RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 EPHB4P54760 987 aa24.51■■□□□ 1.51
SRSF1-206ENST00000583741 SMAD3P84022 425 aaKnown RBP24.51■■□□□ 1.51
SRSF1-206ENST00000583741 A0A1W2PQ45 241 aaPredicted RBP24.51■■□□□ 1.51
SRSF1-206ENST00000583741 A0A1W2PQY0 241 aa24.51■■□□□ 1.51
SRSF1-206ENST00000583741 CLTBP09497 229 aa24.51■■□□□ 1.51
SRSF1-206ENST00000583741 RNF180Q86T96 592 aa24.51■■□□□ 1.51
SRSF1-206ENST00000583741 DDRGK1Q96HY6 314 aa24.51■■□□□ 1.51
SRSF1-206ENST00000583741 NUP88Q99567 741 aaPredicted RBP24.51■■□□□ 1.51
SRSF1-206ENST00000583741 TACC3Q9Y6A5 838 aa24.51■■□□□ 1.51
SRSF1-206ENST00000583741 ADAMTS4O75173 837 aa24.5■■□□□ 1.51
SRSF1-206ENST00000583741 MUC3AQ02505 3323 aa24.49■■□□□ 1.51
SRSF1-206ENST00000583741 PQBP1O60828 265 aaKnown RBP24.49■■□□□ 1.51
SRSF1-206ENST00000583741 AKR1A1P14550 325 aa24.49■■□□□ 1.51
SRSF1-206ENST00000583741 MAFAQ8NHW3 353 aaPredicted RBP24.49■■□□□ 1.51
SRSF1-206ENST00000583741 MYLIPQ8WY64 445 aa24.49■■□□□ 1.51
SRSF1-206ENST00000583741 MYH4Q9Y623 1939 aa24.49■■□□□ 1.51
SRSF1-206ENST00000583741 MCM3APO60318 1980 aa24.48■■□□□ 1.51
SRSF1-206ENST00000583741 KIAA0355O15063 1070 aa24.48■■□□□ 1.51
SRSF1-206ENST00000583741 ARPP21Q9UBL0 812 aaPredicted RBP24.48■■□□□ 1.51
SRSF1-206ENST00000583741 RASA1P20936 1047 aa24.47■■□□□ 1.51
SRSF1-206ENST00000583741 COPB2P35606 906 aa24.47■■□□□ 1.51
SRSF1-206ENST00000583741 SMC5Q8IY18 1101 aa24.47■■□□□ 1.51
SRSF1-206ENST00000583741 RNPC3Q96LT9 517 aaKnown RBP24.47■■□□□ 1.51
SRSF1-206ENST00000583741 SLF1Q9BQI6 1058 aa24.47■■□□□ 1.51
SRSF1-206ENST00000583741 CNPY2Q9Y2B0 182 aa24.47■■□□□ 1.51
SRSF1-206ENST00000583741 RIPK3Q9Y572 518 aa24.47■■□□□ 1.51
SRSF1-206ENST00000583741 SYNRGQ9UMZ2 1314 aa24.47■■□□□ 1.51
SRSF1-206ENST00000583741 TTC28Q96AY4 2481 aa24.47■■□□□ 1.51
SRSF1-206ENST00000583741 SNRNP48Q6IEG0 339 aaKnown RBP24.46■■□□□ 1.51
SRSF1-206ENST00000583741 STK11IPQ8N1F8 1099 aa24.46■■□□□ 1.51
SRSF1-206ENST00000583741 TEX13BQ9BXU2 312 aa24.46■■□□□ 1.51
SRSF1-206ENST00000583741 SMARCA5O60264 1052 aaPredicted RBP24.45■■□□□ 1.51
SRSF1-206ENST00000583741 SNAI1O95863 264 aaPredicted RBP24.45■■□□□ 1.51
SRSF1-206ENST00000583741 RAG1P15918 1043 aa24.45■■□□□ 1.51
SRSF1-206ENST00000583741 STRBPQ96SI9 672 aaKnown RBP24.45■■□□□ 1.51
SRSF1-206ENST00000583741 DCTPP1Q9H773 170 aa24.45■■□□□ 1.51
SRSF1-206ENST00000583741 NDUFB10O96000 172 aa24.45■■□□□ 1.5
SRSF1-206ENST00000583741 ACLYP53396 1101 aa24.45■■□□□ 1.5
SRSF1-206ENST00000583741 FAAP100Q0VG06 881 aa24.45■■□□□ 1.5
SRSF1-206ENST00000583741 ZSCAN25Q6NSZ9 544 aa24.45■■□□□ 1.5
SRSF1-206ENST00000583741 ANKRD33Q7Z3H0 272 aa24.45■■□□□ 1.5
SRSF1-206ENST00000583741 TMEM39AQ9NV64 488 aa24.45■■□□□ 1.5
SRSF1-206ENST00000583741 SYNGAP1Q96PV0 1343 aa24.44■■□□□ 1.5
SRSF1-206ENST00000583741 DNAJC25-GNG10A0A024R161 153 aa24.44■■□□□ 1.5
SRSF1-206ENST00000583741 MYADML2A6NDP7 307 aa24.44■■□□□ 1.5
SRSF1-206ENST00000583741 GSG1L2A8MUP6 293 aa24.44■■□□□ 1.5
SRSF1-206ENST00000583741 F5H6K3 240 aa24.44■■□□□ 1.5
SRSF1-206ENST00000583741 KLRC3Q07444 240 aa24.44■■□□□ 1.5
SRSF1-206ENST00000583741 SBK1Q52WX2 424 aa24.44■■□□□ 1.5
SRSF1-206ENST00000583741 MSL3Q8N5Y2 521 aaKnown RBP24.44■■□□□ 1.5
SRSF1-206ENST00000583741 TSEN34Q9BSV6 310 aaKnown RBP24.44■■□□□ 1.5
SRSF1-206ENST00000583741 LRRCC1Q9C099 1032 aa24.44■■□□□ 1.5
SRSF1-206ENST00000583741 STARD7Q9NQZ5 370 aa24.44■■□□□ 1.5
SRSF1-206ENST00000583741 NYAP2Q9P242 653 aa24.44■■□□□ 1.5
SRSF1-206ENST00000583741 FOSL2P15408 326 aa24.43■■□□□ 1.5
SRSF1-206ENST00000583741 IRX5P78411 483 aaPredicted RBP24.43■■□□□ 1.5
SRSF1-206ENST00000583741 FPGSQ05932 587 aa24.43■■□□□ 1.5
SRSF1-206ENST00000583741 CCSAPQ6IQ19 270 aaPredicted RBP24.43■■□□□ 1.5
SRSF1-206ENST00000583741 MAMDC4Q6UXC1 1216 aa24.43■■□□□ 1.5
SRSF1-206ENST00000583741 KLHDC9Q8NEP7 349 aa24.43■■□□□ 1.5
SRSF1-206ENST00000583741 TOX2Q96NM4 488 aa24.43■■□□□ 1.5
SRSF1-206ENST00000583741 ZHX1Q9UKY1 873 aaPredicted RBP24.43■■□□□ 1.5
SRSF1-206ENST00000583741 ADCY6O43306 1168 aa24.42■■□□□ 1.5
SRSF1-206ENST00000583741 PRPF38AQ8NAV1 312 aaKnown RBP24.42■■□□□ 1.5
SRSF1-206ENST00000583741 DDX11Q96FC9 970 aa24.42■■□□□ 1.5
SRSF1-206ENST00000583741 FAM184BQ9ULE4 1060 aa24.42■■□□□ 1.5
SRSF1-206ENST00000583741 CHD9Q3L8U1 2897 aa24.42■■□□□ 1.5
SRSF1-206ENST00000583741 MINDY4BA8MYZ0 360 aa24.41■■□□□ 1.5
SRSF1-206ENST00000583741 SLC4A3P48751 1232 aa24.41■■□□□ 1.5
SRSF1-206ENST00000583741 KCNA10Q16322 511 aa24.41■■□□□ 1.5
SRSF1-206ENST00000583741 CPXCR1Q8N123 301 aa24.41■■□□□ 1.5
SRSF1-206ENST00000583741 OSBP2Q969R2 916 aa24.41■■□□□ 1.5
SRSF1-206ENST00000583741 MKNK2Q9HBH9 465 aa24.41■■□□□ 1.5
SRSF1-206ENST00000583741 EPB41L4AQ9HCS5 686 aaPredicted RBP24.41■■□□□ 1.5
SRSF1-206ENST00000583741 TMEM265A0A087WTH1 108 aa24.4■■□□□ 1.5
SRSF1-206ENST00000583741 IGKV6D-41A0A0C4DH26 115 aa24.4■■□□□ 1.5
SRSF1-206ENST00000583741 MOXD2PA6NHM9 499 aa24.4■■□□□ 1.5
SRSF1-206ENST00000583741 ATP2A1O14983 1001 aa24.4■■□□□ 1.5
SRSF1-206ENST00000583741 NUP133Q8WUM0 1156 aa24.4■■□□□ 1.5
SRSF1-206ENST00000583741 FGD4Q96M96 766 aa24.4■■□□□ 1.5
SRSF1-206ENST00000583741 ECHDC1Q9NTX5 307 aa24.4■■□□□ 1.5
SRSF1-206ENST00000583741 TBX21Q9UL17 535 aa24.4■■□□□ 1.5
SRSF1-206ENST00000583741 DCDC2CA8MYV0 355 aa24.39■■□□□ 1.5
SRSF1-206ENST00000583741 DUSP11O75319 330 aaKnown RBP24.39■■□□□ 1.5
SRSF1-206ENST00000583741 GIMAP6Q6P9H5 292 aa24.39■■□□□ 1.5
SRSF1-206ENST00000583741 RAVER2Q9HCJ3 691 aaKnown RBP24.39■■□□□ 1.5
SRSF1-206ENST00000583741 CLIP2Q9UDT6 1046 aa24.39■■□□□ 1.5
SRSF1-206ENST00000583741 PRDM1O75626 825 aa24.38■■□□□ 1.49
SRSF1-206ENST00000583741 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.38■■□□□ 1.49
SRSF1-206ENST00000583741 ZNF467Q7Z7K2 595 aaPredicted RBP24.38■■□□□ 1.49
SRSF1-206ENST00000583741 KBTBD3Q8NAB2 608 aa24.38■■□□□ 1.49
SRSF1-206ENST00000583741 KIFC2Q96AC6 838 aa24.38■■□□□ 1.49
SRSF1-206ENST00000583741 SLC38A10Q9HBR0 1119 aa24.38■■□□□ 1.49
SRSF1-206ENST00000583741 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.38■■□□□ 1.49
SRSF1-206ENST00000583741 TIMP1P01033 207 aa24.38■■□□□ 1.49
SRSF1-206ENST00000583741 DNAJB2P25686 324 aa24.38■■□□□ 1.49
SRSF1-206ENST00000583741 CST5P28325 142 aaPredicted RBP24.38■■□□□ 1.49
SRSF1-206ENST00000583741 ACVR2BQ13705 512 aa24.38■■□□□ 1.49
SRSF1-206ENST00000583741 GRIN2CQ14957 1233 aa24.38■■□□□ 1.49
SRSF1-206ENST00000583741 TSHZ3Q63HK5 1081 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms