RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 SAMD1Q6SPF0 538 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-214ENST00000582981 KIRREL3Q8IZU9 778 aa11.79□□□□□ -0.52
TOP3A-214ENST00000582981 MTRQ99707 1265 aa11.79□□□□□ -0.52
TOP3A-214ENST00000582981 KRT23Q9C075 422 aa11.79□□□□□ -0.52
TOP3A-214ENST00000582981 BTG4Q9NY30 223 aa11.79□□□□□ -0.52
TOP3A-214ENST00000582981 FAM170AA1A519 330 aa11.79□□□□□ -0.52
TOP3A-214ENST00000582981 GOLGA6CA6NDK9 693 aa11.79□□□□□ -0.52
TOP3A-214ENST00000582981 GOLGA6DP0CG33 693 aa11.79□□□□□ -0.52
TOP3A-214ENST00000582981 ELF1P32519 619 aa11.79□□□□□ -0.52
TOP3A-214ENST00000582981 KRT9P35527 623 aa11.79□□□□□ -0.52
TOP3A-214ENST00000582981 GGCXP38435 758 aa11.79□□□□□ -0.52
TOP3A-214ENST00000582981 KLK7P49862 253 aa11.79□□□□□ -0.52
TOP3A-214ENST00000582981 ACTN3Q08043 901 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-214ENST00000582981 NEDD9Q14511 834 aa11.79□□□□□ -0.52
TOP3A-214ENST00000582981 TMED8Q6PL24 325 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-214ENST00000582981 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-214ENST00000582981 OTUD6BQ8N6M0 293 aa11.79□□□□□ -0.52
TOP3A-214ENST00000582981 MSANTD4Q8NCY6 345 aa11.79□□□□□ -0.52
TOP3A-214ENST00000582981 GOLGA6AQ9NYA3 693 aa11.79□□□□□ -0.52
TOP3A-214ENST00000582981 ABCC12Q96J65 1359 aa11.78□□□□□ -0.52
TOP3A-214ENST00000582981 FAM237AA0A1B0GTK4 181 aa11.78□□□□□ -0.52
TOP3A-214ENST00000582981 PPP1R3GB7ZBB8 358 aa11.78□□□□□ -0.52
TOP3A-214ENST00000582981 UQCRFS1P1P0C7P4 283 aa11.78□□□□□ -0.52
TOP3A-214ENST00000582981 WASF1Q92558 559 aa11.78□□□□□ -0.52
TOP3A-214ENST00000582981 FOXP1Q9H334 677 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-214ENST00000582981 VEZTQ9HBM0 779 aa11.78□□□□□ -0.52
TOP3A-214ENST00000582981 KIF1AQ12756 1690 aa11.78□□□□□ -0.52
TOP3A-214ENST00000582981 ZNF335Q9H4Z2 1342 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-214ENST00000582981 SSBP05455 408 aaKnown RBP eCLIP11.78□□□□□ -0.52
TOP3A-214ENST00000582981 KRT2P35908 639 aa11.78□□□□□ -0.52
TOP3A-214ENST00000582981 IRAK1P51617 712 aa11.78□□□□□ -0.52
TOP3A-214ENST00000582981 STIM1Q13586 685 aa11.78□□□□□ -0.52
TOP3A-214ENST00000582981 TTC38Q5R3I4 469 aa11.78□□□□□ -0.52
TOP3A-214ENST00000582981 RNF187Q5TA31 235 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-214ENST00000582981 SPATA1Q5VX52 437 aa11.78□□□□□ -0.52
TOP3A-214ENST00000582981 POTEDQ86YR6 584 aa11.78□□□□□ -0.52
TOP3A-214ENST00000582981 DACH1Q9UI36 760 aa11.78□□□□□ -0.52
TOP3A-214ENST00000582981 MYH8P13535 1937 aa11.78□□□□□ -0.52
TOP3A-214ENST00000582981 USP17L12C9JPN9 530 aa11.77□□□□□ -0.52
TOP3A-214ENST00000582981 USP17L21D6R901 530 aa11.77□□□□□ -0.52
TOP3A-214ENST00000582981 CYP19A1P11511 503 aaPredicted RBP11.77□□□□□ -0.52
TOP3A-214ENST00000582981 DNA2P51530 1060 aa11.77□□□□□ -0.52
TOP3A-214ENST00000582981 PMS1P54277 932 aaKnown RBP11.77□□□□□ -0.52
TOP3A-214ENST00000582981 GNGT1P63211 74 aa11.77□□□□□ -0.52
TOP3A-214ENST00000582981 UBXN1Q04323 297 aa11.77□□□□□ -0.52
TOP3A-214ENST00000582981 CHRNDQ07001 517 aa11.77□□□□□ -0.52
TOP3A-214ENST00000582981 C3orf67Q6ZVT6 689 aa11.77□□□□□ -0.52
TOP3A-214ENST00000582981 HPS3Q969F9 1004 aa11.77□□□□□ -0.52
TOP3A-214ENST00000582981 PPP1R12AO14974 1030 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-214ENST00000582981 FGFR2P21802 821 aa11.77□□□□□ -0.53
TOP3A-214ENST00000582981 NLRP5P59047 1200 aa11.77□□□□□ -0.53
TOP3A-214ENST00000582981 CCDC148Q8NFR7 591 aa11.77□□□□□ -0.53
TOP3A-214ENST00000582981 MIEF2Q96C03 454 aa11.77□□□□□ -0.53
TOP3A-214ENST00000582981 AATFQ9NY61 560 aaKnown RBP eCLIP11.77□□□□□ -0.53
TOP3A-214ENST00000582981 TFCP2L1Q9NZI6 479 aa11.77□□□□□ -0.53
TOP3A-214ENST00000582981 ODF2LQ9ULJ1 636 aa11.77□□□□□ -0.53
TOP3A-214ENST00000582981 CDHR2Q9BYE9 1310 aa11.77□□□□□ -0.53
TOP3A-214ENST00000582981 TRIM28Q13263 835 aaKnown RBP11.77□□□□□ -0.53
TOP3A-214ENST00000582981 IL17AQ16552 155 aa11.77□□□□□ -0.53
TOP3A-214ENST00000582981 FILIP1LQ4L180 1135 aa11.77□□□□□ -0.53
TOP3A-214ENST00000582981 FAM43BQ6ZT52 329 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-214ENST00000582981 ZNF526Q8TF50 670 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-214ENST00000582981 NELFBQ8WX92 580 aa11.77□□□□□ -0.53
TOP3A-214ENST00000582981 PLA2G12BQ9BX93 195 aa11.77□□□□□ -0.53
TOP3A-214ENST00000582981 CNNM2Q9H8M5 875 aa11.77□□□□□ -0.53
TOP3A-214ENST00000582981 DUSP10Q9Y6W6 482 aa11.77□□□□□ -0.53
TOP3A-214ENST00000582981 WDR19Q8NEZ3 1342 aa11.76□□□□□ -0.53
TOP3A-214ENST00000582981 MAGEB6P1A0A0J9YX57 407 aa11.76□□□□□ -0.53
TOP3A-214ENST00000582981 NDUFAB1O14561 156 aa11.76□□□□□ -0.53
TOP3A-214ENST00000582981 ZNF185O15231 689 aa11.76□□□□□ -0.53
TOP3A-214ENST00000582981 CYP27A1Q02318 531 aa11.76□□□□□ -0.53
TOP3A-214ENST00000582981 SRBD1Q8N5C6 995 aaKnown RBP11.76□□□□□ -0.53
TOP3A-214ENST00000582981 STAG1Q8WVM7 1258 aa11.76□□□□□ -0.53
TOP3A-214ENST00000582981 CAPS2Q9BXY5 557 aa11.76□□□□□ -0.53
TOP3A-214ENST00000582981 NIP7Q9Y221 180 aaKnown RBP eCLIP11.76□□□□□ -0.53
TOP3A-214ENST00000582981 KDM4FA0A1W2PPD8 638 aa11.76□□□□□ -0.53
TOP3A-214ENST00000582981 ZEB2O60315 1214 aa11.76□□□□□ -0.53
TOP3A-214ENST00000582981 SARNPP82979 210 aaKnown RBP11.76□□□□□ -0.53
TOP3A-214ENST00000582981 MAP9Q49MG5 647 aa11.76□□□□□ -0.53
TOP3A-214ENST00000582981 SMCR8Q8TEV9 937 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-214ENST00000582981 ESR2Q92731 530 aa11.76□□□□□ -0.53
TOP3A-214ENST00000582981 PCMTD1Q96MG8 357 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-214ENST00000582981 SMARCAL1Q9NZC9 954 aa11.76□□□□□ -0.53
TOP3A-214ENST00000582981 MYH2Q9UKX2 1941 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 SKAP2O75563 359 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-214ENST00000582981 PRPF6O94906 941 aaKnown RBP11.75□□□□□ -0.53
TOP3A-214ENST00000582981 MATR3P43243 847 aaKnown RBP eCLIP11.75□□□□□ -0.53
TOP3A-214ENST00000582981 ZSCAN10Q96SZ4 725 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-214ENST00000582981 ABHD10Q9NUJ1 306 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-214ENST00000582981 STK36Q9NRP7 1315 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 MACROD2A1Z1Q3 448 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 PRCPP42785 496 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 COPB1P53618 953 aaKnown RBP11.75□□□□□ -0.53
TOP3A-214ENST00000582981 NT5DC1Q5TFE4 455 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 CATIPQ7Z7H3 387 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 ZKSCAN4Q969J2 545 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-214ENST00000582981 HPCAL4Q9UM19 191 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 CEP131Q9UPN4 1083 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 FAM205AQ6ZU69 1335 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms