKCSH-202ENST00000585540 SNRNP48Q6IEG0 339 aaKnown RBP16.15■□□□□ 0.18
PRKCSH-202ENST00000585540 STOX1Q6ZVD7 989 aa16.15■□□□□ 0.18
PRKCSH-202ENST00000585540 KCTD1Q719H9 257 aa16.15■□□□□ 0.18
PRKCSH-202ENST00000585540 CYB5R4Q7L1T6 521 aa16.15■□□□□ 0.18
PRKCSH-202ENST00000585540 MSL3Q8N5Y2 521 aaKnown RBP16.15■□□□□ 0.18
PRKCSH-202ENST00000585540 ZKSCAN3Q9BRR0 538 aa16.15■□□□□ 0.18
PRKCSH-202ENST00000585540 PRR12Q9ULL5 1215 aa16.15■□□□□ 0.18
PRKCSH-202ENST00000585540 DDAH1O94760 285 aa16.14■□□□□ 0.17
PRKCSH-202ENST00000585540 OLFML2BQ68BL8 750 aa16.14■□□□□ 0.17
PRKCSH-202ENST00000585540 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.17
PRKCSH-202ENST00000585540 KCNB2Q92953 911 aa16.14■□□□□ 0.17
PRKCSH-202ENST00000585540 NEK1Q96PY6 1258 aa16.14■□□□□ 0.17
PRKCSH-202ENST00000585540 MMP19Q99542 508 aa16.14■□□□□ 0.17
PRKCSH-202ENST00000585540 BIN2Q9UBW5 565 aaPredicted RBP16.14■□□□□ 0.17
PRKCSH-202ENST00000585540 NRBP1Q9UHY1 535 aa16.14■□□□□ 0.17
PRKCSH-202ENST00000585540 INHAP05111 366 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 ICAM1P05362 532 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 CALM1P0DP23 149 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 CALM2P0DP24 149 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 CALM3P0DP25 149 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 CYP2B6P20813 491 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 ADORA2AP29274 412 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 HSPA4P34932 840 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 RGS19P49795 217 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 TMEM67Q5HYA8 995 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 MFSD14CQ5VZR4 134 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 CATIPQ7Z7H3 387 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 DPP9Q86TI2 863 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 SH3TC2Q8TF17 1288 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 ACAD9Q9H845 621 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 TAF6LQ9Y6J9 622 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 PFASO15067 1338 aa16.13■□□□□ 0.17
PRKCSH-202ENST00000585540 LOC102724159A0A0B4J2E5 919 aa16.12■□□□□ 0.17
PRKCSH-202ENST00000585540 PSMA5P28066 241 aa16.12■□□□□ 0.17
PRKCSH-202ENST00000585540 GNAQP50148 359 aa16.12■□□□□ 0.17
PRKCSH-202ENST00000585540 PWP2Q15269 919 aaKnown RBP16.12■□□□□ 0.17
PRKCSH-202ENST00000585540 ZNF467Q7Z7K2 595 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-202ENST00000585540 CPXCR1Q8N123 301 aa16.12■□□□□ 0.17
PRKCSH-202ENST00000585540 IGDCC4Q8TDY8 1250 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms