RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 GRIN2CQ14957 1233 aa10.55□□□□□ -0.72
NUP85-223ENST00000583877 ZNF792Q3KQV3 632 aa10.55□□□□□ -0.72
NUP85-223ENST00000583877 TJAP1Q5JTD0 557 aa10.55□□□□□ -0.72
NUP85-223ENST00000583877 ANKRD33Q7Z3H0 272 aa10.55□□□□□ -0.72
NUP85-223ENST00000583877 AACSQ86V21 672 aa10.55□□□□□ -0.72
NUP85-223ENST00000583877 RIOX2Q8IUF8 465 aa10.55□□□□□ -0.72
NUP85-223ENST00000583877 SLC44A5Q8NCS7 719 aa10.55□□□□□ -0.72
NUP85-223ENST00000583877 KCNV2Q8TDN2 545 aa10.55□□□□□ -0.72
NUP85-223ENST00000583877 SDR42E1Q8WUS8 393 aa10.55□□□□□ -0.72
NUP85-223ENST00000583877 TSEN34Q9BSV6 310 aaKnown RBP10.55□□□□□ -0.72
NUP85-223ENST00000583877 TMEM39AQ9NV64 488 aa10.55□□□□□ -0.72
NUP85-223ENST00000583877 ZNF532Q9HCE3 1301 aa10.55□□□□□ -0.72
NUP85-223ENST00000583877 TCRBV5S4A2TA0A5A2 114 aa10.54□□□□□ -0.72
NUP85-223ENST00000583877 ADAMTS4O75173 837 aa10.54□□□□□ -0.72
NUP85-223ENST00000583877 PGK2P07205 417 aa10.54□□□□□ -0.72
NUP85-223ENST00000583877 ZNF865P0CJ78 1059 aaPredicted RBP10.54□□□□□ -0.72
NUP85-223ENST00000583877 CYP2D6P10635 497 aa10.54□□□□□ -0.72
NUP85-223ENST00000583877 AKR1B1P15121 316 aa10.54□□□□□ -0.72
NUP85-223ENST00000583877 TAL1P17542 331 aaPredicted RBP10.54□□□□□ -0.72
NUP85-223ENST00000583877 COPB2P35606 906 aa10.54□□□□□ -0.72
NUP85-223ENST00000583877 FAAP100Q0VG06 881 aa10.54□□□□□ -0.72
NUP85-223ENST00000583877 KCTD2Q14681 263 aa10.54□□□□□ -0.72
NUP85-223ENST00000583877 CEP85Q6P2H3 762 aa10.54□□□□□ -0.72
NUP85-223ENST00000583877 CLEC10AQ8IUN9 316 aa10.54□□□□□ -0.72
NUP85-223ENST00000583877 FTSJ3Q8IY81 847 aaKnown RBP10.54□□□□□ -0.72
NUP85-223ENST00000583877 LCORLQ8N3X6 602 aa10.54□□□□□ -0.72
NUP85-223ENST00000583877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.54□□□□□ -0.72
NUP85-223ENST00000583877 NUP133Q8WUM0 1156 aa10.54□□□□□ -0.72
NUP85-223ENST00000583877 CCDC17Q96LX7 622 aa10.54□□□□□ -0.72
NUP85-223ENST00000583877 ATP8A2Q9NTI2 1148 aa10.54□□□□□ -0.72
NUP85-223ENST00000583877 EXOC6BQ9Y2D4 811 aa10.54□□□□□ -0.72
NUP85-223ENST00000583877 MOXD2PA6NHM9 499 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 DCDC2CA8MYV0 355 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 TNFRSF10AO00220 468 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 VWA5AO00534 786 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 TIMP1P01033 207 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 STAT3P40763 770 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 ACLYP53396 1101 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 ITPRIPQ8IWB1 547 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 MSL3Q8N5Y2 521 aaKnown RBP10.53□□□□□ -0.72
NUP85-223ENST00000583877 USP38Q8NB14 1042 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 TIFAQ96CG3 184 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 DYNLL2Q96FJ2 89 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 ZNF576Q9H609 170 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 STARD7Q9NQZ5 370 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 FBXO28Q9NVF7 368 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 ZNF214Q9UL59 606 aaPredicted RBP10.53□□□□□ -0.72
NUP85-223ENST00000583877 PPP1R9AQ9ULJ8 1098 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 CNPY2Q9Y2B0 182 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 MROH7Q68CQ1 1323 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 SYNGAP1Q96PV0 1343 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 SYNRGQ9UMZ2 1314 aa10.53□□□□□ -0.72
NUP85-223ENST00000583877 GOLIM4O00461 696 aa10.52□□□□□ -0.73
NUP85-223ENST00000583877 EEF2P13639 858 aaKnown RBP10.52□□□□□ -0.73
NUP85-223ENST00000583877 CDK8P49336 464 aa10.52□□□□□ -0.73
NUP85-223ENST00000583877 HSP90AB4PQ58FF6 505 aa10.52□□□□□ -0.73
NUP85-223ENST00000583877 MFSD5Q6N075 450 aa10.52□□□□□ -0.73
NUP85-223ENST00000583877 C16orf86Q6ZW13 317 aa10.52□□□□□ -0.73
NUP85-223ENST00000583877 AMOTL1Q8IY63 956 aa10.52□□□□□ -0.73
NUP85-223ENST00000583877 KLHDC9Q8NEP7 349 aa10.52□□□□□ -0.73
NUP85-223ENST00000583877 REPS2Q8NFH8 660 aa10.52□□□□□ -0.73
NUP85-223ENST00000583877 RHPN1Q8TCX5 695 aa10.52□□□□□ -0.73
NUP85-223ENST00000583877 LENG1Q96BZ8 264 aaPredicted RBP10.52□□□□□ -0.73
NUP85-223ENST00000583877 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.52□□□□□ -0.73
NUP85-223ENST00000583877 ARMT1Q9H993 441 aa10.52□□□□□ -0.73
NUP85-223ENST00000583877 KANSL2Q9H9L4 492 aa10.52□□□□□ -0.73
NUP85-223ENST00000583877 GOPCQ9HD26 462 aa10.52□□□□□ -0.73
NUP85-223ENST00000583877 TBX21Q9UL17 535 aa10.52□□□□□ -0.73
NUP85-223ENST00000583877 LRRC37A2A6NM11 1700 aa10.52□□□□□ -0.73
NUP85-223ENST00000583877 TRIP12Q14669 1992 aaPredicted RBP10.52□□□□□ -0.73
NUP85-223ENST00000583877 PRRC2BQ5JSZ5 2229 aaKnown RBP10.52□□□□□ -0.73
NUP85-223ENST00000583877 SCN5AQ14524 2016 aa10.51□□□□□ -0.73
NUP85-223ENST00000583877 LCTP09848 1927 aa10.51□□□□□ -0.73
NUP85-223ENST00000583877 CCER2I3L3R5 266 aa10.51□□□□□ -0.73
NUP85-223ENST00000583877 DUSP11O75319 330 aaKnown RBP10.51□□□□□ -0.73
NUP85-223ENST00000583877 RLBP1P12271 317 aa10.51□□□□□ -0.73
NUP85-223ENST00000583877 CST5P28325 142 aaPredicted RBP10.51□□□□□ -0.73
NUP85-223ENST00000583877 PPIGQ13427 754 aaKnown RBP eCLIP10.51□□□□□ -0.736e-8■■■□□ 16.6
NUP85-223ENST00000583877 KCNA10Q16322 511 aa10.51□□□□□ -0.73
NUP85-223ENST00000583877 C12orf60Q5U649 245 aa10.51□□□□□ -0.73
NUP85-223ENST00000583877 CCSAPQ6IQ19 270 aaPredicted RBP10.51□□□□□ -0.73
NUP85-223ENST00000583877 CCDC174Q6PII3 467 aa10.51□□□□□ -0.73
NUP85-223ENST00000583877 MAMDC4Q6UXC1 1216 aa10.51□□□□□ -0.73
NUP85-223ENST00000583877 CLASRPQ8N2M8 674 aaKnown RBP10.51□□□□□ -0.73
NUP85-223ENST00000583877 GAS2L1Q99501 681 aaPredicted RBP10.51□□□□□ -0.73
NUP85-223ENST00000583877 DNAJC2Q99543 621 aaKnown RBP10.51□□□□□ -0.73
NUP85-223ENST00000583877 BCL11AQ9H165 835 aa10.51□□□□□ -0.73
NUP85-223ENST00000583877 IL1RAPL2Q9NP60 686 aa10.51□□□□□ -0.73
NUP85-223ENST00000583877 FAM184BQ9ULE4 1060 aa10.51□□□□□ -0.73
NUP85-223ENST00000583877 ELP1O95163 1332 aa10.51□□□□□ -0.73
NUP85-223ENST00000583877 BRWD1Q9NSI6 2320 aa10.5□□□□□ -0.73
NUP85-223ENST00000583877 DNAJC25-GNG10A0A024R161 153 aa10.5□□□□□ -0.73
NUP85-223ENST00000583877 PRKAB2O43741 272 aa10.5□□□□□ -0.73
NUP85-223ENST00000583877 MBD4O95243 580 aa10.5□□□□□ -0.73
NUP85-223ENST00000583877 SNAI1O95863 264 aaPredicted RBP10.5□□□□□ -0.73
NUP85-223ENST00000583877 COL9A1P20849 921 aa10.5□□□□□ -0.73
NUP85-223ENST00000583877 ADD2P35612 726 aa10.5□□□□□ -0.73
NUP85-223ENST00000583877 CDK7P50613 346 aa10.5□□□□□ -0.73
NUP85-223ENST00000583877 TMEM240Q5SV17 173 aa10.5□□□□□ -0.73
NUP85-223ENST00000583877 FAM83BQ5T0W9 1011 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms