RNA–Protein interactions for RNA: ENST00000584952.1

AC055811.3-201, humanhuman

BASIC

Gene AC055811.3, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.3-201ENST00000584952 MYH7P12883 1935 aa16.03■□□□□ 0.16
AC055811.3-201ENST00000584952 COL11A1P12107 1806 aaPredicted RBP16.03■□□□□ 0.16
AC055811.3-201ENST00000584952 ATP2A1O14983 1001 aa16.02■□□□□ 0.16
AC055811.3-201ENST00000584952 GPAA1O43292 621 aa16.02■□□□□ 0.16
AC055811.3-201ENST00000584952 ZBED4O75132 1171 aa16.02■□□□□ 0.16
AC055811.3-201ENST00000584952 PRDM1O75626 825 aa16.02■□□□□ 0.16
AC055811.3-201ENST00000584952 APPP05067 770 aa16.02■□□□□ 0.16
AC055811.3-201ENST00000584952 TDO2P48775 406 aa16.02■□□□□ 0.16
AC055811.3-201ENST00000584952 C9orf50Q5SZB4 431 aa16.02■□□□□ 0.16
AC055811.3-201ENST00000584952 MKL1Q969V6 931 aa16.02■□□□□ 0.16
AC055811.3-201ENST00000584952 DDX11Q96FC9 970 aa16.02■□□□□ 0.16
AC055811.3-201ENST00000584952 FAM161BQ96MY7 647 aa16.02■□□□□ 0.16
AC055811.3-201ENST00000584952 EPB41L4AQ9HCS5 686 aaPredicted RBP16.02■□□□□ 0.16
AC055811.3-201ENST00000584952 TACC3Q9Y6A5 838 aa16.02■□□□□ 0.16
AC055811.3-201ENST00000584952 ZNFX1Q9P2E3 1918 aaKnown RBP16.02■□□□□ 0.15
AC055811.3-201ENST00000584952 LTBP2Q14767 1821 aa16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 SYNGAP1Q96PV0 1343 aa16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 DNAJC25-GNG10A0A024R161 153 aa16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 A0A1W2PQ45 241 aaPredicted RBP16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 A0A1W2PQY0 241 aa16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 PATL2C9JE40 543 aaKnown RBP16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 M0R2C6 588 aa16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 ADAMTS4O75173 837 aa16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 SNAI1O95863 264 aaPredicted RBP16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 CLTBP09497 229 aa16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 SLC4A3P48751 1232 aa16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 MAMDC4Q6UXC1 1216 aa16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 IFNL3Q8IZI9 196 aa16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 CPXCR1Q8N123 301 aa16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 LENG1Q96BZ8 264 aaPredicted RBP16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 CEP95Q96GE4 821 aa16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 MTMR4Q9NYA4 1195 aa16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 SYNPO2Q9UMS6 1093 aa16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 GREB1LQ9C091 1923 aaPredicted RBP16.01■□□□□ 0.15
AC055811.3-201ENST00000584952 ITGB8P26012 769 aa16■□□□□ 0.15
AC055811.3-201ENST00000584952 ZNF697Q5TEC3 545 aa16■□□□□ 0.15
AC055811.3-201ENST00000584952 KIFC2Q96AC6 838 aa16■□□□□ 0.15
AC055811.3-201ENST00000584952 TSEN34Q9BSV6 310 aaKnown RBP16■□□□□ 0.15
AC055811.3-201ENST00000584952 SLC38A10Q9HBR0 1119 aa16■□□□□ 0.15
AC055811.3-201ENST00000584952 FAM184BQ9ULE4 1060 aa16■□□□□ 0.15
AC055811.3-201ENST00000584952 CTDP1Q9Y5B0 961 aaPredicted RBP16■□□□□ 0.15
AC055811.3-201ENST00000584952 KIAA0355O15063 1070 aa15.99■□□□□ 0.15
AC055811.3-201ENST00000584952 PQBP1O60828 265 aaKnown RBP15.99■□□□□ 0.15
AC055811.3-201ENST00000584952 TTLL1O95922 423 aa15.99■□□□□ 0.15
AC055811.3-201ENST00000584952 ACLYP53396 1101 aa15.99■□□□□ 0.15
AC055811.3-201ENST00000584952 LRRFIP1Q32MZ4 808 aaKnown RBP15.99■□□□□ 0.15
AC055811.3-201ENST00000584952 ZNF467Q7Z7K2 595 aaPredicted RBP15.99■□□□□ 0.15
AC055811.3-201ENST00000584952 GMCL1P1Q8NEA9 526 aa15.99■□□□□ 0.15
AC055811.3-201ENST00000584952 NACAP1Q9BZK3 213 aa15.99■□□□□ 0.15
AC055811.3-201ENST00000584952 RAVER2Q9HCJ3 691 aaKnown RBP15.99■□□□□ 0.15
AC055811.3-201ENST00000584952 FEM1BQ9UK73 627 aa15.99■□□□□ 0.15
AC055811.3-201ENST00000584952 ZHX1Q9UKY1 873 aaPredicted RBP15.99■□□□□ 0.15
AC055811.3-201ENST00000584952 SMCHD1A6NHR9 2005 aa15.99■□□□□ 0.15
AC055811.3-201ENST00000584952 TTC41PQ6P2S7 1318 aa15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 SYNRGQ9UMZ2 1314 aa15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 OAZ1P54368 228 aa15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 SMAD3P84022 425 aaKnown RBP15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 CCSAPQ6IQ19 270 aaPredicted RBP15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 ANKRD33Q7Z3H0 272 aa15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 ANKRD35Q8N283 1001 aa15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 KLHDC9Q8NEP7 349 aa15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 NEDD1Q8NHV4 660 aa15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 NUP133Q8WUM0 1156 aa15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 TOX2Q96NM4 488 aa15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 SEC62Q99442 399 aaKnown RBP15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 SEMA6BQ9H3T3 888 aa15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 STARD7Q9NQZ5 370 aa15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 FBXO40Q9UH90 709 aa15.98■□□□□ 0.15
AC055811.3-201ENST00000584952 PLXNA1Q9UIW2 1896 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 MOXD2PA6NHM9 499 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 ERC2O15083 957 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 DUSP11O75319 330 aaKnown RBP15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 TSPY3P0CV98 308 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 TSPY8P0CW00 308 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 BMP3P12645 472 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 RAG1P15918 1043 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 EPHB4P54760 987 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 PDE4BQ07343 736 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 ACVR2BQ13705 512 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 KCNA10Q16322 511 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 SLFN13Q68D06 897 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 LRRC47Q8N1G4 583 aaKnown RBP15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 CHST13Q8NET6 341 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 PI4K2BQ8TCG2 481 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 CDX2Q99626 313 aaPredicted RBP15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 ABHD16BQ9H3Z7 469 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 TMEM39AQ9NV64 488 aa15.97■□□□□ 0.15
AC055811.3-201ENST00000584952 DCDC2CA8MYV0 355 aa15.96■□□□□ 0.15
AC055811.3-201ENST00000584952 SLC3A2P08195 630 aaKnown RBP15.96■□□□□ 0.15
AC055811.3-201ENST00000584952 TFAP4Q01664 338 aa15.96■□□□□ 0.15
AC055811.3-201ENST00000584952 FAAP100Q0VG06 881 aa15.96■□□□□ 0.15
AC055811.3-201ENST00000584952 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.96■□□□□ 0.15
AC055811.3-201ENST00000584952 FGD4Q96M96 766 aa15.96■□□□□ 0.15
AC055811.3-201ENST00000584952 FSD1Q9BTV5 496 aa15.96■□□□□ 0.15
AC055811.3-201ENST00000584952 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.96■□□□□ 0.15
AC055811.3-201ENST00000584952 PCDHB15Q9Y5E8 787 aa15.96■□□□□ 0.15
AC055811.3-201ENST00000584952 PLIN4Q96Q06 1357 aa15.96■□□□□ 0.15
AC055811.3-201ENST00000584952 MYADML2A6NDP7 307 aa15.95■□□□□ 0.14
AC055811.3-201ENST00000584952 TMEM232C9JQI7 657 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms