RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 CTDP1Q9Y5B0 961 aaPredicted RBP13.49□□□□□ -0.25
CASC3-208ENST00000583649 FAM86C2PA6NEL3 165 aa13.48□□□□□ -0.25
CASC3-208ENST00000583649 GJA9P57773 515 aa13.48□□□□□ -0.25
CASC3-208ENST00000583649 ACVR2BQ13705 512 aa13.48□□□□□ -0.25
CASC3-208ENST00000583649 MAMDC4Q6UXC1 1216 aa13.48□□□□□ -0.25
CASC3-208ENST00000583649 NOL8Q76FK4 1167 aaKnown RBP13.48□□□□□ -0.25
CASC3-208ENST00000583649 AMOTL1Q8IY63 956 aa13.48□□□□□ -0.25
CASC3-208ENST00000583649 SPICE1Q8N0Z3 855 aa13.48□□□□□ -0.25
CASC3-208ENST00000583649 LENG1Q96BZ8 264 aaPredicted RBP13.48□□□□□ -0.25
CASC3-208ENST00000583649 MEIS3Q99687 375 aa13.48□□□□□ -0.25
CASC3-208ENST00000583649 VCPKMTQ9H867 229 aa13.48□□□□□ -0.25
CASC3-208ENST00000583649 GOPCQ9HD26 462 aa13.48□□□□□ -0.25
CASC3-208ENST00000583649 TMX2Q9Y320 296 aa13.48□□□□□ -0.25
CASC3-208ENST00000583649 FOCADQ5VW36 1801 aa13.48□□□□□ -0.25
CASC3-208ENST00000583649 A0A1W2PRG0 241 aa13.47□□□□□ -0.25
CASC3-208ENST00000583649 CD4P01730 458 aa13.47□□□□□ -0.25
CASC3-208ENST00000583649 GUCY1A2P33402 732 aa13.47□□□□□ -0.25
CASC3-208ENST00000583649 PLCD1P51178 756 aa13.47□□□□□ -0.25
CASC3-208ENST00000583649 ICA1Q05084 483 aa13.47□□□□□ -0.25
CASC3-208ENST00000583649 MAGEB6Q8N7X4 407 aa13.47□□□□□ -0.25
CASC3-208ENST00000583649 SLC9A7Q96T83 725 aa13.47□□□□□ -0.25
CASC3-208ENST00000583649 TEX13BQ9BXU2 312 aa13.47□□□□□ -0.25
CASC3-208ENST00000583649 CRNKL1Q9BZJ0 848 aaKnown RBP13.47□□□□□ -0.25
CASC3-208ENST00000583649 MCM9Q9NXL9 1143 aa13.47□□□□□ -0.25
CASC3-208ENST00000583649 MYO9BQ13459 2157 aa13.47□□□□□ -0.25
CASC3-208ENST00000583649 VWA5AO00534 786 aa13.46□□□□□ -0.25
CASC3-208ENST00000583649 GNAI2P04899 355 aa13.46□□□□□ -0.25
CASC3-208ENST00000583649 CA3P07451 260 aa13.46□□□□□ -0.25
CASC3-208ENST00000583649 SUPT20HL2P0C7V6 817 aa13.46□□□□□ -0.25
CASC3-208ENST00000583649 SSTR3P32745 418 aaPredicted RBP13.46□□□□□ -0.25
CASC3-208ENST00000583649 ZAP70P43403 619 aa13.46□□□□□ -0.25
CASC3-208ENST00000583649 CCL23P55773 120 aa13.46□□□□□ -0.25
CASC3-208ENST00000583649 PHOSPHO2Q8TCD6 241 aa13.46□□□□□ -0.25
CASC3-208ENST00000583649 CCDC17Q96LX7 622 aa13.46□□□□□ -0.25
CASC3-208ENST00000583649 AP5M1Q9H0R1 490 aa13.46□□□□□ -0.25
CASC3-208ENST00000583649 UPF3AQ9H1J1 476 aaKnown RBP13.46□□□□□ -0.25
CASC3-208ENST00000583649 NOB1Q9ULX3 412 aaKnown RBP13.46□□□□□ -0.25
CASC3-208ENST00000583649 ADAMTS5Q9UNA0 930 aa13.46□□□□□ -0.25
CASC3-208ENST00000583649 A0A0G2JMZ2 1700 aa13.45□□□□□ -0.26
CASC3-208ENST00000583649 MAGEB6P1A0A0J9YX57 407 aa13.45□□□□□ -0.26
CASC3-208ENST00000583649 RAD21O60216 631 aa13.45□□□□□ -0.26
CASC3-208ENST00000583649 CT47B1P0C2W7 299 aaPredicted RBP13.45□□□□□ -0.26
CASC3-208ENST00000583649 GABPAQ06546 454 aa13.45□□□□□ -0.26
CASC3-208ENST00000583649 ITGA7Q13683 1181 aa13.45□□□□□ -0.26
CASC3-208ENST00000583649 CCDC144BQ3MJ40 725 aa13.45□□□□□ -0.26
CASC3-208ENST00000583649 TNNI3KQ59H18 835 aa13.45□□□□□ -0.26
CASC3-208ENST00000583649 GJD3Q8N144 294 aa13.45□□□□□ -0.26
CASC3-208ENST00000583649 ARNTL2Q8WYA1 636 aa13.45□□□□□ -0.26
CASC3-208ENST00000583649 PIH1D3Q9NQM4 214 aaKnown RBP13.45□□□□□ -0.26
CASC3-208ENST00000583649 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.45□□□□□ -0.26
CASC3-208ENST00000583649 LMCD1Q9NZU5 365 aa13.45□□□□□ -0.26
CASC3-208ENST00000583649 PPP1R9AQ9ULJ8 1098 aa13.45□□□□□ -0.26
CASC3-208ENST00000583649 FPGT-TNNI3KV9GXZ4 949 aa13.45□□□□□ -0.26
CASC3-208ENST00000583649 PIEZO1Q92508 2521 aa13.45□□□□□ -0.26
CASC3-208ENST00000583649 MYH1P12882 1939 aa13.45□□□□□ -0.26
CASC3-208ENST00000583649 XIRP2A4UGR9 3374 aa13.45□□□□□ -0.26
CASC3-208ENST00000583649 SMCHD1A6NHR9 2005 aa13.44□□□□□ -0.26
CASC3-208ENST00000583649 MYADML2A6NDP7 307 aa13.44□□□□□ -0.26
CASC3-208ENST00000583649 ANP32CO43423 234 aa13.44□□□□□ -0.26
CASC3-208ENST00000583649 SNAI1O95863 264 aaPredicted RBP13.44□□□□□ -0.26
CASC3-208ENST00000583649 MYOGP15173 224 aa13.44□□□□□ -0.26
CASC3-208ENST00000583649 PUS10Q3MIT2 529 aaKnown RBP13.44□□□□□ -0.26
CASC3-208ENST00000583649 ANKRD35Q8N283 1001 aa13.44□□□□□ -0.26
CASC3-208ENST00000583649 DDRGK1Q96HY6 314 aa13.44□□□□□ -0.26
CASC3-208ENST00000583649 DBNDD2Q9BQY9 259 aa13.44□□□□□ -0.26
CASC3-208ENST00000583649 C11orf16Q9NQ32 467 aa13.44□□□□□ -0.26
CASC3-208ENST00000583649 FBXO40Q9UH90 709 aa13.44□□□□□ -0.26
CASC3-208ENST00000583649 RFC2P35250 354 aa13.43□□□□□ -0.26
CASC3-208ENST00000583649 NHLH1Q02575 133 aa13.43□□□□□ -0.26
CASC3-208ENST00000583649 TNFAIP2Q03169 654 aa13.43□□□□□ -0.26
CASC3-208ENST00000583649 TTF1Q15361 905 aaPredicted RBP13.43□□□□□ -0.26
CASC3-208ENST00000583649 SNRNP48Q6IEG0 339 aaKnown RBP13.43□□□□□ -0.26
CASC3-208ENST00000583649 FAM9BQ8IZU0 186 aa13.43□□□□□ -0.26
CASC3-208ENST00000583649 NOC4LQ9BVI4 516 aaKnown RBP13.43□□□□□ -0.26
CASC3-208ENST00000583649 KANSL2Q9H9L4 492 aa13.43□□□□□ -0.26
CASC3-208ENST00000583649 CERS4Q9HA82 394 aa13.43□□□□□ -0.26
CASC3-208ENST00000583649 ZNF214Q9UL59 606 aaPredicted RBP13.43□□□□□ -0.26
CASC3-208ENST00000583649 FAM50BQ9Y247 325 aa13.43□□□□□ -0.26
CASC3-208ENST00000583649 CDK5RAP2Q96SN8 1893 aa13.42□□□□□ -0.26
CASC3-208ENST00000583649 LRRC37A2A6NM11 1700 aa13.42□□□□□ -0.26
CASC3-208ENST00000583649 RFXAPO00287 272 aa13.42□□□□□ -0.26
CASC3-208ENST00000583649 ZBED4O75132 1171 aa13.42□□□□□ -0.26
CASC3-208ENST00000583649 NKX3-2P78367 333 aa13.42□□□□□ -0.26
CASC3-208ENST00000583649 CXCL17Q6UXB2 119 aa13.42□□□□□ -0.26
CASC3-208ENST00000583649 SLC43A3Q8NBI5 491 aa13.42□□□□□ -0.26
CASC3-208ENST00000583649 SLF1Q9BQI6 1058 aa13.42□□□□□ -0.26
CASC3-208ENST00000583649 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.42□□□□□ -0.26
CASC3-208ENST00000583649 ZNF536O15090 1300 aa13.41□□□□□ -0.26
CASC3-208ENST00000583649 DNAJC25-GNG10A0A024R161 153 aa13.41□□□□□ -0.26
CASC3-208ENST00000583649 SLC4A3P48751 1232 aa13.41□□□□□ -0.26
CASC3-208ENST00000583649 FSCN1Q16658 493 aaKnown RBP13.41□□□□□ -0.26
CASC3-208ENST00000583649 KIAA1755Q5JYT7 1200 aa13.41□□□□□ -0.26
CASC3-208ENST00000583649 ARMCX2Q7L311 632 aa13.41□□□□□ -0.26
CASC3-208ENST00000583649 PRPF38AQ8NAV1 312 aaKnown RBP13.41□□□□□ -0.26
CASC3-208ENST00000583649 RETREG2Q8NC44 543 aa13.41□□□□□ -0.26
CASC3-208ENST00000583649 ARHGAP45Q92619 1136 aa13.41□□□□□ -0.26
CASC3-208ENST00000583649 ASB14A6NK59 587 aa13.4□□□□□ -0.26
CASC3-208ENST00000583649 IPO8O15397 1037 aaKnown RBP13.4□□□□□ -0.26
CASC3-208ENST00000583649 B4GALT4O60513 344 aa13.4□□□□□ -0.26
CASC3-208ENST00000583649 KCNJ6P48051 423 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms