RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 KRT23Q9C075 422 aa29.27■■■□□ 2.28
TTC39C-209ENST00000584250 RAVER2Q9HCJ3 691 aaKnown RBP29.27■■■□□ 2.28
TTC39C-209ENST00000584250 FRMPD2Q68DX3 1309 aaPredicted RBP29.26■■■□□ 2.27
TTC39C-209ENST00000584250 COL9A3Q14050 684 aaPredicted RBP29.26■■■□□ 2.27
TTC39C-209ENST00000584250 CCDC96Q2M329 555 aa29.26■■■□□ 2.27
TTC39C-209ENST00000584250 ENAHQ8N8S7 591 aaPredicted RBP29.26■■■□□ 2.27
TTC39C-209ENST00000584250 ZSCAN10Q96SZ4 725 aaPredicted RBP29.26■■■□□ 2.27
TTC39C-209ENST00000584250 TMEM106CQ9BVX2 250 aa29.26■■■□□ 2.27
TTC39C-209ENST00000584250 SLC38A10Q9HBR0 1119 aa29.26■■■□□ 2.27
TTC39C-209ENST00000584250 FLRT1Q9NZU1 646 aa29.26■■■□□ 2.27
TTC39C-209ENST00000584250 IVNS1ABPQ9Y6Y0 642 aa29.26■■■□□ 2.27
TTC39C-209ENST00000584250 E7EWF7 191 aa29.25■■■□□ 2.27
TTC39C-209ENST00000584250 CDC45O75419 566 aa29.25■■■□□ 2.27
TTC39C-209ENST00000584250 XRCC5P13010 732 aaKnown RBP29.25■■■□□ 2.27
TTC39C-209ENST00000584250 SLC16A2P36021 539 aa29.25■■■□□ 2.27
TTC39C-209ENST00000584250 RGS2P41220 211 aa29.25■■■□□ 2.27
TTC39C-209ENST00000584250 STAT2P52630 851 aa29.25■■■□□ 2.27
TTC39C-209ENST00000584250 KIAA1211Q6ZU35 1233 aa29.25■■■□□ 2.27
TTC39C-209ENST00000584250 CNNM2Q9H8M5 875 aa29.25■■■□□ 2.27
TTC39C-209ENST00000584250 GPCPD1Q9NPB8 672 aa29.25■■■□□ 2.27
TTC39C-209ENST00000584250 ANO2Q9NQ90 1003 aa29.25■■■□□ 2.27
TTC39C-209ENST00000584250 COBLO75128 1261 aa29.24■■■□□ 2.27
TTC39C-209ENST00000584250 HMGCRP04035 888 aa29.24■■■□□ 2.27
TTC39C-209ENST00000584250 PDHBP11177 359 aa29.24■■■□□ 2.27
TTC39C-209ENST00000584250 ADORA2AP29274 412 aa29.24■■■□□ 2.27
TTC39C-209ENST00000584250 SLC4A3P48751 1232 aa29.24■■■□□ 2.27
TTC39C-209ENST00000584250 UBXN2AP68543 259 aa29.24■■■□□ 2.27
TTC39C-209ENST00000584250 IKQ13123 557 aaPredicted RBP29.24■■■□□ 2.27
TTC39C-209ENST00000584250 SNRNP48Q6IEG0 339 aaKnown RBP29.24■■■□□ 2.27
TTC39C-209ENST00000584250 IQCA1Q86XH1 822 aa29.24■■■□□ 2.27
TTC39C-209ENST00000584250 DGKHQ86XP1 1220 aa29.24■■■□□ 2.27
TTC39C-209ENST00000584250 DCAF4Q8WV16 495 aa29.24■■■□□ 2.27
TTC39C-209ENST00000584250 APBA2Q99767 749 aa29.24■■■□□ 2.27
TTC39C-209ENST00000584250 RNF208Q9H0X6 261 aa29.24■■■□□ 2.27
TTC39C-209ENST00000584250 MROH8Q9H579 483 aa29.24■■■□□ 2.27
TTC39C-209ENST00000584250 ZNFX1Q9P2E3 1918 aaKnown RBP29.24■■■□□ 2.27
TTC39C-209ENST00000584250 TNKSO95271 1327 aa29.23■■■□□ 2.27
TTC39C-209ENST00000584250 ZBED4O75132 1171 aa29.23■■■□□ 2.27
TTC39C-209ENST00000584250 ANKS1AQ92625 1134 aa29.23■■■□□ 2.27
TTC39C-209ENST00000584250 PRR12Q9ULL5 1215 aa29.23■■■□□ 2.27
TTC39C-209ENST00000584250 ZNF236Q9UL36 1845 aa29.22■■■□□ 2.27
TTC39C-209ENST00000584250 SLC25A27O95847 323 aa29.22■■■□□ 2.27
TTC39C-209ENST00000584250 TAL1P17542 331 aaPredicted RBP29.22■■■□□ 2.27
TTC39C-209ENST00000584250 CHST3Q7LGC8 479 aa29.22■■■□□ 2.27
TTC39C-209ENST00000584250 FAM160B2Q86V87 743 aa29.22■■■□□ 2.27
TTC39C-209ENST00000584250 CHURC1Q8WUH1 139 aa29.22■■■□□ 2.27
TTC39C-209ENST00000584250 SHISA4Q96DD7 197 aa29.22■■■□□ 2.27
TTC39C-209ENST00000584250 TEX13BQ9BXU2 312 aa29.22■■■□□ 2.27
TTC39C-209ENST00000584250 ZNF536O15090 1300 aa29.21■■■□□ 2.27
TTC39C-209ENST00000584250 SLC27A2O14975 620 aa29.21■■■□□ 2.27
TTC39C-209ENST00000584250 PLA2G6O60733 806 aa29.21■■■□□ 2.27
TTC39C-209ENST00000584250 HOXC6P09630 235 aa29.21■■■□□ 2.27
TTC39C-209ENST00000584250 SNHG28P0DPA3 235 aa29.21■■■□□ 2.27
TTC39C-209ENST00000584250 ZKSCAN1P17029 563 aaPredicted RBP29.21■■■□□ 2.27
TTC39C-209ENST00000584250 SEC23AQ15436 765 aa29.21■■■□□ 2.27
TTC39C-209ENST00000584250 SENP2Q9HC62 589 aa29.21■■■□□ 2.27
TTC39C-209ENST00000584250 SMCHD1A6NHR9 2005 aa29.21■■■□□ 2.27
TTC39C-209ENST00000584250 ATP2A1O14983 1001 aa29.2■■■□□ 2.26
TTC39C-209ENST00000584250 STRNO43815 780 aa29.2■■■□□ 2.26
TTC39C-209ENST00000584250 GOLGA8HP0CJ92 632 aa29.2■■■□□ 2.26
TTC39C-209ENST00000584250 ZNF543Q08ER8 600 aa29.2■■■□□ 2.26
TTC39C-209ENST00000584250 NECTIN1Q15223 517 aa29.2■■■□□ 2.26
TTC39C-209ENST00000584250 PNMA1Q8ND90 353 aa29.2■■■□□ 2.26
TTC39C-209ENST00000584250 AGBL1Q96MI9 1066 aa29.2■■■□□ 2.26
TTC39C-209ENST00000584250 CPVLQ9H3G5 476 aa29.2■■■□□ 2.26
TTC39C-209ENST00000584250 PGK2P07205 417 aa29.19■■■□□ 2.26
TTC39C-209ENST00000584250 NT5C2P49902 561 aa29.19■■■□□ 2.26
TTC39C-209ENST00000584250 ANTXR2P58335 489 aa29.19■■■□□ 2.26
TTC39C-209ENST00000584250 MLLT1Q03111 559 aaPredicted RBP29.19■■■□□ 2.26
TTC39C-209ENST00000584250 CACNB2Q08289 660 aaPredicted RBP29.19■■■□□ 2.26
TTC39C-209ENST00000584250 MAP3K21Q5TCX8 1036 aa29.19■■■□□ 2.26
TTC39C-209ENST00000584250 CREB3L3Q68CJ9 461 aa29.19■■■□□ 2.26
TTC39C-209ENST00000584250 CCDC174Q6PII3 467 aa29.19■■■□□ 2.26
TTC39C-209ENST00000584250 BTNL9Q6UXG8 535 aa29.19■■■□□ 2.26
TTC39C-209ENST00000584250 UBAC1Q9BSL1 405 aa29.19■■■□□ 2.26
TTC39C-209ENST00000584250 CTDP1Q9Y5B0 961 aaPredicted RBP29.19■■■□□ 2.26
TTC39C-209ENST00000584250 GJB1P08034 283 aa29.18■■■□□ 2.26
TTC39C-209ENST00000584250 FCER1AP12319 257 aa29.18■■■□□ 2.26
TTC39C-209ENST00000584250 PRKAR2AP13861 404 aaKnown RBP29.18■■■□□ 2.26
TTC39C-209ENST00000584250 TRDNQ13061 729 aa29.18■■■□□ 2.26
TTC39C-209ENST00000584250 DPP9Q86TI2 863 aa29.18■■■□□ 2.26
TTC39C-209ENST00000584250 MB21D2Q8IYB1 491 aaPredicted RBP29.18■■■□□ 2.26
TTC39C-209ENST00000584250 MMP19Q99542 508 aa29.18■■■□□ 2.26
TTC39C-209ENST00000584250 KAT14Q9H8E8 782 aa29.18■■■□□ 2.26
TTC39C-209ENST00000584250 IGHA2P01877 340 aa29.17■■■□□ 2.26
TTC39C-209ENST00000584250 CCDC178Q5BJE1 867 aa29.17■■■□□ 2.26
TTC39C-209ENST00000584250 SYDE2Q5VT97 1194 aa29.17■■■□□ 2.26
TTC39C-209ENST00000584250 NCOA7Q8NI08 942 aa29.17■■■□□ 2.26
TTC39C-209ENST00000584250 DEFB118Q96PH6 123 aa29.17■■■□□ 2.26
TTC39C-209ENST00000584250 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.17■■■□□ 2.26
TTC39C-209ENST00000584250 PAK6Q9NQU5 681 aaPredicted RBP29.17■■■□□ 2.26
TTC39C-209ENST00000584250 HOMER2Q9NSB8 354 aa29.17■■■□□ 2.26
TTC39C-209ENST00000584250 CYP2C19P33261 490 aa29.16■■■□□ 2.26
TTC39C-209ENST00000584250 RALYLQ86SE5 291 aaKnown RBP29.16■■■□□ 2.26
TTC39C-209ENST00000584250 ABRAQ8N0Z2 381 aa29.16■■■□□ 2.26
TTC39C-209ENST00000584250 U2AF1L4Q8WU68 220 aaKnown RBP29.16■■■□□ 2.26
TTC39C-209ENST00000584250 GPHNQ9NQX3 736 aaPredicted RBP29.16■■■□□ 2.26
TTC39C-209ENST00000584250 CCND3P30281 292 aaPredicted RBP29.15■■■□□ 2.26
TTC39C-209ENST00000584250 GJA8P48165 433 aa29.15■■■□□ 2.26
TTC39C-209ENST00000584250 OAZ1P54368 228 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms