RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.58□□□□□ -0.56
MKS1-212ENST00000583577 MROH7-TTC4A0A0A0MT08 1334 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 FAM196BA6NMK8 535 aa11.57□□□□□ -0.56
MKS1-212ENST00000583577 OFD1O75665 1012 aa11.57□□□□□ -0.56
MKS1-212ENST00000583577 GLRX3O76003 335 aaKnown RBP11.57□□□□□ -0.56
MKS1-212ENST00000583577 HERVK_113P62684 666 aa11.57□□□□□ -0.56
MKS1-212ENST00000583577 ERVK-9P63128 1117 aa11.57□□□□□ -0.56
MKS1-212ENST00000583577 ERVK-24P63145 666 aa11.57□□□□□ -0.56
MKS1-212ENST00000583577 MAP3K10Q02779 954 aa11.57□□□□□ -0.56
MKS1-212ENST00000583577 WDR78Q5VTH9 848 aa11.57□□□□□ -0.56
MKS1-212ENST00000583577 CAVIN1Q6NZI2 390 aaKnown RBP11.57□□□□□ -0.56
MKS1-212ENST00000583577 TMED8Q6PL24 325 aaPredicted RBP11.57□□□□□ -0.56
MKS1-212ENST00000583577 MTERF4Q7Z6M4 381 aaKnown RBP11.57□□□□□ -0.56
MKS1-212ENST00000583577 OTUD7AQ8TE49 926 aaPredicted RBP11.57□□□□□ -0.56
MKS1-212ENST00000583577 UBE2Q2Q8WVN8 375 aa11.57□□□□□ -0.56
MKS1-212ENST00000583577 FAM163AQ96GL9 167 aaPredicted RBP11.57□□□□□ -0.56
MKS1-212ENST00000583577 ZSCAN31Q96LW9 406 aaPredicted RBP11.57□□□□□ -0.56
MKS1-212ENST00000583577 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.57□□□□□ -0.56
MKS1-212ENST00000583577 TM6SF1Q9BZW5 370 aa11.57□□□□□ -0.56
MKS1-212ENST00000583577 RBPJLQ9UBG7 517 aa11.57□□□□□ -0.56
MKS1-212ENST00000583577 GAKO14976 1311 aa11.57□□□□□ -0.56
MKS1-212ENST00000583577 C5orf42Q9H799 3197 aa11.57□□□□□ -0.56
MKS1-212ENST00000583577 ENTPD3O75355 529 aa11.56□□□□□ -0.56
MKS1-212ENST00000583577 BTDP43251 543 aa11.56□□□□□ -0.56
MKS1-212ENST00000583577 PICALMQ13492 652 aa11.56□□□□□ -0.56
MKS1-212ENST00000583577 TSHZ3Q63HK5 1081 aa11.56□□□□□ -0.56
MKS1-212ENST00000583577 TMEM39AQ9NV64 488 aa11.56□□□□□ -0.56
MKS1-212ENST00000583577 MSRAQ9UJ68 235 aa11.56□□□□□ -0.56
MKS1-212ENST00000583577 ZDHHC9Q9Y397 364 aa11.56□□□□□ -0.56
MKS1-212ENST00000583577 RAD50Q92878 1312 aa11.56□□□□□ -0.56
MKS1-212ENST00000583577 WDR87Q6ZQQ6 2873 aa11.55□□□□□ -0.56
MKS1-212ENST00000583577 ZNFX1Q9P2E3 1918 aaKnown RBP11.55□□□□□ -0.56
MKS1-212ENST00000583577 GPR75-ASB3A0A0A6YYF3 556 aa11.55□□□□□ -0.56
MKS1-212ENST00000583577 KIAA0355O15063 1070 aa11.55□□□□□ -0.56
MKS1-212ENST00000583577 PQBP1O60828 265 aaKnown RBP11.55□□□□□ -0.56
MKS1-212ENST00000583577 PRPF40AO75400 957 aaKnown RBP11.55□□□□□ -0.56
MKS1-212ENST00000583577 BAG3O95817 575 aa11.55□□□□□ -0.56
MKS1-212ENST00000583577 CYP7A1P22680 504 aa11.55□□□□□ -0.56
MKS1-212ENST00000583577 ZSCAN25Q6NSZ9 544 aa11.55□□□□□ -0.56
MKS1-212ENST00000583577 KIAA1211Q6ZU35 1233 aa11.55□□□□□ -0.56
MKS1-212ENST00000583577 MAGEB6Q8N7X4 407 aa11.55□□□□□ -0.56
MKS1-212ENST00000583577 ZNF384Q8TF68 577 aa11.55□□□□□ -0.56
MKS1-212ENST00000583577 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.55□□□□□ -0.56
MKS1-212ENST00000583577 NKX2-4Q9H2Z4 354 aa11.55□□□□□ -0.56
MKS1-212ENST00000583577 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.55□□□□□ -0.56
MKS1-212ENST00000583577 ANO2Q9NQ90 1003 aa11.55□□□□□ -0.56
MKS1-212ENST00000583577 SH2B1Q9NRF2 756 aaPredicted RBP11.55□□□□□ -0.56
MKS1-212ENST00000583577 FOXD4L1Q9NU39 408 aa11.55□□□□□ -0.56
MKS1-212ENST00000583577 TMOD4Q9NZQ9 345 aa11.55□□□□□ -0.56
MKS1-212ENST00000583577 MYH8P13535 1937 aa11.54□□□□□ -0.56
MKS1-212ENST00000583577 BAZ2AQ9UIF9 1905 aaKnown RBP11.54□□□□□ -0.56
MKS1-212ENST00000583577 USP17L5A8MUK1 530 aa11.54□□□□□ -0.56
MKS1-212ENST00000583577 TRIM6-TRIM34B2RNG4 842 aa11.54□□□□□ -0.56
MKS1-212ENST00000583577 SGSM2O43147 1006 aa11.54□□□□□ -0.56
MKS1-212ENST00000583577 MAP4K4O95819 1239 aaPredicted RBP11.54□□□□□ -0.56
MKS1-212ENST00000583577 TPM3P06753 285 aa11.54□□□□□ -0.56
MKS1-212ENST00000583577 PLCG2P16885 1265 aa11.54□□□□□ -0.56
MKS1-212ENST00000583577 MTMR2Q13614 643 aa11.54□□□□□ -0.56
MKS1-212ENST00000583577 LRRFIP1Q32MZ4 808 aaKnown RBP11.54□□□□□ -0.56
MKS1-212ENST00000583577 SH3D19Q5HYK7 790 aa11.54□□□□□ -0.56
MKS1-212ENST00000583577 SLC9C2Q5TAH2 1124 aa11.54□□□□□ -0.56
MKS1-212ENST00000583577 C1orf53Q5VUE5 145 aa11.54□□□□□ -0.56
MKS1-212ENST00000583577 PI4K2BQ8TCG2 481 aa11.54□□□□□ -0.56
MKS1-212ENST00000583577 KCNB2Q92953 911 aa11.54□□□□□ -0.56
MKS1-212ENST00000583577 IDI2Q9BXS1 227 aa11.54□□□□□ -0.56
MKS1-212ENST00000583577 NAV1Q8NEY1 1877 aa11.54□□□□□ -0.56
MKS1-212ENST00000583577 RIF1Q5UIP0 2472 aaKnown RBP11.54□□□□□ -0.56
MKS1-212ENST00000583577 PRR33A8MZF0 331 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 PI4K2BG5E9Z4 385 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 TLL1O43897 1013 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 CYBAP13498 195 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 PDE6AP16499 860 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 HOXA7P31268 230 aaPredicted RBP11.53□□□□□ -0.56
MKS1-212ENST00000583577 LRRC41Q15345 812 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 RAB30Q15771 203 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 CERS3Q8IU89 383 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 KBTBD3Q8NAB2 608 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 SLC44A5Q8NCS7 719 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 NPLOC4Q8TAT6 608 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 RILPL2Q969X0 211 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 FBXL18Q96ME1 805 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 OSBPL5Q9H0X9 879 aaPredicted RBP11.53□□□□□ -0.56
MKS1-212ENST00000583577 TSPY26PQ9H489 355 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 SLC28A3Q9HAS3 691 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 AS3MTQ9HBK9 375 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 DDX4Q9NQI0 724 aaKnown RBP11.53□□□□□ -0.56
MKS1-212ENST00000583577 AATFQ9NY61 560 aaKnown RBP eCLIP11.53□□□□□ -0.56
MKS1-212ENST00000583577 ZKSCAN5Q9Y2L8 839 aa11.53□□□□□ -0.56
MKS1-212ENST00000583577 ADD2P35612 726 aa11.52□□□□□ -0.57
MKS1-212ENST00000583577 PPP4CP60510 307 aa11.52□□□□□ -0.57
MKS1-212ENST00000583577 TMEM240Q5SV17 173 aa11.52□□□□□ -0.57
MKS1-212ENST00000583577 TEX11Q8IYF3 940 aa11.52□□□□□ -0.57
MKS1-212ENST00000583577 GPT2Q8TD30 523 aa11.52□□□□□ -0.57
MKS1-212ENST00000583577 HERVK_113Q902F9 699 aa11.52□□□□□ -0.57
MKS1-212ENST00000583577 ALDH8A1Q9H2A2 487 aaPredicted RBP11.52□□□□□ -0.57
MKS1-212ENST00000583577 LIMCH1Q9UPQ0 1083 aa11.52□□□□□ -0.57
MKS1-212ENST00000583577 ZNF532Q9HCE3 1301 aa11.52□□□□□ -0.57
MKS1-212ENST00000583577 RFX7Q2KHR2 1363 aa11.52□□□□□ -0.57
MKS1-212ENST00000583577 MAGEB6P1A0A0J9YX57 407 aa11.51□□□□□ -0.57
MKS1-212ENST00000583577 SLC15A5A6NIM6 579 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms