RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 DEFB129Q9H1M3 183 aa17.15■□□□□ 0.34
CDK5RAP3-236ENST00000584991 STK36Q9NRP7 1315 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 SMTNL1A8MU46 457 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 SPTLC2O15270 562 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 CMA1P23946 247 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 KIF5BP33176 963 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 JAG1P78504 1218 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 GUCY1B3Q02153 619 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 GRM4Q14833 912 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 SEPT2Q15019 361 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 TMEM179Q6ZVK1 233 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 TMTC3Q6ZXV5 915 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 TRIM22Q8IYM9 498 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 LRRC47Q8N1G4 583 aaKnown RBP17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 SDF4Q9BRK5 362 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 CCDC94Q9BW85 323 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 KIAA1468Q9P260 1216 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 GH2P01242 217 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 GUCY1A2P33402 732 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 FUT2Q10981 343 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 C11orf57Q6ZUT1 292 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 RASGRP2Q7LDG7 609 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 APOBEC3FQ8IUX4 373 aaKnown RBP17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 DHX40Q8IX18 779 aaKnown RBP17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 STAG2Q8N3U4 1231 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 SRBD1Q8N5C6 995 aaKnown RBP17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 JMYQ8N9B5 988 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 ALG1Q9BT22 464 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 KANSL2Q9H9L4 492 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 CABP5Q9NP86 173 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 ADARB2Q9NS39 739 aaKnown RBP17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 GGA3Q9NZ52 723 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 MAD2L2Q9UI95 211 aa17.14■□□□□ 0.33
CDK5RAP3-236ENST00000584991 BAZ2BQ9UIF8 2168 aaKnown RBP17.13■□□□□ 0.33
CDK5RAP3-236ENST00000584991 PPP6R2O75170 966 aa17.13■□□□□ 0.33
CDK5RAP3-236ENST00000584991 TPM4P67936 248 aa17.13■□□□□ 0.33
CDK5RAP3-236ENST00000584991 PPP4R3BQ5MIZ7 849 aa17.13■□□□□ 0.33
CDK5RAP3-236ENST00000584991 OTUD7BQ6GQQ9 843 aa17.13■□□□□ 0.33
CDK5RAP3-236ENST00000584991 GJB4Q9NTQ9 266 aa17.13■□□□□ 0.33
CDK5RAP3-236ENST00000584991 KIF2AO00139 706 aaPredicted RBP17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 TUBB4AP04350 444 aa17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 EEF2P13639 858 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 MAP3K10Q02779 954 aa17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 ANO1Q5XXA6 986 aa17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 CACTINQ8WUQ7 758 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 RNF26Q9BY78 433 aaPredicted RBP17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 NRBP1Q9UHY1 535 aa17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 CNTNAP5Q8WYK1 1306 aa17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 FAM237AA0A1B0GTK4 181 aa17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 RIOK3O14730 519 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 DEXIO95424 95 aa17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 GOLGA8HP0CJ92 632 aa17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 KCNJ6P48051 423 aa17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 AKAP17AQ02040 695 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 ICA1Q05084 483 aa17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 SLC39A14Q15043 492 aa17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 NBPF12Q5TAG4 269 aaPredicted RBP17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 USP17L2Q6R6M4 530 aa17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 ELOA2Q8IYF1 753 aaPredicted RBP17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 WASF1Q92558 559 aa17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 NYAP2Q9P242 653 aa17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 V9GY48 417 aaPredicted RBP17.12■□□□□ 0.33
CDK5RAP3-236ENST00000584991 ZC3H4Q9UPT8 1303 aaKnown RBP17.11■□□□□ 0.33
CDK5RAP3-236ENST00000584991 hCG_1642624A0A1W2PR95 340 aa17.11■□□□□ 0.33
CDK5RAP3-236ENST00000584991 PALM3A6NDB9 673 aaPredicted RBP17.11■□□□□ 0.33
CDK5RAP3-236ENST00000584991 USP17L5A8MUK1 530 aa17.11■□□□□ 0.33
CDK5RAP3-236ENST00000584991 PRPF3O43395 683 aaKnown RBP17.11■□□□□ 0.33
CDK5RAP3-236ENST00000584991 PARP1P09874 1014 aaKnown RBP17.11■□□□□ 0.33
CDK5RAP3-236ENST00000584991 GNAQP50148 359 aa17.11■□□□□ 0.33
CDK5RAP3-236ENST00000584991 KIF23Q02241 960 aaPredicted RBP17.11■□□□□ 0.33
CDK5RAP3-236ENST00000584991 SIAH1Q8IUQ4 282 aa17.11■□□□□ 0.33
CDK5RAP3-236ENST00000584991 L3MBTL3Q96JM7 780 aaPredicted RBP17.11■□□□□ 0.33
CDK5RAP3-236ENST00000584991 FTOQ9C0B1 505 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDK5RAP3-236ENST00000584991 GLTPD2A6NH11 291 aa17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 PDHBP11177 359 aa17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 PRAMEF18Q5VWM3 479 aa17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 ANKRD7Q92527 254 aa17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 MKL1Q969V6 931 aa17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 ATAD5Q96QE3 1844 aa17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 KLRF2D3W0D1 207 aa17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 IKBKBO14920 756 aa17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 TNNT1P13805 278 aa17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 CAP2P40123 477 aa17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 NDUFA8P51970 172 aa17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 NLRP12P59046 1061 aa17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 LRMPQ12912 555 aa17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 ZBTB21Q9ULJ3 1066 aa17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 CLIC4Q9Y696 253 aa17.1■□□□□ 0.33
CDK5RAP3-236ENST00000584991 PHF20L1A8MW92 1017 aa17.09■□□□□ 0.33
CDK5RAP3-236ENST00000584991 ZNF202O95125 648 aa17.09■□□□□ 0.33
CDK5RAP3-236ENST00000584991 PKN1Q16512 942 aa17.09■□□□□ 0.33
CDK5RAP3-236ENST00000584991 CCDC144BQ3MJ40 725 aa17.09■□□□□ 0.33
CDK5RAP3-236ENST00000584991 AXDND1Q5T1B0 1012 aaPredicted RBP17.09■□□□□ 0.33
CDK5RAP3-236ENST00000584991 KRT40Q6A162 431 aa17.09■□□□□ 0.33
CDK5RAP3-236ENST00000584991 ZNF710Q8N1W2 664 aa17.09■□□□□ 0.33
CDK5RAP3-236ENST00000584991 FRMPD2Q68DX3 1309 aaPredicted RBP17.08■□□□□ 0.33
CDK5RAP3-236ENST00000584991 A0A1B0GVL5 298 aa17.08■□□□□ 0.33
CDK5RAP3-236ENST00000584991 NRDCO43847 1150 aa17.08■□□□□ 0.33
CDK5RAP3-236ENST00000584991 RAD21O60216 631 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms