RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 RAPGEF3O95398 923 aa8.14□□□□□ -1.11
TTC39C-208ENST00000584095 SUMO1P63165 101 aaKnown RBP8.14□□□□□ -1.11
TTC39C-208ENST00000584095 SF1Q15637 639 aaKnown RBP8.14□□□□□ -1.11
TTC39C-208ENST00000584095 GTF2IRD2BQ6EKJ0 949 aa8.14□□□□□ -1.11
TTC39C-208ENST00000584095 OGFOD3Q6PK18 319 aa8.14□□□□□ -1.11
TTC39C-208ENST00000584095 C22orf34Q6ZV56 151 aa8.14□□□□□ -1.11
TTC39C-208ENST00000584095 GTF2IRD2Q86UP8 949 aa8.14□□□□□ -1.11
TTC39C-208ENST00000584095 NIM1KQ8IY84 436 aa8.14□□□□□ -1.11
TTC39C-208ENST00000584095 DCAF5Q96JK2 942 aa8.14□□□□□ -1.11
TTC39C-208ENST00000584095 TBC1D32Q96NH3 1257 aa8.14□□□□□ -1.11
TTC39C-208ENST00000584095 CLUHP3Q96NS8 147 aa8.14□□□□□ -1.11
TTC39C-208ENST00000584095 IPO9Q96P70 1041 aaKnown RBP8.14□□□□□ -1.11
TTC39C-208ENST00000584095 MINPP1Q9UNW1 487 aa8.14□□□□□ -1.11
TTC39C-208ENST00000584095 DIS3Q9Y2L1 958 aaKnown RBP8.14□□□□□ -1.11
TTC39C-208ENST00000584095 NOP58Q9Y2X3 529 aaKnown RBP8.14□□□□□ -1.11
TTC39C-208ENST00000584095 IRS4O14654 1257 aaPredicted RBP8.13□□□□□ -1.11
TTC39C-208ENST00000584095 PRAMEF1O95521 474 aa8.13□□□□□ -1.11
TTC39C-208ENST00000584095 IBSPP21815 317 aaPredicted RBP8.13□□□□□ -1.11
TTC39C-208ENST00000584095 KIR3DL1P43629 444 aa8.13□□□□□ -1.11
TTC39C-208ENST00000584095 TM4SF20Q53R12 229 aa8.13□□□□□ -1.11
TTC39C-208ENST00000584095 DHX37Q8IY37 1157 aaKnown RBP8.13□□□□□ -1.11
TTC39C-208ENST00000584095 MFSD3Q96ES6 412 aa8.13□□□□□ -1.11
TTC39C-208ENST00000584095 ZDHHC15Q96MV8 337 aa8.13□□□□□ -1.11
TTC39C-208ENST00000584095 RAXQ9Y2V3 346 aa8.13□□□□□ -1.11
TTC39C-208ENST00000584095 SHISA3A0PJX4 238 aa8.12□□□□□ -1.11
TTC39C-208ENST00000584095 H0Y8X5 98 aa8.12□□□□□ -1.11
TTC39C-208ENST00000584095 DLX3O60479 287 aa8.12□□□□□ -1.11
TTC39C-208ENST00000584095 VIL1P09327 827 aaKnown RBP8.12□□□□□ -1.11
TTC39C-208ENST00000584095 ZNF865P0CJ78 1059 aaPredicted RBP8.12□□□□□ -1.11
TTC39C-208ENST00000584095 IGBP1P78318 339 aa8.12□□□□□ -1.11
TTC39C-208ENST00000584095 AMPD3Q01432 767 aa8.12□□□□□ -1.11
TTC39C-208ENST00000584095 NMIQ13287 307 aaPredicted RBP8.12□□□□□ -1.11
TTC39C-208ENST00000584095 GRB10Q13322 594 aa8.12□□□□□ -1.11
TTC39C-208ENST00000584095 FNDC3BQ53EP0 1204 aaKnown RBP8.12□□□□□ -1.11
TTC39C-208ENST00000584095 DSCC1Q9BVC3 393 aa8.12□□□□□ -1.11
TTC39C-208ENST00000584095 MRPL4Q9BYD3 311 aaKnown RBP8.12□□□□□ -1.11
TTC39C-208ENST00000584095 CHST7Q9NS84 486 aa8.12□□□□□ -1.11
TTC39C-208ENST00000584095 GTF2IRD1Q9UHL9 959 aa8.12□□□□□ -1.11
TTC39C-208ENST00000584095 KCNH3Q9ULD8 1083 aa8.12□□□□□ -1.11
TTC39C-208ENST00000584095 CAPN6Q9Y6Q1 641 aa8.12□□□□□ -1.11
TTC39C-208ENST00000584095 DNAJC25-GNG10A0A024R161 153 aa8.11□□□□□ -1.11
TTC39C-208ENST00000584095 FAM170BA6NMN3 283 aa8.11□□□□□ -1.11
TTC39C-208ENST00000584095 IGF2BP3O00425 579 aaKnown RBP eCLIP8.11□□□□□ -1.11
TTC39C-208ENST00000584095 MEIS1O00470 390 aa8.11□□□□□ -1.11
TTC39C-208ENST00000584095 VAMP4O75379 141 aa8.11□□□□□ -1.11
TTC39C-208ENST00000584095 C6orf222P0C671 652 aaPredicted RBP8.11□□□□□ -1.11
TTC39C-208ENST00000584095 GFRA1P56159 465 aa8.11□□□□□ -1.11
TTC39C-208ENST00000584095 TNK2Q07912 1038 aa8.11□□□□□ -1.11
TTC39C-208ENST00000584095 CYP4F3Q08477 520 aa8.11□□□□□ -1.11
TTC39C-208ENST00000584095 ZNF765Q7L2R6 523 aa8.11□□□□□ -1.11
TTC39C-208ENST00000584095 TP53INP1Q96A56 240 aa8.11□□□□□ -1.11
TTC39C-208ENST00000584095 NKX2-4Q9H2Z4 354 aa8.11□□□□□ -1.11
TTC39C-208ENST00000584095 STOML1Q9UBI4 398 aa8.11□□□□□ -1.11
TTC39C-208ENST00000584095 GPR55Q9Y2T6 319 aaPredicted RBP8.11□□□□□ -1.11
TTC39C-208ENST00000584095 SF3B6Q9Y3B4 125 aaKnown RBP8.11□□□□□ -1.11
TTC39C-208ENST00000584095 U3KQE9 123 aa8.11□□□□□ -1.11
TTC39C-208ENST00000584095 CTSKP43235 329 aa8.1□□□□□ -1.11
TTC39C-208ENST00000584095 THNSL2Q86YJ6 484 aa8.1□□□□□ -1.11
TTC39C-208ENST00000584095 MFSD4AQ8N468 514 aa8.1□□□□□ -1.11
TTC39C-208ENST00000584095 FBXL6Q8N531 539 aa8.1□□□□□ -1.11
TTC39C-208ENST00000584095 MFSD14AQ96MC6 490 aa8.1□□□□□ -1.11
TTC39C-208ENST00000584095 HDAC8Q9BY41 377 aa8.1□□□□□ -1.11
TTC39C-208ENST00000584095 A0A087X0B3 334 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 BLACEA4D250 179 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 RNF225M0QZC1 329 aaPredicted RBP8.09□□□□□ -1.11
TTC39C-208ENST00000584095 SNRPB2P08579 225 aaKnown RBP8.09□□□□□ -1.11
TTC39C-208ENST00000584095 MYCLP1P12525 358 aaPredicted RBP8.09□□□□□ -1.11
TTC39C-208ENST00000584095 CDK11BP21127 795 aaKnown RBP8.09□□□□□ -1.11
TTC39C-208ENST00000584095 HOXC12P31275 282 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 ANAPC15P60006 121 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 AMPD2Q01433 879 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 MAP4K2Q12851 820 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 NTRK3Q16288 839 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 CYP27C1Q4G0S4 372 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 TRIM61Q5EBN2 209 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 CRTC3Q6UUV7 619 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 PRR23CQ6ZRP0 262 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 KRT26Q7Z3Y9 468 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 TMEM145Q8NBT3 493 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 PIWIL2Q8TC59 973 aaKnown RBP8.09□□□□□ -1.11
TTC39C-208ENST00000584095 KCTD13Q8WZ19 329 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 C1orf159Q96HA4 380 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 MCMBPQ9BTE3 642 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 SFMBT1Q9UHJ3 866 aa8.09□□□□□ -1.11
TTC39C-208ENST00000584095 F13BP05160 661 aa8.08□□□□□ -1.12
TTC39C-208ENST00000584095 SCG5P05408 212 aa8.08□□□□□ -1.12
TTC39C-208ENST00000584095 SDSP20132 328 aa8.08□□□□□ -1.12
TTC39C-208ENST00000584095 GATA4P43694 442 aa8.08□□□□□ -1.12
TTC39C-208ENST00000584095 KCNJ6P48051 423 aa8.08□□□□□ -1.12
TTC39C-208ENST00000584095 PRSS53Q2L4Q9 553 aa8.08□□□□□ -1.12
TTC39C-208ENST00000584095 DPY19L1Q2PZI1 675 aa8.08□□□□□ -1.12
TTC39C-208ENST00000584095 RPUSD2Q8IZ73 545 aaKnown RBP8.08□□□□□ -1.12
TTC39C-208ENST00000584095 SLC7A14Q8TBB6 771 aa8.08□□□□□ -1.12
TTC39C-208ENST00000584095 GPR62Q9BZJ7 368 aa8.08□□□□□ -1.12
TTC39C-208ENST00000584095 ASCC2Q9H1I8 757 aaPredicted RBP8.08□□□□□ -1.12
TTC39C-208ENST00000584095 TRIM39Q9HCM9 518 aa8.08□□□□□ -1.12
TTC39C-208ENST00000584095 CYP26B1Q9NR63 512 aa8.08□□□□□ -1.12
TTC39C-208ENST00000584095 FAM181BA6NEQ2 426 aa8.07□□□□□ -1.12
TTC39C-208ENST00000584095 GNAT3A8MTJ3 354 aa8.07□□□□□ -1.12
TTC39C-208ENST00000584095 KCNQ2O43526 872 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms