RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 SH3TC2Q8TF17 1288 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 ANKS1AQ92625 1134 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 TCEANC2Q96MN5 208 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 P2RX7Q99572 595 aaKnown RBP16.18■□□□□ 0.18
TRAF4-215ENST00000584944 TM6SF1Q9BZW5 370 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 CPA4Q9UI42 421 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 FRMPD2Q68DX3 1309 aaPredicted RBP16.18■□□□□ 0.18
TRAF4-215ENST00000584944 SH2B2O14492 632 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-215ENST00000584944 SEC23AQ15436 765 aa16.17■□□□□ 0.18
TRAF4-215ENST00000584944 ASPRV1Q53RT3 343 aa16.17■□□□□ 0.18
TRAF4-215ENST00000584944 KIAA1755Q5JYT7 1200 aa16.17■□□□□ 0.18
TRAF4-215ENST00000584944 ANKRD13CQ8N6S4 541 aa16.17■□□□□ 0.18
TRAF4-215ENST00000584944 MB21D1Q8N884 522 aa16.17■□□□□ 0.18
TRAF4-215ENST00000584944 IGDCC4Q8TDY8 1250 aa16.17■□□□□ 0.18
TRAF4-215ENST00000584944 UPF3BQ9BZI7 483 aaKnown RBP16.17■□□□□ 0.18
TRAF4-215ENST00000584944 PDRG1Q9NUG6 133 aa16.17■□□□□ 0.18
TRAF4-215ENST00000584944 GREB1LQ9C091 1923 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-215ENST00000584944 MYH4Q9Y623 1939 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 DDAH1O94760 285 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 PDHBP11177 359 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 CPA1P15085 419 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 LIFRP42702 1097 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 PSMC4P43686 418 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 NOVP48745 357 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 SLC4A3P48751 1232 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 WDR78Q5VTH9 848 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 Q6ZUG5 572 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 ZNF654Q8IZM8 581 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 GPRC5AQ8NFJ5 357 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 TRIM47Q96LD4 638 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 LY9Q9HBG7 655 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 ZSWIM6Q9HCJ5 1215 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 SRRDQ9UH36 339 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 MYPNQ86TC9 1320 aa16.16■□□□□ 0.18
TRAF4-215ENST00000584944 LOC285556D6RIA3 1793 aa16.15■□□□□ 0.18
TRAF4-215ENST00000584944 FDX1P10109 184 aa16.15■□□□□ 0.18
TRAF4-215ENST00000584944 DSG3P32926 999 aa16.15■□□□□ 0.18
TRAF4-215ENST00000584944 EXOSC10Q01780 885 aaKnown RBP16.15■□□□□ 0.18
TRAF4-215ENST00000584944 ANKRD1Q15327 319 aa16.15■□□□□ 0.18
TRAF4-215ENST00000584944 NKX2-3Q8TAU0 364 aa16.15■□□□□ 0.18
TRAF4-215ENST00000584944 BRF1Q92994 677 aa16.15■□□□□ 0.18
TRAF4-215ENST00000584944 BACH2Q9BYV9 841 aa16.15■□□□□ 0.18
TRAF4-215ENST00000584944 PPP1R9AQ9ULJ8 1098 aa16.15■□□□□ 0.18
TRAF4-215ENST00000584944 RABGAP1Q9Y3P9 1069 aa16.15■□□□□ 0.18
TRAF4-215ENST00000584944 PTPRFP10586 1907 aa16.14■□□□□ 0.17
TRAF4-215ENST00000584944 KLF18A0A0U1RQI7 1052 aa16.14■□□□□ 0.17
TRAF4-215ENST00000584944 SPDYE16A6NNV3 312 aaPredicted RBP16.14■□□□□ 0.17
TRAF4-215ENST00000584944 GOLGA8BA8MQT2 603 aa16.14■□□□□ 0.17
TRAF4-215ENST00000584944 ZBTB43O43298 467 aa16.14■□□□□ 0.17
TRAF4-215ENST00000584944 ECM2O94769 699 aaPredicted RBP16.14■□□□□ 0.17
TRAF4-215ENST00000584944 MYCP01106 439 aaPredicted RBP16.14■□□□□ 0.17
TRAF4-215ENST00000584944 GOLGA8HP0CJ92 632 aa16.14■□□□□ 0.17
TRAF4-215ENST00000584944 BCRP11274 1271 aa16.14■□□□□ 0.17
TRAF4-215ENST00000584944 HOXD10P28358 340 aa16.14■□□□□ 0.17
TRAF4-215ENST00000584944 GNAQP50148 359 aa16.14■□□□□ 0.17
TRAF4-215ENST00000584944 NEK4P51957 841 aa16.14■□□□□ 0.17
TRAF4-215ENST00000584944 ZNF543Q08ER8 600 aa16.14■□□□□ 0.17
TRAF4-215ENST00000584944 FAM110CQ1W6H9 321 aa16.14■□□□□ 0.17
TRAF4-215ENST00000584944 HABP4Q5JVS0 413 aaKnown RBP16.14■□□□□ 0.17
TRAF4-215ENST00000584944 MICU3Q86XE3 530 aa16.14■□□□□ 0.17
TRAF4-215ENST00000584944 ATG4CQ96DT6 458 aa16.14■□□□□ 0.17
TRAF4-215ENST00000584944 FBXO28Q9NVF7 368 aa16.14■□□□□ 0.17
TRAF4-215ENST00000584944 CCDC196A0A1B0GTZ2 297 aa16.13■□□□□ 0.17
TRAF4-215ENST00000584944 KLRF2D3W0D1 207 aa16.13■□□□□ 0.17
TRAF4-215ENST00000584944 FMNL1O95466 1100 aaPredicted RBP16.13■□□□□ 0.17
TRAF4-215ENST00000584944 SLC16A2P36021 539 aa16.13■□□□□ 0.17
TRAF4-215ENST00000584944 FCGRTP55899 365 aa16.13■□□□□ 0.17
TRAF4-215ENST00000584944 SYDE2Q5VT97 1194 aa16.13■□□□□ 0.17
TRAF4-215ENST00000584944 CCDC144CPQ8IYA2 1237 aa16.13■□□□□ 0.17
TRAF4-215ENST00000584944 LZTS2Q9BRK4 669 aa16.13■□□□□ 0.17
TRAF4-215ENST00000584944 MYL10Q9BUA6 226 aa16.13■□□□□ 0.17
TRAF4-215ENST00000584944 GPHNQ9NQX3 736 aaPredicted RBP16.13■□□□□ 0.17
TRAF4-215ENST00000584944 IVNS1ABPQ9Y6Y0 642 aa16.13■□□□□ 0.17
TRAF4-215ENST00000584944 CEP290O15078 2479 aa16.12■□□□□ 0.17
TRAF4-215ENST00000584944 GOLGA8AA7E2F4 631 aa16.12■□□□□ 0.17
TRAF4-215ENST00000584944 VWA5AO00534 786 aa16.12■□□□□ 0.17
TRAF4-215ENST00000584944 ERVK-9P63128 1117 aa16.12■□□□□ 0.17
TRAF4-215ENST00000584944 ERVK-24P63145 666 aa16.12■□□□□ 0.17
TRAF4-215ENST00000584944 GRM4Q14833 912 aa16.12■□□□□ 0.17
TRAF4-215ENST00000584944 MTFR1Q15390 333 aa16.12■□□□□ 0.17
TRAF4-215ENST00000584944 SGMS1Q86VZ5 419 aa16.12■□□□□ 0.17
TRAF4-215ENST00000584944 CPXCR1Q8N123 301 aa16.12■□□□□ 0.17
TRAF4-215ENST00000584944 COA7Q96BR5 231 aa16.12■□□□□ 0.17
TRAF4-215ENST00000584944 SENP2Q9HC62 589 aa16.12■□□□□ 0.17
TRAF4-215ENST00000584944 VAT1LQ9HCJ6 419 aa16.12■□□□□ 0.17
TRAF4-215ENST00000584944 PNMA2Q9UL42 364 aa16.12■□□□□ 0.17
TRAF4-215ENST00000584944 TNPO2O14787 897 aaKnown RBP16.11■□□□□ 0.17
TRAF4-215ENST00000584944 ST18O60284 1047 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 PLA2G6O60733 806 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 SNHG28P0DPA3 235 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 GRK4P32298 578 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 COPB2P35606 906 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 RBM25P49756 843 aaKnown RBP16.11■□□□□ 0.17
TRAF4-215ENST00000584944 METAP2P50579 478 aaKnown RBP eCLIP16.11■□□□□ 0.17
TRAF4-215ENST00000584944 APOBRQ0VD83 1088 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 RTN1Q16799 776 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 TTBK2Q6IQ55 1244 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 CCDC174Q6PII3 467 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 APOA5Q6Q788 366 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 LBX2Q6XYB7 198 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms