RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 ATG4CQ96DT6 458 aa27.16■■□□□ 1.94
LSM7-202ENST00000585395 TCP11L1Q9NUJ3 509 aa27.16■■□□□ 1.94
LSM7-202ENST00000585395 CTDP1Q9Y5B0 961 aaPredicted RBP27.16■■□□□ 1.94
LSM7-202ENST00000585395 UNC80Q8N2C7 3258 aa27.15■■□□□ 1.94
LSM7-202ENST00000585395 F5H6K3 240 aa27.15■■□□□ 1.94
LSM7-202ENST00000585395 RGS2P41220 211 aa27.15■■□□□ 1.94
LSM7-202ENST00000585395 KLRC3Q07444 240 aa27.15■■□□□ 1.94
LSM7-202ENST00000585395 C7orf61Q8IZ16 206 aa27.15■■□□□ 1.94
LSM7-202ENST00000585395 NCOA7Q8NI08 942 aa27.15■■□□□ 1.94
LSM7-202ENST00000585395 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.15■■□□□ 1.94
LSM7-202ENST00000585395 INCENPQ9NQS7 918 aa27.15■■□□□ 1.94
LSM7-202ENST00000585395 STX8Q9UNK0 236 aa27.15■■□□□ 1.94
LSM7-202ENST00000585395 NEDD4P46934 1319 aa27.15■■□□□ 1.94
LSM7-202ENST00000585395 NDUFB10O96000 172 aa27.14■■□□□ 1.94
LSM7-202ENST00000585395 NECTIN1Q15223 517 aa27.14■■□□□ 1.94
LSM7-202ENST00000585395 CREB3L3Q68CJ9 461 aa27.14■■□□□ 1.94
LSM7-202ENST00000585395 DIS3LQ8TF46 1054 aaKnown RBP27.14■■□□□ 1.94
LSM7-202ENST00000585395 NUP88Q99567 741 aaPredicted RBP27.14■■□□□ 1.94
LSM7-202ENST00000585395 SPATC1LQ9H0A9 340 aa27.14■■□□□ 1.94
LSM7-202ENST00000585395 GJD2Q9UKL4 321 aa27.14■■□□□ 1.94
LSM7-202ENST00000585395 KDM4AO75164 1064 aa27.13■■□□□ 1.93
LSM7-202ENST00000585395 HMGCRP04035 888 aa27.13■■□□□ 1.93
LSM7-202ENST00000585395 MCCP23508 829 aa27.13■■□□□ 1.93
LSM7-202ENST00000585395 POTEEQ6S8J3 1075 aa27.13■■□□□ 1.93
LSM7-202ENST00000585395 NCAPG2Q86XI2 1143 aa27.13■■□□□ 1.93
LSM7-202ENST00000585395 MKL1Q969V6 931 aa27.13■■□□□ 1.93
LSM7-202ENST00000585395 TTC14Q96N46 770 aa27.13■■□□□ 1.93
LSM7-202ENST00000585395 FBXO28Q9NVF7 368 aa27.13■■□□□ 1.93
LSM7-202ENST00000585395 PARP14Q460N5 1801 aa27.13■■□□□ 1.93
LSM7-202ENST00000585395 RLFQ13129 1914 aa27.12■■□□□ 1.93
LSM7-202ENST00000585395 PLXNB2O15031 1838 aa27.12■■□□□ 1.93
LSM7-202ENST00000585395 B4E1Z4 1266 aa27.12■■□□□ 1.93
LSM7-202ENST00000585395 E7EWF7 191 aa27.12■■□□□ 1.93
LSM7-202ENST00000585395 SLC27A2O14975 620 aa27.12■■□□□ 1.93
LSM7-202ENST00000585395 KRT32Q14532 448 aa27.12■■□□□ 1.93
LSM7-202ENST00000585395 Q7L0L9 218 aa27.12■■□□□ 1.93
LSM7-202ENST00000585395 SLF1Q9BQI6 1058 aa27.12■■□□□ 1.93
LSM7-202ENST00000585395 UBAC1Q9BSL1 405 aa27.12■■□□□ 1.93
LSM7-202ENST00000585395 MOV10L1Q9BXT6 1211 aaKnown RBP27.12■■□□□ 1.93
LSM7-202ENST00000585395 MTMR10Q9NXD2 777 aa27.12■■□□□ 1.93
LSM7-202ENST00000585395 ZMYND8Q9ULU4 1186 aaPredicted RBP27.12■■□□□ 1.93
LSM7-202ENST00000585395 A0A0G2JMZ2 1700 aa27.12■■□□□ 1.93
LSM7-202ENST00000585395 IKQ13123 557 aaPredicted RBP27.11■■□□□ 1.93
LSM7-202ENST00000585395 SART3Q15020 963 aaKnown RBP27.11■■□□□ 1.93
LSM7-202ENST00000585395 SLFN13Q68D06 897 aa27.11■■□□□ 1.93
LSM7-202ENST00000585395 TRMT44Q8IYL2 757 aaKnown RBP27.11■■□□□ 1.93
LSM7-202ENST00000585395 TDHQ8IZJ6 230 aa27.11■■□□□ 1.93
LSM7-202ENST00000585395 APBA2Q99767 749 aa27.11■■□□□ 1.93
LSM7-202ENST00000585395 PPP1R9AQ9ULJ8 1098 aa27.11■■□□□ 1.93
LSM7-202ENST00000585395 TACC3Q9Y6A5 838 aa27.11■■□□□ 1.93
LSM7-202ENST00000585395 COL11A1P12107 1806 aaPredicted RBP27.11■■□□□ 1.93
LSM7-202ENST00000585395 SLC15A5A6NIM6 579 aa27.1■■□□□ 1.93
LSM7-202ENST00000585395 MAP2K5Q13163 448 aa27.1■■□□□ 1.93
LSM7-202ENST00000585395 GMCL1P1Q8NEA9 526 aa27.1■■□□□ 1.93
LSM7-202ENST00000585395 MTMR7Q9Y216 660 aa27.1■■□□□ 1.93
LSM7-202ENST00000585395 ERICH2A1L162 156 aa27.09■■□□□ 1.93
LSM7-202ENST00000585395 TOP1P11387 765 aaKnown RBP27.09■■□□□ 1.93
LSM7-202ENST00000585395 ERCC3P19447 782 aa27.09■■□□□ 1.93
LSM7-202ENST00000585395 PTPREP23469 700 aa27.09■■□□□ 1.93
LSM7-202ENST00000585395 DGKHQ86XP1 1220 aa27.09■■□□□ 1.93
LSM7-202ENST00000585395 CHMP4CQ96CF2 233 aa27.09■■□□□ 1.93
LSM7-202ENST00000585395 NMT2O60551 498 aa27.08■■□□□ 1.93
LSM7-202ENST00000585395 XRCC5P13010 732 aaKnown RBP27.08■■□□□ 1.93
LSM7-202ENST00000585395 MAGEA10P43363 369 aaPredicted RBP27.08■■□□□ 1.93
LSM7-202ENST00000585395 MORN1Q5T089 497 aa27.08■■□□□ 1.93
LSM7-202ENST00000585395 SHCBP1Q8NEM2 672 aa27.08■■□□□ 1.93
LSM7-202ENST00000585395 KIFC2Q96AC6 838 aa27.08■■□□□ 1.93
LSM7-202ENST00000585395 ZSCAN10Q96SZ4 725 aaPredicted RBP27.08■■□□□ 1.93
LSM7-202ENST00000585395 MROH8Q9H579 483 aa27.08■■□□□ 1.93
LSM7-202ENST00000585395 IL17RBQ9NRM6 502 aa27.08■■□□□ 1.93
LSM7-202ENST00000585395 ZSWIM5Q9P217 1185 aa27.08■■□□□ 1.93
LSM7-202ENST00000585395 VWA5AO00534 786 aa27.07■■□□□ 1.92
LSM7-202ENST00000585395 BMP3P12645 472 aa27.07■■□□□ 1.92
LSM7-202ENST00000585395 SLC1A4P43007 532 aa27.07■■□□□ 1.92
LSM7-202ENST00000585395 DPP9Q86TI2 863 aa27.07■■□□□ 1.92
LSM7-202ENST00000585395 PRPF38AQ8NAV1 312 aaKnown RBP27.07■■□□□ 1.92
LSM7-202ENST00000585395 TRIB2Q92519 343 aa27.07■■□□□ 1.92
LSM7-202ENST00000585395 HMX1Q9NP08 348 aaPredicted RBP27.07■■□□□ 1.92
LSM7-202ENST00000585395 FEM1BQ9UK73 627 aa27.07■■□□□ 1.92
LSM7-202ENST00000585395 RPTORQ8N122 1335 aa27.07■■□□□ 1.92
LSM7-202ENST00000585395 ZBED4O75132 1171 aa27.06■■□□□ 1.92
LSM7-202ENST00000585395 SLC25A27O95847 323 aa27.06■■□□□ 1.92
LSM7-202ENST00000585395 NOVP48745 357 aa27.06■■□□□ 1.92
LSM7-202ENST00000585395 SLC4A3P48751 1232 aa27.06■■□□□ 1.92
LSM7-202ENST00000585395 TMEM132BQ14DG7 1078 aa27.06■■□□□ 1.92
LSM7-202ENST00000585395 TSGA10IPQ3SY00 556 aa27.06■■□□□ 1.92
LSM7-202ENST00000585395 MTA3Q9BTC8 594 aa27.06■■□□□ 1.92
LSM7-202ENST00000585395 C11orf49Q9H6J7 331 aa27.06■■□□□ 1.92
LSM7-202ENST00000585395 SLC5A4Q9NY91 659 aa27.06■■□□□ 1.92
LSM7-202ENST00000585395 STRNO43815 780 aa27.05■■□□□ 1.92
LSM7-202ENST00000585395 HSPA4P34932 840 aa27.05■■□□□ 1.92
LSM7-202ENST00000585395 COPB2P35606 906 aa27.05■■□□□ 1.92
LSM7-202ENST00000585395 STAT3P40763 770 aa27.05■■□□□ 1.92
LSM7-202ENST00000585395 GRB14Q14449 540 aa27.05■■□□□ 1.92
LSM7-202ENST00000585395 CCDC96Q2M329 555 aa27.05■■□□□ 1.92
LSM7-202ENST00000585395 COL25A1Q9BXS0 654 aaPredicted RBP27.05■■□□□ 1.92
LSM7-202ENST00000585395 UBE2OQ9C0C9 1292 aaKnown RBP27.05■■□□□ 1.92
LSM7-202ENST00000585395 TMEM232C9JQI7 657 aa27.04■■□□□ 1.92
LSM7-202ENST00000585395 HMGB1P09429 215 aaKnown RBP27.04■■□□□ 1.92
LSM7-202ENST00000585395 SYN1P17600 705 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms