RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.1■□□□□ 0.17
UBBP4-202ENST00000584755 PAPPA2Q9BXP8 1791 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 ESYT2A0FGR8 921 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 IQCA1LA6NCM1 817 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 POTECB2RU33 542 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 M0R2N6 131 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 PLA2G6O60733 806 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 INPP5BP32019 993 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 NLRP5P59047 1200 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 RILPL1Q5EBL4 403 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 NOL9Q5SY16 702 aaKnown RBP16.09■□□□□ 0.17
UBBP4-202ENST00000584755 PRAMEF18Q5VWM3 479 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 PPP1R18Q6NYC8 613 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 HEATR3Q7Z4Q2 680 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 SCYL3Q8IZE3 742 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 LINC00301Q8NCQ3 95 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 CCDC12Q8WUD4 166 aaPredicted RBP16.09■□□□□ 0.17
UBBP4-202ENST00000584755 KLRG1Q96E93 195 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 VAT1LQ9HCJ6 419 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 PCDHA4Q9UN74 947 aa16.09■□□□□ 0.17
UBBP4-202ENST00000584755 ZBTB5O15062 677 aa16.08■□□□□ 0.16
UBBP4-202ENST00000584755 SLC16A2P36021 539 aa16.08■□□□□ 0.16
UBBP4-202ENST00000584755 TOB1P50616 345 aaPredicted RBP16.08■□□□□ 0.16
UBBP4-202ENST00000584755 ANO1Q5XXA6 986 aa16.08■□□□□ 0.16
UBBP4-202ENST00000584755 HOMER1Q86YM7 354 aa16.08■□□□□ 0.16
UBBP4-202ENST00000584755 SULF1Q8IWU6 871 aa16.08■□□□□ 0.16
UBBP4-202ENST00000584755 BLIDQ8IZY5 108 aa16.08■□□□□ 0.16
UBBP4-202ENST00000584755 NUP88Q99567 741 aaPredicted RBP16.08■□□□□ 0.16
UBBP4-202ENST00000584755 WDR18Q9BV38 432 aa16.08■□□□□ 0.16
UBBP4-202ENST00000584755 GLIS2Q9BZE0 524 aaPredicted RBP16.08■□□□□ 0.16
UBBP4-202ENST00000584755 KIAA1683Q9H0B3 1180 aa16.08■□□□□ 0.16
UBBP4-202ENST00000584755 TAF1DQ9H5J8 278 aaPredicted RBP16.08■□□□□ 0.16
UBBP4-202ENST00000584755 CLIC4Q9Y696 253 aa16.08■□□□□ 0.16
UBBP4-202ENST00000584755 USP17L10C9JJH3 530 aa16.07■□□□□ 0.16
UBBP4-202ENST00000584755 KCNG4Q8TDN1 519 aa16.07■□□□□ 0.16
UBBP4-202ENST00000584755 PGBD1Q96JS3 809 aa16.07■□□□□ 0.16
UBBP4-202ENST00000584755 WRNIP1Q96S55 665 aa16.07■□□□□ 0.16
UBBP4-202ENST00000584755 MORC2Q9Y6X9 1032 aaPredicted RBP16.07■□□□□ 0.16
UBBP4-202ENST00000584755 TMEM232C9JQI7 657 aa16.06■□□□□ 0.16
UBBP4-202ENST00000584755 ADM5C9JUS6 153 aa16.06■□□□□ 0.16
UBBP4-202ENST00000584755 RAD21O60216 631 aa16.06■□□□□ 0.16
UBBP4-202ENST00000584755 PPP1R11O60927 126 aaPredicted RBP16.06■□□□□ 0.16
UBBP4-202ENST00000584755 USP2O75604 605 aaPredicted RBP16.06■□□□□ 0.16
UBBP4-202ENST00000584755 NAPAP54920 295 aa16.06■□□□□ 0.16
UBBP4-202ENST00000584755 CEBPZQ03701 1054 aaKnown RBP16.06■□□□□ 0.16
UBBP4-202ENST00000584755 SLC39A14Q15043 492 aa16.06■□□□□ 0.16
UBBP4-202ENST00000584755 PTPAQ15257 358 aa16.06■□□□□ 0.16
UBBP4-202ENST00000584755 EARS2Q5JPH6 523 aaKnown RBP16.06■□□□□ 0.16
UBBP4-202ENST00000584755 SYDE2Q5VT97 1194 aa16.06■□□□□ 0.16
UBBP4-202ENST00000584755 CCDC84Q86UT8 332 aaPredicted RBP16.06■□□□□ 0.16
UBBP4-202ENST00000584755 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.06■□□□□ 0.16
UBBP4-202ENST00000584755 LPAR1Q92633 364 aa16.06■□□□□ 0.16
UBBP4-202ENST00000584755 PHIPQ8WWQ0 1821 aa16.06■□□□□ 0.16
UBBP4-202ENST00000584755 ADAMTS3O15072 1205 aa16.05■□□□□ 0.16
UBBP4-202ENST00000584755 GNA11P29992 359 aa16.05■□□□□ 0.16
UBBP4-202ENST00000584755 TRAPPC10P48553 1259 aa16.05■□□□□ 0.16
UBBP4-202ENST00000584755 SF3A1Q15459 793 aaKnown RBP16.05■□□□□ 0.16
UBBP4-202ENST00000584755 KRT26Q7Z3Y9 468 aa16.05■□□□□ 0.16
UBBP4-202ENST00000584755 PNMA8AQ86V59 439 aaPredicted RBP16.05■□□□□ 0.16
UBBP4-202ENST00000584755 SPICE1Q8N0Z3 855 aa16.05■□□□□ 0.16
UBBP4-202ENST00000584755 C6orf50Q9HD87 102 aa16.05■□□□□ 0.16
UBBP4-202ENST00000584755 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.05■□□□□ 0.16
UBBP4-202ENST00000584755 SMCO2A6NFE2 343 aa16.04■□□□□ 0.16
UBBP4-202ENST00000584755 SPTLC2O15270 562 aa16.04■□□□□ 0.16
UBBP4-202ENST00000584755 PPP6R2O75170 966 aa16.04■□□□□ 0.16
UBBP4-202ENST00000584755 PTPRAP18433 802 aa16.04■□□□□ 0.16
UBBP4-202ENST00000584755 STAT2P52630 851 aa16.04■□□□□ 0.16
UBBP4-202ENST00000584755 STK38Q15208 465 aa16.04■□□□□ 0.16
UBBP4-202ENST00000584755 QRICH1Q2TAL8 776 aa16.04■□□□□ 0.16
UBBP4-202ENST00000584755 FAM83BQ5T0W9 1011 aa16.04■□□□□ 0.16
UBBP4-202ENST00000584755 ZKSCAN4Q969J2 545 aaPredicted RBP16.04■□□□□ 0.16
UBBP4-202ENST00000584755 AS3MTQ9HBK9 375 aa16.04■□□□□ 0.16
UBBP4-202ENST00000584755 PICK1Q9NRD5 415 aa16.04■□□□□ 0.16
UBBP4-202ENST00000584755 PRR12Q9ULL5 1215 aa16.04■□□□□ 0.16
UBBP4-202ENST00000584755 PCDHA6Q9UN73 950 aa16.04■□□□□ 0.16
UBBP4-202ENST00000584755 PCDHA8Q9Y5H6 950 aa16.04■□□□□ 0.16
UBBP4-202ENST00000584755 FAM205CA6NFA0 338 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 WDR46O15213 610 aaKnown RBP16.03■□□□□ 0.16
UBBP4-202ENST00000584755 USP14P54578 494 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 CDC37Q16543 378 aaPredicted RBP16.03■□□□□ 0.16
UBBP4-202ENST00000584755 NOM1Q5C9Z4 860 aaKnown RBP16.03■□□□□ 0.16
UBBP4-202ENST00000584755 FAM160B2Q86V87 743 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 BICD2Q8TD16 824 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 CHURC1Q8WUH1 139 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 COA7Q96BR5 231 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 FEZ1Q99689 392 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 FEM1BQ9UK73 627 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 FZD1Q9UP38 647 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 MAP3K9P80192 1104 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 ADALQ6DHV7 355 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 DLK2Q6UY11 383 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 ZNF280CQ8ND82 737 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 CDCA5Q96FF9 252 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 C12orf42Q96LP6 360 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 RIC8AQ9NPQ8 531 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 ISY1Q9ULR0 285 aaKnown RBP16.03■□□□□ 0.16
UBBP4-202ENST00000584755 NOL7Q9UMY1 257 aaKnown RBP16.03■□□□□ 0.16
UBBP4-202ENST00000584755 PCDHA7Q9UN72 937 aa16.03■□□□□ 0.16
UBBP4-202ENST00000584755 OTOFQ9HC10 1997 aa16.02■□□□□ 0.16
UBBP4-202ENST00000584755 A0A1W2PQ27 194 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms