RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 MTMR4Q9NYA4 1195 aa17.91■□□□□ 0.46
VAPA-209ENST00000585042 FEM1BQ9UK73 627 aa17.91■□□□□ 0.46
VAPA-209ENST00000585042 TACC3Q9Y6A5 838 aa17.91■□□□□ 0.46
VAPA-209ENST00000585042 SYNGAP1Q96PV0 1343 aa17.91■□□□□ 0.46
VAPA-209ENST00000585042 SMCHD1A6NHR9 2005 aa17.91■□□□□ 0.46
VAPA-209ENST00000585042 DNAJC25-GNG10A0A024R161 153 aa17.9■□□□□ 0.46
VAPA-209ENST00000585042 NDUFB10O96000 172 aa17.9■□□□□ 0.46
VAPA-209ENST00000585042 APPP05067 770 aa17.9■□□□□ 0.46
VAPA-209ENST00000585042 ZNF865P0CJ78 1059 aaPredicted RBP17.9■□□□□ 0.46
VAPA-209ENST00000585042 TDO2P48775 406 aa17.9■□□□□ 0.46
VAPA-209ENST00000585042 OAZ1P54368 228 aa17.9■□□□□ 0.46
VAPA-209ENST00000585042 Q7L0L9 218 aa17.9■□□□□ 0.46
VAPA-209ENST00000585042 IFNL3Q8IZI9 196 aa17.9■□□□□ 0.46
VAPA-209ENST00000585042 GMCL1P1Q8NEA9 526 aa17.9■□□□□ 0.46
VAPA-209ENST00000585042 DDX11Q96FC9 970 aa17.9■□□□□ 0.46
VAPA-209ENST00000585042 FBXO40Q9UH90 709 aa17.9■□□□□ 0.46
VAPA-209ENST00000585042 PLXNA1Q9UIW2 1896 aa17.89■□□□□ 0.45
VAPA-209ENST00000585042 TTLL1O95922 423 aa17.89■□□□□ 0.45
VAPA-209ENST00000585042 MYCNP04198 464 aaPredicted RBP17.89■□□□□ 0.45
VAPA-209ENST00000585042 SLC3A2P08195 630 aaKnown RBP17.89■□□□□ 0.45
VAPA-209ENST00000585042 PDE4BQ07343 736 aa17.89■□□□□ 0.45
VAPA-209ENST00000585042 TRIM60Q495X7 471 aa17.89■□□□□ 0.45
VAPA-209ENST00000585042 PPP4R3BQ5MIZ7 849 aa17.89■□□□□ 0.45
VAPA-209ENST00000585042 SNRNP48Q6IEG0 339 aaKnown RBP17.89■□□□□ 0.45
VAPA-209ENST00000585042 EPB41L4AQ9HCS5 686 aaPredicted RBP17.89■□□□□ 0.45
VAPA-209ENST00000585042 FAM184BQ9ULE4 1060 aa17.89■□□□□ 0.45
VAPA-209ENST00000585042 CTDP1Q9Y5B0 961 aaPredicted RBP17.89■□□□□ 0.45
VAPA-209ENST00000585042 DLL1O00548 723 aa17.88■□□□□ 0.45
VAPA-209ENST00000585042 CHST13Q8NET6 341 aa17.88■□□□□ 0.45
VAPA-209ENST00000585042 NEDD1Q8NHV4 660 aa17.88■□□□□ 0.45
VAPA-209ENST00000585042 FERMT2Q96AC1 680 aa17.88■□□□□ 0.45
VAPA-209ENST00000585042 CEP95Q96GE4 821 aa17.88■□□□□ 0.45
VAPA-209ENST00000585042 NUP88Q99567 741 aaPredicted RBP17.88■□□□□ 0.45
VAPA-209ENST00000585042 SLC38A10Q9HBR0 1119 aa17.88■□□□□ 0.45
VAPA-209ENST00000585042 PDLIM7Q9NR12 457 aa17.88■□□□□ 0.45
VAPA-209ENST00000585042 LTBP2Q14767 1821 aa17.87■□□□□ 0.45
VAPA-209ENST00000585042 M0R2C6 588 aa17.87■□□□□ 0.45
VAPA-209ENST00000585042 PGK1P00558 417 aa17.87■□□□□ 0.45
VAPA-209ENST00000585042 TAL1P17542 331 aaPredicted RBP17.87■□□□□ 0.45
VAPA-209ENST00000585042 TLE2Q04725 743 aa17.87■□□□□ 0.45
VAPA-209ENST00000585042 NUP133Q8WUM0 1156 aa17.87■□□□□ 0.45
VAPA-209ENST00000585042 BADQ92934 168 aa17.87■□□□□ 0.45
VAPA-209ENST00000585042 TOX2Q96NM4 488 aa17.87■□□□□ 0.45
VAPA-209ENST00000585042 PRDM5Q9NQX1 630 aaPredicted RBP17.87■□□□□ 0.45
VAPA-209ENST00000585042 RIPK3Q9Y572 518 aa17.87■□□□□ 0.45
VAPA-209ENST00000585042 PLIN4Q96Q06 1357 aa17.87■□□□□ 0.45
VAPA-209ENST00000585042 TRIM43BA6NCK2 446 aa17.86■□□□□ 0.45
VAPA-209ENST00000585042 MOXD2PA6NHM9 499 aa17.86■□□□□ 0.45
VAPA-209ENST00000585042 ADAMTS4O75173 837 aa17.86■□□□□ 0.45
VAPA-209ENST00000585042 DUSP11O75319 330 aaKnown RBP17.86■□□□□ 0.45
VAPA-209ENST00000585042 SNAI1O95863 264 aaPredicted RBP17.86■□□□□ 0.45
VAPA-209ENST00000585042 SHHQ15465 462 aa17.86■□□□□ 0.45
VAPA-209ENST00000585042 ANKRD33Q7Z3H0 272 aa17.86■□□□□ 0.45
VAPA-209ENST00000585042 STK11IPQ8N1F8 1099 aa17.86■□□□□ 0.45
VAPA-209ENST00000585042 KLHDC9Q8NEP7 349 aa17.86■□□□□ 0.45
VAPA-209ENST00000585042 PI4K2BQ8TCG2 481 aa17.86■□□□□ 0.45
VAPA-209ENST00000585042 KIFC2Q96AC6 838 aa17.86■□□□□ 0.45
VAPA-209ENST00000585042 TRIM43Q96BQ3 446 aaPredicted RBP17.86■□□□□ 0.45
VAPA-209ENST00000585042 ABHD16BQ9H3Z7 469 aa17.86■□□□□ 0.45
VAPA-209ENST00000585042 A0A0C4DFX4 3053 aa17.85■□□□□ 0.45
VAPA-209ENST00000585042 A0A1W2PQ45 241 aaPredicted RBP17.85■□□□□ 0.45
VAPA-209ENST00000585042 A0A1W2PQY0 241 aa17.85■□□□□ 0.45
VAPA-209ENST00000585042 KIAA0355O15063 1070 aa17.85■□□□□ 0.45
VAPA-209ENST00000585042 PLA2G6O60733 806 aa17.85■□□□□ 0.45
VAPA-209ENST00000585042 CLTBP09497 229 aa17.85■□□□□ 0.45
VAPA-209ENST00000585042 TSPY3P0CV98 308 aa17.85■□□□□ 0.45
VAPA-209ENST00000585042 TSPY8P0CW00 308 aa17.85■□□□□ 0.45
VAPA-209ENST00000585042 BMP3P12645 472 aa17.85■□□□□ 0.45
VAPA-209ENST00000585042 SMAD3P84022 425 aaKnown RBP17.85■□□□□ 0.45
VAPA-209ENST00000585042 ZMYM1Q5SVZ6 1142 aa17.85■□□□□ 0.45
VAPA-209ENST00000585042 TSHZ3Q63HK5 1081 aa17.85■□□□□ 0.45
VAPA-209ENST00000585042 CPXCR1Q8N123 301 aa17.85■□□□□ 0.45
VAPA-209ENST00000585042 CHURC1Q8WUH1 139 aa17.85■□□□□ 0.45
VAPA-209ENST00000585042 MYH4Q9Y623 1939 aa17.85■□□□□ 0.45
VAPA-209ENST00000585042 PRDM1O75626 825 aa17.84■□□□□ 0.45
VAPA-209ENST00000585042 CST5P28325 142 aaPredicted RBP17.84■□□□□ 0.45
VAPA-209ENST00000585042 ACLYP53396 1101 aa17.84■□□□□ 0.45
VAPA-209ENST00000585042 TFAP4Q01664 338 aa17.84■□□□□ 0.45
VAPA-209ENST00000585042 ACVR2BQ13705 512 aa17.84■□□□□ 0.45
VAPA-209ENST00000585042 ZNF697Q5TEC3 545 aa17.84■□□□□ 0.45
VAPA-209ENST00000585042 SLFN13Q68D06 897 aa17.84■□□□□ 0.45
VAPA-209ENST00000585042 CCSAPQ6IQ19 270 aaPredicted RBP17.84■□□□□ 0.45
VAPA-209ENST00000585042 SH3RF1Q7Z6J0 888 aa17.84■□□□□ 0.45
VAPA-209ENST00000585042 FAM160B2Q86V87 743 aa17.84■□□□□ 0.45
VAPA-209ENST00000585042 TICAM2Q86XR7 235 aa17.84■□□□□ 0.45
VAPA-209ENST00000585042 ANKRD35Q8N283 1001 aa17.84■□□□□ 0.45
VAPA-209ENST00000585042 PCSK9Q8NBP7 692 aaKnown RBP17.84■□□□□ 0.45
VAPA-209ENST00000585042 GMCL1Q96IK5 515 aa17.84■□□□□ 0.45
VAPA-209ENST00000585042 NAPBQ9H115 298 aa17.84■□□□□ 0.45
VAPA-209ENST00000585042 RAVER2Q9HCJ3 691 aaKnown RBP17.84■□□□□ 0.45
VAPA-209ENST00000585042 ELP1O95163 1332 aa17.83■□□□□ 0.44
VAPA-209ENST00000585042 DCDC2CA8MYV0 355 aa17.83■□□□□ 0.44
VAPA-209ENST00000585042 STAT2P52630 851 aa17.83■□□□□ 0.44
VAPA-209ENST00000585042 PPARAQ07869 468 aa17.83■□□□□ 0.44
VAPA-209ENST00000585042 KCNA10Q16322 511 aa17.83■□□□□ 0.44
VAPA-209ENST00000585042 TKFCQ3LXA3 575 aa17.83■□□□□ 0.44
VAPA-209ENST00000585042 STAG1Q8WVM7 1258 aa17.83■□□□□ 0.44
VAPA-209ENST00000585042 FSD1Q9BTV5 496 aa17.83■□□□□ 0.44
VAPA-209ENST00000585042 SPC25Q9HBM1 224 aa17.83■□□□□ 0.44
VAPA-209ENST00000585042 PCDHB15Q9Y5E8 787 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms