RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 HOXA7P31268 230 aaPredicted RBP14.97□□□□□ -0.01
TRIM47-202ENST00000585333 ADD1P35611 737 aaKnown RBP14.97□□□□□ -0.01
TRIM47-202ENST00000585333 IRX3P78415 501 aaPredicted RBP14.97□□□□□ -0.01
TRIM47-202ENST00000585333 FAM83BQ5T0W9 1011 aa14.97□□□□□ -0.01
TRIM47-202ENST00000585333 SYDE2Q5VT97 1194 aa14.97□□□□□ -0.01
TRIM47-202ENST00000585333 GADL1Q6ZQY3 521 aa14.97□□□□□ -0.01
TRIM47-202ENST00000585333 SPICE1Q8N0Z3 855 aa14.97□□□□□ -0.01
TRIM47-202ENST00000585333 NSUN7Q8NE18 718 aaKnown RBP14.97□□□□□ -0.01
TRIM47-202ENST00000585333 CCDC148Q8NFR7 591 aa14.97□□□□□ -0.01
TRIM47-202ENST00000585333 SMARCC2Q8TAQ2 1214 aa14.97□□□□□ -0.01
TRIM47-202ENST00000585333 GLT8D2Q9H1C3 349 aa14.97□□□□□ -0.01
TRIM47-202ENST00000585333 RPAP3Q9H6T3 665 aaPredicted RBP14.97□□□□□ -0.01
TRIM47-202ENST00000585333 RIOX1Q9H6W3 641 aa14.97□□□□□ -0.01
TRIM47-202ENST00000585333 NCOA5Q9HCD5 579 aaKnown RBP14.97□□□□□ -0.01
TRIM47-202ENST00000585333 GPCPD1Q9NPB8 672 aa14.97□□□□□ -0.01
TRIM47-202ENST00000585333 EMILIN3Q9NT22 766 aa14.97□□□□□ -0.01
TRIM47-202ENST00000585333 PHIPQ8WWQ0 1821 aa14.96□□□□□ -0.01
TRIM47-202ENST00000585333 FRMPD2Q68DX3 1309 aaPredicted RBP14.96□□□□□ -0.01
TRIM47-202ENST00000585333 FLOT1O75955 427 aa14.96□□□□□ -0.01
TRIM47-202ENST00000585333 HSPA6P17066 643 aa14.96□□□□□ -0.01
TRIM47-202ENST00000585333 FMR1Q06787 632 aaKnown RBP eCLIP14.96□□□□□ -0.01
TRIM47-202ENST00000585333 NOGQ13253 232 aa14.96□□□□□ -0.01
TRIM47-202ENST00000585333 COG2Q14746 738 aa14.96□□□□□ -0.01
TRIM47-202ENST00000585333 NTRK3Q16288 839 aa14.96□□□□□ -0.01
TRIM47-202ENST00000585333 KCTD1Q719H9 257 aa14.96□□□□□ -0.01
TRIM47-202ENST00000585333 CCDC84Q86UT8 332 aaPredicted RBP14.96□□□□□ -0.01
TRIM47-202ENST00000585333 RASAL3Q86YV0 1011 aa14.96□□□□□ -0.01
TRIM47-202ENST00000585333 SLC26A6Q9BXS9 759 aa14.96□□□□□ -0.01
TRIM47-202ENST00000585333 MAF1Q9H063 256 aa14.96□□□□□ -0.01
TRIM47-202ENST00000585333 FAM217BQ9NTX9 383 aaPredicted RBP14.96□□□□□ -0.01
TRIM47-202ENST00000585333 ORC3Q9UBD5 711 aaPredicted RBP14.96□□□□□ -0.01
TRIM47-202ENST00000585333 CNTNAP5Q8WYK1 1306 aa14.95□□□□□ -0.02
TRIM47-202ENST00000585333 CCL15-CCL14A0A0B4J2E2 113 aa14.95□□□□□ -0.02
TRIM47-202ENST00000585333 PNMA6FA0A0J9YX94 578 aa14.95□□□□□ -0.02
TRIM47-202ENST00000585333 ZBED4O75132 1171 aa14.95□□□□□ -0.02
TRIM47-202ENST00000585333 COPB2P35606 906 aa14.95□□□□□ -0.02
TRIM47-202ENST00000585333 OAZ1P54368 228 aa14.95□□□□□ -0.02
TRIM47-202ENST00000585333 CCL15Q16663 113 aa14.95□□□□□ -0.02
TRIM47-202ENST00000585333 PPP1R18Q6NYC8 613 aa14.95□□□□□ -0.02
TRIM47-202ENST00000585333 CATSPERGQ6ZRH7 1159 aa14.95□□□□□ -0.02
TRIM47-202ENST00000585333 ANKRD23Q86SG2 305 aa14.95□□□□□ -0.02
TRIM47-202ENST00000585333 RAB11FIP4Q86YS3 637 aa14.95□□□□□ -0.02
TRIM47-202ENST00000585333 BRMS1Q9HCU9 246 aa14.95□□□□□ -0.02
TRIM47-202ENST00000585333 SH3GLB2Q9NR46 395 aa14.95□□□□□ -0.02
TRIM47-202ENST00000585333 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.95□□□□□ -0.02
TRIM47-202ENST00000585333 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.95□□□□□ -0.02
TRIM47-202ENST00000585333 PPP1R9AQ9ULJ8 1098 aa14.95□□□□□ -0.02
TRIM47-202ENST00000585333 CIZ1Q9ULV3 898 aaPredicted RBP14.95□□□□□ -0.02
TRIM47-202ENST00000585333 LOC285556D6RIA3 1793 aa14.95□□□□□ -0.02
TRIM47-202ENST00000585333 RASSF10A6NK89 507 aa14.94□□□□□ -0.02
TRIM47-202ENST00000585333 ZBTB5O15062 677 aa14.94□□□□□ -0.02
TRIM47-202ENST00000585333 PLEKHA8P1O95397 391 aa14.94□□□□□ -0.02
TRIM47-202ENST00000585333 ALDH1A1P00352 501 aa14.94□□□□□ -0.02
TRIM47-202ENST00000585333 GOLGA8HP0CJ92 632 aa14.94□□□□□ -0.02
TRIM47-202ENST00000585333 SCG2P13521 617 aa14.94□□□□□ -0.02
TRIM47-202ENST00000585333 GJB2P29033 226 aa14.94□□□□□ -0.02
TRIM47-202ENST00000585333 SAFBQ15424 915 aaKnown RBP eCLIP14.94□□□□□ -0.02
TRIM47-202ENST00000585333 DEFB115Q30KQ5 88 aa14.94□□□□□ -0.02
TRIM47-202ENST00000585333 MCTP2Q6DN12 878 aa14.94□□□□□ -0.02
TRIM47-202ENST00000585333 GALNT17Q6IS24 598 aa14.94□□□□□ -0.02
TRIM47-202ENST00000585333 PAXIP1Q6ZW49 1069 aaPredicted RBP14.94□□□□□ -0.02
TRIM47-202ENST00000585333 ADGRF4Q8IZF3 695 aa14.94□□□□□ -0.02
TRIM47-202ENST00000585333 STAG2Q8N3U4 1231 aa14.94□□□□□ -0.02
TRIM47-202ENST00000585333 SRBD1Q8N5C6 995 aaKnown RBP14.94□□□□□ -0.02
TRIM47-202ENST00000585333 PARK7Q99497 189 aaKnown RBP14.94□□□□□ -0.02
TRIM47-202ENST00000585333 TESPA1A2RU30 521 aaPredicted RBP14.93□□□□□ -0.02
TRIM47-202ENST00000585333 H3BQV1 296 aa14.93□□□□□ -0.02
TRIM47-202ENST00000585333 CALML3P27482 149 aa14.93□□□□□ -0.02
TRIM47-202ENST00000585333 FUT2Q10981 343 aa14.93□□□□□ -0.02
TRIM47-202ENST00000585333 PFKFB3Q16875 520 aaPredicted RBP14.93□□□□□ -0.02
TRIM47-202ENST00000585333 LBX2Q6XYB7 198 aa14.93□□□□□ -0.02
TRIM47-202ENST00000585333 NBPF11Q86T75 865 aa14.93□□□□□ -0.02
TRIM47-202ENST00000585333 BICD2Q8TD16 824 aa14.93□□□□□ -0.02
TRIM47-202ENST00000585333 KIFC2Q96AC6 838 aa14.93□□□□□ -0.02
TRIM47-202ENST00000585333 MTMR8Q96EF0 704 aa14.93□□□□□ -0.02
TRIM47-202ENST00000585333 NUP88Q99567 741 aaPredicted RBP14.93□□□□□ -0.02
TRIM47-202ENST00000585333 AMNQ9BXJ7 453 aa14.93□□□□□ -0.02
TRIM47-202ENST00000585333 PRR12Q9ULL5 1215 aa14.93□□□□□ -0.02
TRIM47-202ENST00000585333 V9GY48 417 aaPredicted RBP14.93□□□□□ -0.02
TRIM47-202ENST00000585333 GNA11P29992 359 aa14.92□□□□□ -0.02
TRIM47-202ENST00000585333 DSG3P32926 999 aa14.92□□□□□ -0.02
TRIM47-202ENST00000585333 GCLCP48506 637 aaPredicted RBP14.92□□□□□ -0.02
TRIM47-202ENST00000585333 NUCB2P80303 420 aa14.92□□□□□ -0.02
TRIM47-202ENST00000585333 CDC37Q16543 378 aaPredicted RBP14.92□□□□□ -0.02
TRIM47-202ENST00000585333 TKFCQ3LXA3 575 aa14.92□□□□□ -0.02
TRIM47-202ENST00000585333 LARP1BQ659C4 914 aaKnown RBP14.92□□□□□ -0.02
TRIM47-202ENST00000585333 FBXO11Q86XK2 927 aa14.92□□□□□ -0.02
TRIM47-202ENST00000585333 CCDC82Q8N4S0 544 aa14.92□□□□□ -0.02
TRIM47-202ENST00000585333 SAMD3Q8N6K7 520 aa14.92□□□□□ -0.02
TRIM47-202ENST00000585333 CNKSR2Q8WXI2 1034 aa14.92□□□□□ -0.02
TRIM47-202ENST00000585333 PHKBQ93100 1093 aa14.92□□□□□ -0.02
TRIM47-202ENST00000585333 MS4A4AQ96JQ5 239 aa14.92□□□□□ -0.02
TRIM47-202ENST00000585333 C8orf76Q96K31 380 aa14.92□□□□□ -0.02
TRIM47-202ENST00000585333 ALG1Q9BT22 464 aa14.92□□□□□ -0.02
TRIM47-202ENST00000585333 UBA5Q9GZZ9 404 aa14.92□□□□□ -0.02
TRIM47-202ENST00000585333 RANBP17Q9H2T7 1088 aaKnown RBP14.92□□□□□ -0.02
TRIM47-202ENST00000585333 JMJD4Q9H9V9 463 aa14.92□□□□□ -0.02
TRIM47-202ENST00000585333 PTPRFP10586 1907 aa14.92□□□□□ -0.02
TRIM47-202ENST00000585333 ATP2A1O14983 1001 aa14.91□□□□□ -0.02
TRIM47-202ENST00000585333 CTDNEP1O95476 244 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms