RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 FGFR2P21802 821 aa6.52□□□□□ -1.36
RTTN-209ENST00000583043 CCNE1P24864 410 aa6.52□□□□□ -1.36
RTTN-209ENST00000583043 KRT9P35527 623 aa6.52□□□□□ -1.36
RTTN-209ENST00000583043 RAB11FIP4Q86YS3 637 aa6.52□□□□□ -1.36
RTTN-209ENST00000583043 LCORLQ8N3X6 602 aa6.52□□□□□ -1.36
RTTN-209ENST00000583043 SECISBP2LQ93073 1101 aaKnown RBP6.52□□□□□ -1.36
RTTN-209ENST00000583043 ZHX3Q9H4I2 956 aa6.52□□□□□ -1.36
RTTN-209ENST00000583043 BCL2L12Q9HB09 334 aa6.52□□□□□ -1.36
RTTN-209ENST00000583043 SPEF2Q9C093 1822 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 SPATA31A1Q5TZJ5 1347 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 SMCO2A6NFE2 343 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 PNOCQ13519 176 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 CCDC122Q5T0U0 273 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 OTUD7BQ6GQQ9 843 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 MPNDQ8N594 471 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 CPLX3Q8WVH0 158 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 RUNDC3BQ96NL0 473 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 CDC23Q9UJX2 597 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 MTMR7Q9Y216 660 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 ZNF569Q5MCW4 686 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 C11orf57Q6ZUT1 292 aaPredicted RBP6.52□□□□□ -1.37
RTTN-209ENST00000583043 STOX1Q6ZVD7 989 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 TBC1D10CQ8IV04 446 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 FOXP4Q8IVH2 680 aaPredicted RBP6.52□□□□□ -1.37
RTTN-209ENST00000583043 STK11IPQ8N1F8 1099 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 IGDCC4Q8TDY8 1250 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 MKRN1Q9UHC7 482 aaKnown RBP6.52□□□□□ -1.37
RTTN-209ENST00000583043 BCL9O00512 1426 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 PHRF1Q9P1Y6 1649 aaKnown RBP6.52□□□□□ -1.37
RTTN-209ENST00000583043 CCDC151A5D8V7 595 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 KLRF2D3W0D1 207 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 CAMTA2O94983 1202 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 COPB1P53618 953 aaKnown RBP6.52□□□□□ -1.37
RTTN-209ENST00000583043 MAIP1Q8WWC4 291 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.52□□□□□ -1.37
RTTN-209ENST00000583043 SYMPKQ92797 1274 aaKnown RBP6.52□□□□□ -1.37
RTTN-209ENST00000583043 CCSER1Q9C0I3 900 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 VPS54Q9P1Q0 977 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 MAN1B1Q9UKM7 699 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 KCNJ14Q9UNX9 436 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 FLOT1O75955 427 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 ATP2C1P98194 919 aaPredicted RBP6.52□□□□□ -1.37
RTTN-209ENST00000583043 PTGDRQ13258 359 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 CACTINQ8WUQ7 758 aaKnown RBP6.52□□□□□ -1.37
RTTN-209ENST00000583043 KANSL2Q9H9L4 492 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 JADE2Q9NQC1 790 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 DNM3Q9UQ16 869 aa6.52□□□□□ -1.37
RTTN-209ENST00000583043 PPP4CP60510 307 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 ZBED6P86452 979 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 LETM2Q2VYF4 491 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 CTR9Q6PD62 1173 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 MYOCDQ8IZQ8 938 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 DCAF4Q8WV16 495 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 LRRC45Q96CN5 670 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 PPP1R13BQ96KQ4 1090 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 FANCLQ9NW38 375 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 FAM13AO94988 1023 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 MTMR3Q13615 1198 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 DPCR1Q3MIW9 517 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 DPP8Q6V1X1 898 aaPredicted RBP6.51□□□□□ -1.37
RTTN-209ENST00000583043 NBPF11Q86T75 865 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 JAKMIP2Q96AA8 810 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 CEP63Q96MT8 703 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 CRAMP1Q96RY5 1269 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 CSRNP2Q9H175 543 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 CCT6AP40227 531 aaKnown RBP6.51□□□□□ -1.37
RTTN-209ENST00000583043 NEDD1Q8NHV4 660 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 CCDC26Q8TAB7 109 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 SNX29Q8TEQ0 813 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 GOPCQ9HD26 462 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 LCMT1Q9UIC8 334 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 USP21Q9UK80 565 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 MINPP1Q9UNW1 487 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 UBN2Q6ZU65 1347 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 KIF13AQ9H1H9 1805 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 NTSR2O95665 410 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 TTLL1O95922 423 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 RXRAP19793 462 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 GYG1P46976 350 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 PDIA5Q14554 519 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 FBXO33Q7Z6M2 555 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 C8orf37Q96NL8 207 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 NDUFB9Q9Y6M9 179 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 SCP2P22307 547 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 MFSD14BQ5SR56 506 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 C15orf52Q6ZUT6 534 aaKnown RBP6.51□□□□□ -1.37
RTTN-209ENST00000583043 SRGAP1Q7Z6B7 1085 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 IFT20Q8IY31 132 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 DDX17Q92841 729 aaKnown RBP6.51□□□□□ -1.37
RTTN-209ENST00000583043 P2RX5Q93086 422 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 ZKSCAN3Q9BRR0 538 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 PHF20Q9BVI0 1012 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 NID2Q14112 1375 aa6.51□□□□□ -1.37
RTTN-209ENST00000583043 ZNF335Q9H4Z2 1342 aaPredicted RBP6.5□□□□□ -1.37
RTTN-209ENST00000583043 CCNT1O60563 726 aaKnown RBP6.5□□□□□ -1.37
RTTN-209ENST00000583043 FDX1P10109 184 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 BTDP43251 543 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 HLFQ16534 295 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 MAN2A1Q16706 1144 aa6.5□□□□□ -1.37
RTTN-209ENST00000583043 CCDC174Q6PII3 467 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms