RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	MTUS1	Q9ULD2	1270 aa		6.57	□□□□□ -1.36
MSI2-216	ENST00000582772	MAPK8IP3	Q9UPT6	1336 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	PATJ	Q8NI35	1801 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772		H3BNC9	293 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	TM4SF5	O14894	197 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	PEX10	O60683	326 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	LRP3	O75074	770 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	BRD1	O95696	1058 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	SP9	P0CG40	484 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	NPR3	P17342	541 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	RFC2	P35250	354 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	IRX3	P78415	501 aa	Predicted RBP	6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	HYAL1	Q12794	435 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	MFSD14B	Q5SR56	506 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	ZNF605	Q86T29	641 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	KREMEN2	Q8NCW0	462 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	MAP4K1	Q92918	833 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	SAMD11	Q96NU1	681 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	RAD9A	Q99638	391 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	SEZ6L	Q9BYH1	1024 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	MFSD1	Q9H3U5	465 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	USP18	Q9UMW8	372 aa		6.56	□□□□□ -1.36
MSI2-216	ENST00000582772	SYNRG	Q9UMZ2	1314 aa		6.55	□□□□□ -1.36
MSI2-216	ENST00000582772	POLQ	O75417	2590 aa		6.55	□□□□□ -1.36
MSI2-216	ENST00000582772	ZNFX1	Q9P2E3	1918 aa	Known RBP	6.55	□□□□□ -1.36
MSI2-216	ENST00000582772	PI15	O43692	258 aa		6.55	□□□□□ -1.36
MSI2-216	ENST00000582772	GJB5	O95377	273 aa		6.55	□□□□□ -1.36
MSI2-216	ENST00000582772	RRP1	P56182	461 aa	Known RBP	6.55	□□□□□ -1.36
MSI2-216	ENST00000582772	CCNA1	P78396	465 aa		6.55	□□□□□ -1.36
MSI2-216	ENST00000582772	APOBEC3H	Q6NTF7	200 aa	Known RBP	6.55	□□□□□ -1.36
MSI2-216	ENST00000582772	SUSD6	Q92537	303 aa		6.55	□□□□□ -1.36
MSI2-216	ENST00000582772	ANKRD2	Q9GZV1	360 aa		6.55	□□□□□ -1.36
MSI2-216	ENST00000582772	EPC1	Q9H2F5	836 aa		6.55	□□□□□ -1.36
MSI2-216	ENST00000582772	MICAL3	Q7RTP6	2002 aa		6.55	□□□□□ -1.36
MSI2-216	ENST00000582772	SHROOM3	Q8TF72	1996 aa		6.55	□□□□□ -1.36
MSI2-216	ENST00000582772	LAMA1	P25391	3075 aa		6.54	□□□□□ -1.36
MSI2-216	ENST00000582772	PDE8A	O60658	829 aa		6.54	□□□□□ -1.36
MSI2-216	ENST00000582772	LIMK1	P53667	647 aa		6.54	□□□□□ -1.36
MSI2-216	ENST00000582772	HMGCS2	P54868	508 aa		6.54	□□□□□ -1.36
MSI2-216	ENST00000582772	ADAM15	Q13444	863 aa		6.54	□□□□□ -1.36
MSI2-216	ENST00000582772	KCNA10	Q16322	511 aa		6.54	□□□□□ -1.36
MSI2-216	ENST00000582772	ZNF528	Q3MIS6	628 aa		6.54	□□□□□ -1.36
MSI2-216	ENST00000582772	ZNF804A	Q7Z570	1209 aa		6.54	□□□□□ -1.36
MSI2-216	ENST00000582772	ZNF280C	Q8ND82	737 aa		6.54	□□□□□ -1.36
MSI2-216	ENST00000582772	SCLY	Q96I15	445 aa		6.54	□□□□□ -1.36
MSI2-216	ENST00000582772	RPGRIP1	Q96KN7	1286 aa		6.54	□□□□□ -1.36
MSI2-216	ENST00000582772	RABGAP1	Q9Y3P9	1069 aa		6.54	□□□□□ -1.36
MSI2-216	ENST00000582772	USP15	Q9Y4E8	981 aa	Predicted RBP	6.54	□□□□□ -1.36
MSI2-216	ENST00000582772	IVNS1ABP	Q9Y6Y0	642 aa		6.54	□□□□□ -1.36
MSI2-216	ENST00000582772	RALGAPA1	Q6GYQ0	2036 aa		6.54	□□□□□ -1.36
MSI2-216	ENST00000582772	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	CNMD	O75829	334 aa		6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	CAPNS1	P04632	268 aa		6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	AR	P10275	920 aa		6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	AKR1A1	P14550	325 aa		6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	EIF4A1	P60842	406 aa	Known RBP	6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	RRP1B	Q14684	758 aa	Known RBP	6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	COL28A1	Q2UY09	1125 aa		6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	CDCA8	Q53HL2	280 aa		6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	ZBTB33	Q86T24	672 aa		6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	PROSER1	Q86XN7	944 aa		6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	PCSK9	Q8NBP7	692 aa	Known RBP	6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	SP7	Q8TDD2	431 aa	Predicted RBP	6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	TEKT1	Q969V4	418 aa		6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	C17orf80	Q9BSJ5	609 aa		6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	THUMPD2	Q9BTF0	503 aa	Known RBP	6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	CWC22	Q9HCG8	908 aa	Known RBP	6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	CLEC1B	Q9P126	229 aa		6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	SMG5	Q9UPR3	1016 aa	Known RBP	6.53	□□□□□ -1.36
MSI2-216	ENST00000582772	MAST3	O60307	1309 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	DOPEY2	Q9Y3R5	2298 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	ASXL3	Q9C0F0	2248 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	STRN	O43815	780 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	FOXD2	O60548	495 aa	Predicted RBP	6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	ASGR1	P07306	291 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	WDR5	P61964	334 aa	Known RBP	6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	EIF4G2	P78344	907 aa	Known RBP eCLIP	6.52	□□□□□ -1.37	2e-6	■■■■■ 31.2
MSI2-216	ENST00000582772	NKX3-2	P78367	333 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	SPP2	Q13103	211 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	TAF7	Q15545	349 aa	Predicted RBP	6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	CCDC6	Q16204	474 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	EPC2	Q52LR7	807 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	PRAMEF19	Q5SWL8	479 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	PPARGC1B	Q86YN6	1023 aa	Known RBP	6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	FLCN	Q8NFG4	579 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	JARID2	Q92833	1246 aa	Predicted RBP	6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	LMAN2L	Q9H0V9	348 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	PCDHGA2	Q9Y5H1	932 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	TSC2	P49815	1807 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	COL6A6	A6NMZ7	2263 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	NF1	P21359	2839 aa		6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	SETD2	Q9BYW2	2564 aa	Predicted RBP	6.52	□□□□□ -1.37
MSI2-216	ENST00000582772	GREB1	Q4ZG55	1949 aa		6.51	□□□□□ -1.37
MSI2-216	ENST00000582772	ADORA2A	P29274	412 aa		6.51	□□□□□ -1.37
MSI2-216	ENST00000582772	KCNJ6	P48051	423 aa		6.51	□□□□□ -1.37
MSI2-216	ENST00000582772	LBX2	Q6XYB7	198 aa		6.51	□□□□□ -1.37
MSI2-216	ENST00000582772	DPP9	Q86TI2	863 aa		6.51	□□□□□ -1.37
MSI2-216	ENST00000582772	LSM14A	Q8ND56	463 aa	Known RBP	6.51	□□□□□ -1.37
MSI2-216	ENST00000582772	XAGE3	Q8WTP9	111 aa		6.51	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms