RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 RAB30Q15771 203 aa9.27□□□□□ -0.93
CCDC47-205ENST00000582331 C16orf59Q7L2K0 433 aa9.27□□□□□ -0.93
CCDC47-205ENST00000582331 ZNF512BQ96KM6 892 aaPredicted RBP9.27□□□□□ -0.93
CCDC47-205ENST00000582331 YTHDC1Q96MU7 727 aaKnown RBP9.27□□□□□ -0.93
CCDC47-205ENST00000582331 MMP19Q99542 508 aa9.27□□□□□ -0.93
CCDC47-205ENST00000582331 DBNDD2Q9BQY9 259 aa9.27□□□□□ -0.93
CCDC47-205ENST00000582331 GPR108Q9NPR9 543 aa9.27□□□□□ -0.93
CCDC47-205ENST00000582331 MSRAQ9UJ68 235 aa9.27□□□□□ -0.93
CCDC47-205ENST00000582331 TBX21Q9UL17 535 aa9.27□□□□□ -0.93
CCDC47-205ENST00000582331 DIS3Q9Y2L1 958 aaKnown RBP9.27□□□□□ -0.93
CCDC47-205ENST00000582331 ARIH1Q9Y4X5 557 aaPredicted RBP9.27□□□□□ -0.93
CCDC47-205ENST00000582331 MOXD2PA6NHM9 499 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 ADAMTS4O75173 837 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 IDH1O75874 414 aaKnown RBP9.26□□□□□ -0.93
CCDC47-205ENST00000582331 FLOT1O75955 427 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 POLR3DP05423 398 aaPredicted RBP9.26□□□□□ -0.93
CCDC47-205ENST00000582331 ZNF865P0CJ78 1059 aaPredicted RBP9.26□□□□□ -0.93
CCDC47-205ENST00000582331 BMP1P13497 986 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 TAL1P17542 331 aaPredicted RBP9.26□□□□□ -0.93
CCDC47-205ENST00000582331 ZNF792Q3KQV3 632 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 TNNI3KQ59H18 835 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 RASIP1Q5U651 963 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 ZNF365Q70YC5 407 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 ZNF687Q8N1G0 1237 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 TMEM199Q8N511 208 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 ATG4CQ96DT6 458 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 NECAB3Q96P71 396 aaPredicted RBP9.26□□□□□ -0.93
CCDC47-205ENST00000582331 SLC28A3Q9HAS3 691 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 GPHNQ9NQX3 736 aaPredicted RBP9.26□□□□□ -0.93
CCDC47-205ENST00000582331 CXXC1Q9P0U4 656 aaPredicted RBP9.26□□□□□ -0.93
CCDC47-205ENST00000582331 FPGT-TNNI3KV9GXZ4 949 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 CHD9Q3L8U1 2897 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 MYH1P12882 1939 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 MROH7Q68CQ1 1323 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 SMCHD1A6NHR9 2005 aa9.26□□□□□ -0.93
CCDC47-205ENST00000582331 PLXNA1Q9UIW2 1896 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 PNMA6EA0A0J9YXQ4 647 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 GNAI2P04899 355 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 PGK2P07205 417 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 ACRP10323 421 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 CSF2RAP15509 400 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 CDK7P50613 346 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 FOXK1P85037 733 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 KCTD2Q14681 263 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 TMEM132BQ14DG7 1078 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 KCNA10Q16322 511 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 AAK1Q2M2I8 961 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 KIAA1755Q5JYT7 1200 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 PSRC1Q6PGN9 363 aaPredicted RBP9.25□□□□□ -0.93
CCDC47-205ENST00000582331 MAGEB6Q8N7X4 407 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 KLHDC9Q8NEP7 349 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 VTI1AQ96AJ9 217 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 LENG1Q96BZ8 264 aaPredicted RBP9.25□□□□□ -0.93
CCDC47-205ENST00000582331 CDCA7LQ96GN5 454 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 GLT1D1Q96MS3 346 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 NKX2-4Q9H2Z4 354 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 FAM184BQ9ULE4 1060 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 CNPY2Q9Y2B0 182 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 HCN4Q9Y3Q4 1203 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 ELP1O95163 1332 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 SYNGAP1Q96PV0 1343 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 SYNRGQ9UMZ2 1314 aa9.25□□□□□ -0.93
CCDC47-205ENST00000582331 ROBO3Q96MS0 1386 aa9.24□□□□□ -0.93
CCDC47-205ENST00000582331 CCER2I3L3R5 266 aa9.24□□□□□ -0.93
CCDC47-205ENST00000582331 APBB1O00213 710 aa9.24□□□□□ -0.93
CCDC47-205ENST00000582331 CT47B1P0C2W7 299 aaPredicted RBP9.24□□□□□ -0.93
CCDC47-205ENST00000582331 GABPAQ06546 454 aa9.24□□□□□ -0.93
CCDC47-205ENST00000582331 MMRN1Q13201 1228 aa9.24□□□□□ -0.93
CCDC47-205ENST00000582331 OS9Q13438 667 aaPredicted RBP9.24□□□□□ -0.93
CCDC47-205ENST00000582331 CCSAPQ6IQ19 270 aaPredicted RBP9.24□□□□□ -0.93
CCDC47-205ENST00000582331 TMEM179Q6ZVK1 233 aa9.24□□□□□ -0.93
CCDC47-205ENST00000582331 RIOX2Q8IUF8 465 aa9.24□□□□□ -0.93
CCDC47-205ENST00000582331 HERVK_113Q902F9 699 aa9.24□□□□□ -0.93
CCDC47-205ENST00000582331 LRFN3Q9BTN0 628 aa9.24□□□□□ -0.93
CCDC47-205ENST00000582331 PPP1R12CQ9BZL4 782 aa9.24□□□□□ -0.93
CCDC47-205ENST00000582331 MTIF3Q9H2K0 278 aaKnown RBP9.24□□□□□ -0.93
CCDC47-205ENST00000582331 SH2D4AQ9H788 454 aa9.24□□□□□ -0.93
CCDC47-205ENST00000582331 ARHGEF10LQ9HCE6 1279 aa9.24□□□□□ -0.93
CCDC47-205ENST00000582331 IL23AQ9NPF7 189 aa9.24□□□□□ -0.93
CCDC47-205ENST00000582331 A0A0G2JMZ2 1700 aa9.24□□□□□ -0.93
CCDC47-205ENST00000582331 MYO5AQ9Y4I1 1855 aaKnown RBP9.23□□□□□ -0.93
CCDC47-205ENST00000582331 REV3LO60673 3130 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 ZNFX1Q9P2E3 1918 aaKnown RBP9.23□□□□□ -0.93
CCDC47-205ENST00000582331 ARVCFO00192 962 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 WDR46O15213 610 aaKnown RBP9.23□□□□□ -0.93
CCDC47-205ENST00000582331 TLR3O15455 904 aaKnown RBP9.23□□□□□ -0.93
CCDC47-205ENST00000582331 DUSP11O75319 330 aaKnown RBP9.23□□□□□ -0.93
CCDC47-205ENST00000582331 FGBP02675 491 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 COPB2P35606 906 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 STAT3P40763 770 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 TFF2Q03403 129 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 TMED8Q6PL24 325 aaPredicted RBP9.23□□□□□ -0.93
CCDC47-205ENST00000582331 SIAH1Q8IUQ4 282 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 SPICE1Q8N0Z3 855 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 MICALL1Q8N3F8 863 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 MSL3Q8N5Y2 521 aaKnown RBP9.23□□□□□ -0.93
CCDC47-205ENST00000582331 PCSK9Q8NBP7 692 aaKnown RBP9.23□□□□□ -0.93
CCDC47-205ENST00000582331 ARHGAP45Q92619 1136 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 EPHX3Q9H6B9 360 aa9.23□□□□□ -0.93
CCDC47-205ENST00000582331 VCPKMTQ9H867 229 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms