RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 PFASO15067 1338 aa20.31■□□□□ 0.84
ITGB4-213ENST00000584939 HSPD1P10809 573 aaKnown RBP20.31■□□□□ 0.84
ITGB4-213ENST00000584939 COL6A1P12109 1028 aa20.31■□□□□ 0.84
ITGB4-213ENST00000584939 BMP3P12645 472 aa20.31■□□□□ 0.84
ITGB4-213ENST00000584939 SDSP20132 328 aa20.31■□□□□ 0.84
ITGB4-213ENST00000584939 SLC4A3P48751 1232 aa20.31■□□□□ 0.84
ITGB4-213ENST00000584939 PRAMEF19Q5SWL8 479 aa20.31■□□□□ 0.84
ITGB4-213ENST00000584939 C7orf61Q8IZ16 206 aa20.31■□□□□ 0.84
ITGB4-213ENST00000584939 CPXCR1Q8N123 301 aa20.31■□□□□ 0.84
ITGB4-213ENST00000584939 IL17RBQ9NRM6 502 aa20.31■□□□□ 0.84
ITGB4-213ENST00000584939 ISY1Q9ULR0 285 aaKnown RBP20.31■□□□□ 0.84
ITGB4-213ENST00000584939 STX8Q9UNK0 236 aa20.31■□□□□ 0.84
ITGB4-213ENST00000584939 RIPK3Q9Y572 518 aa20.31■□□□□ 0.84
ITGB4-213ENST00000584939 PARP14Q460N5 1801 aa20.31■□□□□ 0.84
ITGB4-213ENST00000584939 CCDC171Q6TFL3 1326 aa20.3■□□□□ 0.84
ITGB4-213ENST00000584939 ATP2A1O14983 1001 aa20.3■□□□□ 0.84
ITGB4-213ENST00000584939 ORC4O43929 436 aa20.3■□□□□ 0.84
ITGB4-213ENST00000584939 NMT2O60551 498 aa20.3■□□□□ 0.84
ITGB4-213ENST00000584939 FGRP09769 529 aa20.3■□□□□ 0.84
ITGB4-213ENST00000584939 ZNF792Q3KQV3 632 aa20.3■□□□□ 0.84
ITGB4-213ENST00000584939 CHMP4CQ96CF2 233 aa20.3■□□□□ 0.84
ITGB4-213ENST00000584939 SLC38A10Q9HBR0 1119 aa20.3■□□□□ 0.84
ITGB4-213ENST00000584939 RAVER2Q9HCJ3 691 aaKnown RBP20.3■□□□□ 0.84
ITGB4-213ENST00000584939 TOMM22Q9NS69 142 aa20.3■□□□□ 0.84
ITGB4-213ENST00000584939 RBM27Q9P2N5 1060 aaKnown RBP20.3■□□□□ 0.84
ITGB4-213ENST00000584939 DIS3Q9Y2L1 958 aaKnown RBP20.3■□□□□ 0.84
ITGB4-213ENST00000584939 TMEM232C9JQI7 657 aa20.29■□□□□ 0.84
ITGB4-213ENST00000584939 SEPT4O43236 478 aa20.29■□□□□ 0.84
ITGB4-213ENST00000584939 MCCP23508 829 aa20.29■□□□□ 0.84
ITGB4-213ENST00000584939 SLC1A4P43007 532 aa20.29■□□□□ 0.84
ITGB4-213ENST00000584939 GMCL1Q96IK5 515 aa20.29■□□□□ 0.84
ITGB4-213ENST00000584939 MFAP1P55081 439 aaKnown RBP20.28■□□□□ 0.84
ITGB4-213ENST00000584939 RRP12Q5JTH9 1297 aaKnown RBP20.28■□□□□ 0.84
ITGB4-213ENST00000584939 ANO1Q5XXA6 986 aa20.28■□□□□ 0.84
ITGB4-213ENST00000584939 CHURC1Q8WUH1 139 aa20.28■□□□□ 0.84
ITGB4-213ENST00000584939 ZMYM6O95789 1325 aa20.27■□□□□ 0.84
ITGB4-213ENST00000584939 COL11A1P12107 1806 aaPredicted RBP20.27■□□□□ 0.84
ITGB4-213ENST00000584939 FXR1P51114 621 aaKnown RBP eCLIP20.27■□□□□ 0.84
ITGB4-213ENST00000584939 STAT2P52630 851 aa20.27■□□□□ 0.84
ITGB4-213ENST00000584939 OAZ1P54368 228 aa20.27■□□□□ 0.84
ITGB4-213ENST00000584939 HAND2P61296 217 aa20.27■□□□□ 0.84
ITGB4-213ENST00000584939 IKQ13123 557 aaPredicted RBP20.27■□□□□ 0.84
ITGB4-213ENST00000584939 FAM160B2Q86V87 743 aa20.27■□□□□ 0.84
ITGB4-213ENST00000584939 STAG1Q8WVM7 1258 aa20.27■□□□□ 0.84
ITGB4-213ENST00000584939 DDX11Q96FC9 970 aa20.27■□□□□ 0.84
ITGB4-213ENST00000584939 TINF2Q9BSI4 451 aa20.27■□□□□ 0.84
ITGB4-213ENST00000584939 SENP6Q9GZR1 1112 aaPredicted RBP20.27■□□□□ 0.84
ITGB4-213ENST00000584939 PRO3102Q9H379 93 aa20.27■□□□□ 0.84
ITGB4-213ENST00000584939 DIAPH3Q9NSV4 1193 aa20.27■□□□□ 0.84
ITGB4-213ENST00000584939 ZMYND8Q9ULU4 1186 aaPredicted RBP20.27■□□□□ 0.84
ITGB4-213ENST00000584939 MYH4Q9Y623 1939 aa20.26■□□□□ 0.83
ITGB4-213ENST00000584939 DNM1LO00429 736 aa20.26■□□□□ 0.83
ITGB4-213ENST00000584939 FDX1P10109 184 aa20.26■□□□□ 0.83
ITGB4-213ENST00000584939 NOVP48745 357 aa20.26■□□□□ 0.83
ITGB4-213ENST00000584939 LRRC26Q2I0M4 334 aa20.26■□□□□ 0.83
ITGB4-213ENST00000584939 RCSD1Q6JBY9 416 aa20.26■□□□□ 0.83
ITGB4-213ENST00000584939 CWC27Q6UX04 472 aaKnown RBP20.26■□□□□ 0.83
ITGB4-213ENST00000584939 KCTD1Q719H9 257 aa20.26■□□□□ 0.83
ITGB4-213ENST00000584939 ARRDC4Q8NCT1 418 aa20.26■□□□□ 0.83
ITGB4-213ENST00000584939 NRBP1Q9UHY1 535 aa20.26■□□□□ 0.83
ITGB4-213ENST00000584939 SYN1P17600 705 aa20.25■□□□□ 0.83
ITGB4-213ENST00000584939 GJC2Q5T442 439 aaPredicted RBP20.25■□□□□ 0.83
ITGB4-213ENST00000584939 FBXO40Q9UH90 709 aa20.25■□□□□ 0.83
ITGB4-213ENST00000584939 MTMR7Q9Y216 660 aa20.25■□□□□ 0.83
ITGB4-213ENST00000584939 DNAJC25-GNG10A0A024R161 153 aa20.24■□□□□ 0.83
ITGB4-213ENST00000584939 HIP1O00291 1037 aa20.24■□□□□ 0.83
ITGB4-213ENST00000584939 PLA2G6O60733 806 aa20.24■□□□□ 0.83
ITGB4-213ENST00000584939 TAL1P17542 331 aaPredicted RBP20.24■□□□□ 0.83
ITGB4-213ENST00000584939 AKNAD1Q5T1N1 836 aa20.24■□□□□ 0.83
ITGB4-213ENST00000584939 MFSD6Q6ZSS7 791 aa20.24■□□□□ 0.83
ITGB4-213ENST00000584939 CHST13Q8NET6 341 aa20.24■□□□□ 0.83
ITGB4-213ENST00000584939 TCP11L1Q9NUJ3 509 aa20.24■□□□□ 0.83
ITGB4-213ENST00000584939 KBTBD13C9JR72 458 aa20.23■□□□□ 0.83
ITGB4-213ENST00000584939 MYCNP04198 464 aaPredicted RBP20.23■□□□□ 0.83
ITGB4-213ENST00000584939 TOP1P11387 765 aaKnown RBP20.23■□□□□ 0.83
ITGB4-213ENST00000584939 PCP11498 1178 aaKnown RBP20.23■□□□□ 0.83
ITGB4-213ENST00000584939 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.23■□□□□ 0.83
ITGB4-213ENST00000584939 RASGRP2Q7LDG7 609 aa20.23■□□□□ 0.83
ITGB4-213ENST00000584939 TBC1D10CQ8IV04 446 aa20.23■□□□□ 0.83
ITGB4-213ENST00000584939 ANKRD35Q8N283 1001 aa20.23■□□□□ 0.83
ITGB4-213ENST00000584939 MSL3Q8N5Y2 521 aaKnown RBP20.23■□□□□ 0.83
ITGB4-213ENST00000584939 AGBL1Q96MI9 1066 aa20.23■□□□□ 0.83
ITGB4-213ENST00000584939 TMEM47Q9BQJ4 181 aa20.23■□□□□ 0.83
ITGB4-213ENST00000584939 HOMER2Q9NSB8 354 aa20.23■□□□□ 0.83
ITGB4-213ENST00000584939 CNPY2Q9Y2B0 182 aa20.23■□□□□ 0.83
ITGB4-213ENST00000584939 ALPK3Q96L96 1907 aa20.23■□□□□ 0.83
ITGB4-213ENST00000584939 ZNF213O14771 459 aa20.22■□□□□ 0.83
ITGB4-213ENST00000584939 ZNF865P0CJ78 1059 aaPredicted RBP20.22■□□□□ 0.83
ITGB4-213ENST00000584939 ATN1P54259 1190 aaPredicted RBP20.22■□□□□ 0.83
ITGB4-213ENST00000584939 CCDC96Q2M329 555 aa20.22■□□□□ 0.83
ITGB4-213ENST00000584939 DCAF4Q8WV16 495 aa20.22■□□□□ 0.83
ITGB4-213ENST00000584939 RNF41Q9H4P4 317 aaPredicted RBP20.22■□□□□ 0.83
ITGB4-213ENST00000584939 PRR12Q9ULL5 1215 aa20.22■□□□□ 0.83
ITGB4-213ENST00000584939 ZNF536O15090 1300 aa20.22■□□□□ 0.83
ITGB4-213ENST00000584939 CEP290O15078 2479 aa20.21■□□□□ 0.83
ITGB4-213ENST00000584939 SNAI1O95863 264 aaPredicted RBP20.21■□□□□ 0.83
ITGB4-213ENST00000584939 RARBP10826 455 aa20.21■□□□□ 0.83
ITGB4-213ENST00000584939 GSPT1P15170 499 aaKnown RBP20.21■□□□□ 0.83
ITGB4-213ENST00000584939 SNAP25P60880 206 aa20.21■□□□□ 0.83
ITGB4-213ENST00000584939 LRRC41Q15345 812 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms