RNA–Protein interactions for RNA: ENST00000585098.5

NDEL1-219, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3 BASIC

Gene NDEL1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-219ENST00000585098 ZKSCAN1P17029 563 aaPredicted RBP27.86■■■□□ 2.05
NDEL1-219ENST00000585098 TRIM32Q13049 653 aa27.86■■■□□ 2.05
NDEL1-219ENST00000585098 CCL14Q16627 93 aa27.86■■■□□ 2.05
NDEL1-219ENST00000585098 FAM160B2Q86V87 743 aa27.86■■■□□ 2.05
NDEL1-219ENST00000585098 TRMT44Q8IYL2 757 aaKnown RBP27.86■■■□□ 2.05
NDEL1-219ENST00000585098 CHURC1Q8WUH1 139 aa27.86■■■□□ 2.05
NDEL1-219ENST00000585098 DCAF4Q8WV16 495 aa27.86■■■□□ 2.05
NDEL1-219ENST00000585098 MAP4K1Q92918 833 aa27.86■■■□□ 2.05
NDEL1-219ENST00000585098 ZSWIM5Q9P217 1185 aa27.86■■■□□ 2.05
NDEL1-219ENST00000585098 CYP21A2P08686 494 aa27.85■■■□□ 2.05
NDEL1-219ENST00000585098 ADORA2AP29274 412 aa27.85■■■□□ 2.05
NDEL1-219ENST00000585098 CCDC96Q2M329 555 aa27.85■■■□□ 2.05
NDEL1-219ENST00000585098 CPXCR1Q8N123 301 aa27.85■■■□□ 2.05
NDEL1-219ENST00000585098 TEX13BQ9BXU2 312 aa27.85■■■□□ 2.05
NDEL1-219ENST00000585098 SLC38A10Q9HBR0 1119 aa27.85■■■□□ 2.05
NDEL1-219ENST00000585098 RBBP6Q7Z6E9 1792 aaKnown RBP27.84■■■□□ 2.05
NDEL1-219ENST00000585098 COL11A1P12107 1806 aaPredicted RBP27.84■■■□□ 2.05
NDEL1-219ENST00000585098 GJB1P08034 283 aa27.84■■■□□ 2.05
NDEL1-219ENST00000585098 CCDC178Q5BJE1 867 aa27.84■■■□□ 2.05
NDEL1-219ENST00000585098 ERICH6BQ5W0A0 696 aa27.84■■■□□ 2.05
NDEL1-219ENST00000585098 SNRNP48Q6IEG0 339 aaKnown RBP27.84■■■□□ 2.05
NDEL1-219ENST00000585098 DPP9Q86TI2 863 aa27.84■■■□□ 2.05
NDEL1-219ENST00000585098 DGKHQ86XP1 1220 aa27.84■■■□□ 2.05
NDEL1-219ENST00000585098 ZSCAN10Q96SZ4 725 aaPredicted RBP27.84■■■□□ 2.05
NDEL1-219ENST00000585098 PPP4R2Q9NY27 417 aa27.84■■■□□ 2.05
NDEL1-219ENST00000585098 RBM8AQ9Y5S9 174 aaKnown RBP27.84■■■□□ 2.05
NDEL1-219ENST00000585098 BRCA2P51587 3418 aa27.83■■■□□ 2.05
NDEL1-219ENST00000585098 PLA2G6O60733 806 aa27.83■■■□□ 2.05
NDEL1-219ENST00000585098 HOXC6P09630 235 aa27.83■■■□□ 2.05
NDEL1-219ENST00000585098 FCER1AP12319 257 aa27.83■■■□□ 2.05
NDEL1-219ENST00000585098 COPB2P35606 906 aa27.83■■■□□ 2.05
NDEL1-219ENST00000585098 ABRAQ8N0Z2 381 aa27.83■■■□□ 2.05
NDEL1-219ENST00000585098 NPLOC4Q8TAT6 608 aa27.83■■■□□ 2.05
NDEL1-219ENST00000585098 RAVER2Q9HCJ3 691 aaKnown RBP27.83■■■□□ 2.05
NDEL1-219ENST00000585098 KIAA0100Q14667 2235 aaKnown RBP27.82■■■□□ 2.04
NDEL1-219ENST00000585098 ATP2A1O14983 1001 aa27.82■■■□□ 2.04
NDEL1-219ENST00000585098 FDX1P10109 184 aa27.82■■■□□ 2.04
NDEL1-219ENST00000585098 SLC4A3P48751 1232 aa27.82■■■□□ 2.04
NDEL1-219ENST00000585098 TRDNQ13061 729 aa27.82■■■□□ 2.04
NDEL1-219ENST00000585098 LSG1Q9H089 658 aaKnown RBP27.82■■■□□ 2.04
NDEL1-219ENST00000585098 RIPK3Q9Y572 518 aa27.82■■■□□ 2.04
NDEL1-219ENST00000585098 TAF6LQ9Y6J9 622 aa27.82■■■□□ 2.04
NDEL1-219ENST00000585098 PDHBP11177 359 aa27.81■■■□□ 2.04
NDEL1-219ENST00000585098 PRKAR2AP13861 404 aaKnown RBP27.81■■■□□ 2.04
NDEL1-219ENST00000585098 GJA8P48165 433 aa27.81■■■□□ 2.04
NDEL1-219ENST00000585098 MMP19Q99542 508 aa27.81■■■□□ 2.04
NDEL1-219ENST00000585098 UBAC1Q9BSL1 405 aa27.81■■■□□ 2.04
NDEL1-219ENST00000585098 HMX1Q9NP08 348 aaPredicted RBP27.81■■■□□ 2.04
NDEL1-219ENST00000585098 FLRT1Q9NZU1 646 aa27.81■■■□□ 2.04
NDEL1-219ENST00000585098 FRMPD2Q68DX3 1309 aaPredicted RBP27.81■■■□□ 2.04
NDEL1-219ENST00000585098 RPTORQ8N122 1335 aa27.81■■■□□ 2.04
NDEL1-219ENST00000585098 E7EWF7 191 aa27.8■■■□□ 2.04
NDEL1-219ENST00000585098 COBLO75128 1261 aa27.8■■■□□ 2.04
NDEL1-219ENST00000585098 CDC45O75419 566 aa27.8■■■□□ 2.04
NDEL1-219ENST00000585098 OAZ1P54368 228 aa27.8■■■□□ 2.04
NDEL1-219ENST00000585098 MAP3K21Q5TCX8 1036 aa27.8■■■□□ 2.04
NDEL1-219ENST00000585098 TTBK2Q6IQ55 1244 aa27.8■■■□□ 2.04
NDEL1-219ENST00000585098 ENAHQ8N8S7 591 aaPredicted RBP27.8■■■□□ 2.04
NDEL1-219ENST00000585098 ANKS1AQ92625 1134 aa27.8■■■□□ 2.04
NDEL1-219ENST00000585098 DEFB118Q96PH6 123 aa27.8■■■□□ 2.04
NDEL1-219ENST00000585098 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.8■■■□□ 2.04
NDEL1-219ENST00000585098 GPCPD1Q9NPB8 672 aa27.8■■■□□ 2.04
NDEL1-219ENST00000585098 ANO2Q9NQ90 1003 aa27.8■■■□□ 2.04
NDEL1-219ENST00000585098 PAK6Q9NQU5 681 aaPredicted RBP27.8■■■□□ 2.04
NDEL1-219ENST00000585098 PRR12Q9ULL5 1215 aa27.8■■■□□ 2.04
NDEL1-219ENST00000585098 TNKSO95271 1327 aa27.8■■■□□ 2.04
NDEL1-219ENST00000585098 CACNB2Q08289 660 aaPredicted RBP27.79■■■□□ 2.04
NDEL1-219ENST00000585098 KCTD2Q14681 263 aa27.79■■■□□ 2.04
NDEL1-219ENST00000585098 CASC1Q6TDU7 716 aa27.79■■■□□ 2.04
NDEL1-219ENST00000585098 CYB5R4Q7L1T6 521 aa27.79■■■□□ 2.04
NDEL1-219ENST00000585098 U2AF1L4Q8WU68 220 aaKnown RBP27.79■■■□□ 2.04
NDEL1-219ENST00000585098 SHISA4Q96DD7 197 aa27.79■■■□□ 2.04
NDEL1-219ENST00000585098 KAT14Q9H8E8 782 aa27.79■■■□□ 2.04
NDEL1-219ENST00000585098 SLC5A4Q9NY91 659 aa27.79■■■□□ 2.04
NDEL1-219ENST00000585098 ZNF236Q9UL36 1845 aa27.78■■■□□ 2.04
NDEL1-219ENST00000585098 SLC16A2P36021 539 aa27.78■■■□□ 2.04
NDEL1-219ENST00000585098 SNAP25P60880 206 aa27.78■■■□□ 2.04
NDEL1-219ENST00000585098 MFSD14CQ5VZR4 134 aa27.78■■■□□ 2.04
NDEL1-219ENST00000585098 RALYLQ86SE5 291 aaKnown RBP27.78■■■□□ 2.04
NDEL1-219ENST00000585098 PNMA1Q8ND90 353 aa27.78■■■□□ 2.04
NDEL1-219ENST00000585098 SGPL1O95470 568 aa27.77■■■□□ 2.04
NDEL1-219ENST00000585098 SNHG28P0DPA3 235 aa27.77■■■□□ 2.04
NDEL1-219ENST00000585098 ZNF543Q08ER8 600 aa27.77■■■□□ 2.04
NDEL1-219ENST00000585098 BTNL9Q6UXG8 535 aa27.77■■■□□ 2.04
NDEL1-219ENST00000585098 STOX1Q6ZVD7 989 aa27.77■■■□□ 2.04
NDEL1-219ENST00000585098 NCOA7Q8NI08 942 aa27.77■■■□□ 2.04
NDEL1-219ENST00000585098 ZNF536O15090 1300 aa27.76■■■□□ 2.03
NDEL1-219ENST00000585098 PGK2P07205 417 aa27.76■■■□□ 2.03
NDEL1-219ENST00000585098 SYDE2Q5VT97 1194 aa27.76■■■□□ 2.03
NDEL1-219ENST00000585098 CCDC174Q6PII3 467 aa27.76■■■□□ 2.03
NDEL1-219ENST00000585098 CYP2C19P33261 490 aa27.75■■■□□ 2.03
NDEL1-219ENST00000585098 IFIT1BQ5T764 474 aaKnown RBP27.75■■■□□ 2.03
NDEL1-219ENST00000585098 OLFML2BQ68BL8 750 aa27.75■■■□□ 2.03
NDEL1-219ENST00000585098 AGBL1Q96MI9 1066 aa27.75■■■□□ 2.03
NDEL1-219ENST00000585098 HOMER2Q9NSB8 354 aa27.75■■■□□ 2.03
NDEL1-219ENST00000585098 TFRCP02786 760 aaKnown RBP27.74■■■□□ 2.03
NDEL1-219ENST00000585098 CCND3P30281 292 aaPredicted RBP27.74■■■□□ 2.03
NDEL1-219ENST00000585098 SEC23AQ15436 765 aa27.74■■■□□ 2.03
NDEL1-219ENST00000585098 CHST13Q8NET6 341 aa27.74■■■□□ 2.03
NDEL1-219ENST00000585098 MAML3Q96JK9 1138 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms