RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 KCNK17Q96T54 332 aa7.63□□□□□ -1.19
TVP23B-210ENST00000582288 TINF2Q9BSI4 451 aa7.63□□□□□ -1.19
TVP23B-210ENST00000582288 SLC28A3Q9HAS3 691 aa7.63□□□□□ -1.19
TVP23B-210ENST00000582288 CABP5Q9NP86 173 aa7.63□□□□□ -1.19
TVP23B-210ENST00000582288 STARD7Q9NQZ5 370 aa7.63□□□□□ -1.19
TVP23B-210ENST00000582288 COG5Q9UP83 839 aa7.63□□□□□ -1.19
TVP23B-210ENST00000582288 PA2G4Q9UQ80 394 aaKnown RBP7.63□□□□□ -1.19
TVP23B-210ENST00000582288 PGK1P00558 417 aa7.62□□□□□ -1.19
TVP23B-210ENST00000582288 ZNF865P0CJ78 1059 aaPredicted RBP7.62□□□□□ -1.19
TVP23B-210ENST00000582288 IGFBP4P22692 258 aa7.62□□□□□ -1.19
TVP23B-210ENST00000582288 CST5P28325 142 aaPredicted RBP7.62□□□□□ -1.19
TVP23B-210ENST00000582288 COPB2P35606 906 aa7.62□□□□□ -1.19
TVP23B-210ENST00000582288 MCAMP43121 646 aa7.62□□□□□ -1.19
TVP23B-210ENST00000582288 RAB3GAP1Q15042 981 aa7.62□□□□□ -1.19
TVP23B-210ENST00000582288 ZYXQ15942 572 aaKnown RBP7.62□□□□□ -1.19
TVP23B-210ENST00000582288 CCSAPQ6IQ19 270 aaPredicted RBP7.62□□□□□ -1.19
TVP23B-210ENST00000582288 PI16Q6UXB8 463 aa7.62□□□□□ -1.19
TVP23B-210ENST00000582288 KLHDC9Q8NEP7 349 aa7.62□□□□□ -1.19
TVP23B-210ENST00000582288 TMC2Q8TDI7 906 aa7.62□□□□□ -1.19
TVP23B-210ENST00000582288 SSH1Q8WYL5 1049 aa7.62□□□□□ -1.19
TVP23B-210ENST00000582288 GLT1D1Q96MS3 346 aa7.62□□□□□ -1.19
TVP23B-210ENST00000582288 SEZ6LQ9BYH1 1024 aa7.62□□□□□ -1.19
TVP23B-210ENST00000582288 CDK5RAP2Q96SN8 1893 aa7.62□□□□□ -1.19
TVP23B-210ENST00000582288 GRXCR1A8MXD5 290 aa7.61□□□□□ -1.19
TVP23B-210ENST00000582288 GFRA3O60609 400 aa7.61□□□□□ -1.19
TVP23B-210ENST00000582288 DUSP11O75319 330 aaKnown RBP7.61□□□□□ -1.19
TVP23B-210ENST00000582288 NKX3-2P78367 333 aa7.61□□□□□ -1.19
TVP23B-210ENST00000582288 CCDC85BQ15834 202 aaPredicted RBP7.61□□□□□ -1.19
TVP23B-210ENST00000582288 ZNF792Q3KQV3 632 aa7.61□□□□□ -1.19
TVP23B-210ENST00000582288 ZNF365Q70YC5 407 aa7.61□□□□□ -1.19
TVP23B-210ENST00000582288 ADGRA1Q86SQ6 560 aa7.61□□□□□ -1.19
TVP23B-210ENST00000582288 NCAPG2Q86XI2 1143 aa7.61□□□□□ -1.19
TVP23B-210ENST00000582288 PCSK9Q8NBP7 692 aaKnown RBP7.61□□□□□ -1.19
TVP23B-210ENST00000582288 ACER1Q8TDN7 264 aa7.61□□□□□ -1.19
TVP23B-210ENST00000582288 IL23AQ9NPF7 189 aa7.61□□□□□ -1.19
TVP23B-210ENST00000582288 GPR108Q9NPR9 543 aa7.61□□□□□ -1.19
TVP23B-210ENST00000582288 ADAMTS5Q9UNA0 930 aa7.61□□□□□ -1.19
TVP23B-210ENST00000582288 CNPY2Q9Y2B0 182 aa7.61□□□□□ -1.19
TVP23B-210ENST00000582288 SALL2Q9Y467 1007 aaPredicted RBP7.61□□□□□ -1.19
TVP23B-210ENST00000582288 PLXNA1Q9UIW2 1896 aa7.61□□□□□ -1.19
TVP23B-210ENST00000582288 SYNRGQ9UMZ2 1314 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 ARVCFO00192 962 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 LCE2BO14633 110 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 TLR3O15455 904 aaKnown RBP7.6□□□□□ -1.19
TVP23B-210ENST00000582288 SRGAP3O43295 1099 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 TLL1O43897 1013 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 FGBP02675 491 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 CSF2RAP15509 400 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 GUCY1A2P33402 732 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 SHMT1P34896 483 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 KCTD2Q14681 263 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 CCDC158Q5M9N0 1113 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 MAMDC4Q6UXC1 1216 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 RIOX2Q8IUF8 465 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 FAM126BQ8IXS8 530 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 NECAB3Q96P71 396 aaPredicted RBP7.6□□□□□ -1.19
TVP23B-210ENST00000582288 MMP19Q99542 508 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 SLC4A5Q9BY07 1137 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 TANGO6Q9C0B7 1094 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 KCNH6Q9H252 994 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 EPHX3Q9H6B9 360 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 SH2D4AQ9H788 454 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 SAP30BPQ9UHR5 308 aaKnown RBP7.6□□□□□ -1.19
TVP23B-210ENST00000582288 FAM184BQ9ULE4 1060 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 PCDHA11Q9Y5I1 949 aa7.6□□□□□ -1.19
TVP23B-210ENST00000582288 A0A0U1RQG5 324 aaPredicted RBP7.59□□□□□ -1.19
TVP23B-210ENST00000582288 A0A1W2PRG0 241 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 PRR33A8MZF0 331 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 PI4K2BG5E9Z4 385 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 WDR46O15213 610 aaKnown RBP7.59□□□□□ -1.19
TVP23B-210ENST00000582288 GTPBP6O43824 516 aaPredicted RBP7.59□□□□□ -1.19
TVP23B-210ENST00000582288 CD4P01730 458 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 CYP2E1P05181 493 aaPredicted RBP7.59□□□□□ -1.19
TVP23B-210ENST00000582288 GNAI3P08754 354 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 USP5P45974 858 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 KCNQ1P51787 676 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 GABPAQ06546 454 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 PLS1Q14651 629 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 TMEM132BQ14DG7 1078 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 KCNA10Q16322 511 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 PPP2R2DQ66LE6 453 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 ZNF787Q6DD87 383 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 TMEM179Q6ZVK1 233 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 API5Q9BZZ5 524 aaKnown RBP7.59□□□□□ -1.19
TVP23B-210ENST00000582288 NKX2-4Q9H2Z4 354 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 SPC25Q9HBM1 224 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 MRS2Q9HD23 443 aa7.59□□□□□ -1.19
TVP23B-210ENST00000582288 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.59□□□□□ -1.19
TVP23B-210ENST00000582288 E9PSI1 815 aa7.58□□□□□ -1.2
TVP23B-210ENST00000582288 CABYRO75952 493 aa7.58□□□□□ -1.2
TVP23B-210ENST00000582288 FLOT1O75955 427 aa7.58□□□□□ -1.2
TVP23B-210ENST00000582288 ASGR1P07306 291 aa7.58□□□□□ -1.2
TVP23B-210ENST00000582288 PFKMP08237 780 aa7.58□□□□□ -1.2
TVP23B-210ENST00000582288 CT47B1P0C2W7 299 aaPredicted RBP7.58□□□□□ -1.2
TVP23B-210ENST00000582288 TAL1P17542 331 aaPredicted RBP7.58□□□□□ -1.2
TVP23B-210ENST00000582288 CYP7A1P22680 504 aa7.58□□□□□ -1.2
TVP23B-210ENST00000582288 GJA9P57773 515 aa7.58□□□□□ -1.2
TVP23B-210ENST00000582288 TFF2Q03403 129 aa7.58□□□□□ -1.2
TVP23B-210ENST00000582288 G3BP1Q13283 466 aaKnown RBP eCLIP7.58□□□□□ -1.2
TVP23B-210ENST00000582288 SEPT2Q15019 361 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms