RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 CPXCR1Q8N123 301 aa17.15■□□□□ 0.34
CCDC57-214ENST00000582040 PRPF38AQ8NAV1 312 aaKnown RBP17.15■□□□□ 0.34
CCDC57-214ENST00000582040 KIFC2Q96AC6 838 aa17.15■□□□□ 0.34
CCDC57-214ENST00000582040 PDLIM7Q9NR12 457 aa17.15■□□□□ 0.34
CCDC57-214ENST00000582040 MTMR4Q9NYA4 1195 aa17.15■□□□□ 0.34
CCDC57-214ENST00000582040 CNPY2Q9Y2B0 182 aa17.15■□□□□ 0.34
CCDC57-214ENST00000582040 RIPK3Q9Y572 518 aa17.15■□□□□ 0.34
CCDC57-214ENST00000582040 CTDP1Q9Y5B0 961 aaPredicted RBP17.15■□□□□ 0.34
CCDC57-214ENST00000582040 SMCHD1A6NHR9 2005 aa17.14■□□□□ 0.34
CCDC57-214ENST00000582040 PATL2C9JE40 543 aaKnown RBP17.14■□□□□ 0.33
CCDC57-214ENST00000582040 ZNF865P0CJ78 1059 aaPredicted RBP17.14■□□□□ 0.33
CCDC57-214ENST00000582040 AKR1A1P14550 325 aa17.14■□□□□ 0.33
CCDC57-214ENST00000582040 SLC17A8Q8NDX2 589 aa17.14■□□□□ 0.33
CCDC57-214ENST00000582040 DDX11Q96FC9 970 aa17.14■□□□□ 0.33
CCDC57-214ENST00000582040 NACAP1Q9BZK3 213 aa17.14■□□□□ 0.33
CCDC57-214ENST00000582040 NAPBQ9H115 298 aa17.14■□□□□ 0.33
CCDC57-214ENST00000582040 PHF24Q9UPV7 400 aa17.14■□□□□ 0.33
CCDC57-214ENST00000582040 ATP2A1O14983 1001 aa17.13■□□□□ 0.33
CCDC57-214ENST00000582040 ZBED4O75132 1171 aa17.13■□□□□ 0.33
CCDC57-214ENST00000582040 TTLL1O95922 423 aa17.13■□□□□ 0.33
CCDC57-214ENST00000582040 TSPY3P0CV98 308 aa17.13■□□□□ 0.33
CCDC57-214ENST00000582040 TSPY8P0CW00 308 aa17.13■□□□□ 0.33
CCDC57-214ENST00000582040 MX1P20591 662 aa17.13■□□□□ 0.33
CCDC57-214ENST00000582040 PDE4BQ07343 736 aa17.13■□□□□ 0.33
CCDC57-214ENST00000582040 ZMYM1Q5SVZ6 1142 aa17.13■□□□□ 0.33
CCDC57-214ENST00000582040 RNF180Q86T96 592 aa17.13■□□□□ 0.33
CCDC57-214ENST00000582040 MKL1Q969V6 931 aa17.13■□□□□ 0.33
CCDC57-214ENST00000582040 RAVER2Q9HCJ3 691 aaKnown RBP17.13■□□□□ 0.33
CCDC57-214ENST00000582040 MTMR10Q9NXD2 777 aa17.13■□□□□ 0.33
CCDC57-214ENST00000582040 SYNPO2Q9UMS6 1093 aa17.13■□□□□ 0.33
CCDC57-214ENST00000582040 COL6A3P12111 3177 aa17.13■□□□□ 0.33
CCDC57-214ENST00000582040 DNAJC25-GNG10A0A024R161 153 aa17.12■□□□□ 0.33
CCDC57-214ENST00000582040 PPARAQ07869 468 aa17.12■□□□□ 0.33
CCDC57-214ENST00000582040 SH3RF1Q7Z6J0 888 aa17.12■□□□□ 0.33
CCDC57-214ENST00000582040 GMCL1P1Q8NEA9 526 aa17.12■□□□□ 0.33
CCDC57-214ENST00000582040 NEDD1Q8NHV4 660 aa17.12■□□□□ 0.33
CCDC57-214ENST00000582040 SLC38A10Q9HBR0 1119 aa17.12■□□□□ 0.33
CCDC57-214ENST00000582040 FEM1BQ9UK73 627 aa17.12■□□□□ 0.33
CCDC57-214ENST00000582040 ZHX1Q9UKY1 873 aaPredicted RBP17.12■□□□□ 0.33
CCDC57-214ENST00000582040 ISY1Q9ULR0 285 aaKnown RBP17.12■□□□□ 0.33
CCDC57-214ENST00000582040 SYNGAP1Q96PV0 1343 aa17.12■□□□□ 0.33
CCDC57-214ENST00000582040 A0A1W2PQ45 241 aaPredicted RBP17.11■□□□□ 0.33
CCDC57-214ENST00000582040 A0A1W2PQY0 241 aa17.11■□□□□ 0.33
CCDC57-214ENST00000582040 ADAMTS4O75173 837 aa17.11■□□□□ 0.33
CCDC57-214ENST00000582040 SLC3A2P08195 630 aaKnown RBP17.11■□□□□ 0.33
CCDC57-214ENST00000582040 TLE2Q04725 743 aa17.11■□□□□ 0.33
CCDC57-214ENST00000582040 C1orf53Q5VUE5 145 aa17.11■□□□□ 0.33
CCDC57-214ENST00000582040 SLFN13Q68D06 897 aa17.11■□□□□ 0.33
CCDC57-214ENST00000582040 CCDC129Q6ZRS4 1044 aa17.11■□□□□ 0.33
CCDC57-214ENST00000582040 MSL3Q8N5Y2 521 aaKnown RBP17.11■□□□□ 0.33
CCDC57-214ENST00000582040 BADQ92934 168 aa17.11■□□□□ 0.33
CCDC57-214ENST00000582040 STXBP5LQ9Y2K9 1186 aa17.11■□□□□ 0.33
CCDC57-214ENST00000582040 SALL3Q9BXA9 1300 aa17.11■□□□□ 0.33
CCDC57-214ENST00000582040 SYNRGQ9UMZ2 1314 aa17.11■□□□□ 0.33
CCDC57-214ENST00000582040 TRIM43BA6NCK2 446 aa17.1■□□□□ 0.33
CCDC57-214ENST00000582040 FOXP2O15409 715 aa17.1■□□□□ 0.33
CCDC57-214ENST00000582040 SNAI1O95863 264 aaPredicted RBP17.1■□□□□ 0.33
CCDC57-214ENST00000582040 BMP3P12645 472 aa17.1■□□□□ 0.33
CCDC57-214ENST00000582040 RRP1P56182 461 aaKnown RBP17.1■□□□□ 0.33
CCDC57-214ENST00000582040 TFAP4Q01664 338 aa17.1■□□□□ 0.33
CCDC57-214ENST00000582040 C9orf50Q5SZB4 431 aa17.1■□□□□ 0.33
CCDC57-214ENST00000582040 MAMDC4Q6UXC1 1216 aa17.1■□□□□ 0.33
CCDC57-214ENST00000582040 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.1■□□□□ 0.333e-7■■■■■ 34.1
CCDC57-214ENST00000582040 ANKRD35Q8N283 1001 aa17.1■□□□□ 0.33
CCDC57-214ENST00000582040 TRIM43Q96BQ3 446 aaPredicted RBP17.1■□□□□ 0.33
CCDC57-214ENST00000582040 FGD4Q96M96 766 aa17.1■□□□□ 0.33
CCDC57-214ENST00000582040 FBXO40Q9UH90 709 aa17.1■□□□□ 0.33
CCDC57-214ENST00000582040 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.1■□□□□ 0.332e-6■■■■□ 19.5
CCDC57-214ENST00000582040 MCM3APO60318 1980 aa17.09■□□□□ 0.33
CCDC57-214ENST00000582040 TMEM232C9JQI7 657 aa17.09■□□□□ 0.33
CCDC57-214ENST00000582040 OAZ1P54368 228 aa17.09■□□□□ 0.33
CCDC57-214ENST00000582040 SHHQ15465 462 aa17.09■□□□□ 0.33
CCDC57-214ENST00000582040 ZNF467Q7Z7K2 595 aaPredicted RBP17.09■□□□□ 0.33
CCDC57-214ENST00000582040 CHST13Q8NET6 341 aa17.09■□□□□ 0.33
CCDC57-214ENST00000582040 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
CCDC57-214ENST00000582040 HOMER2Q9NSB8 354 aa17.09■□□□□ 0.33
CCDC57-214ENST00000582040 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.09■□□□□ 0.33
CCDC57-214ENST00000582040 FAM184BQ9ULE4 1060 aa17.09■□□□□ 0.33
CCDC57-214ENST00000582040 PQBP1O60828 265 aaKnown RBP17.08■□□□□ 0.32
CCDC57-214ENST00000582040 CLTBP09497 229 aa17.08■□□□□ 0.32
CCDC57-214ENST00000582040 STAT2P52630 851 aa17.08■□□□□ 0.32
CCDC57-214ENST00000582040 CTDSPL2Q05D32 466 aa17.08■□□□□ 0.32
CCDC57-214ENST00000582040 IKQ13123 557 aaPredicted RBP17.08■□□□□ 0.32
CCDC57-214ENST00000582040 GMCL1Q96IK5 515 aa17.08■□□□□ 0.32
CCDC57-214ENST00000582040 FAM161BQ96MY7 647 aa17.08■□□□□ 0.32
CCDC57-214ENST00000582040 STX8Q9UNK0 236 aa17.08■□□□□ 0.32
CCDC57-214ENST00000582040 LRRC37A2A6NM11 1700 aa17.07■□□□□ 0.32
CCDC57-214ENST00000582040 MYADML2A6NDP7 307 aa17.07■□□□□ 0.32
CCDC57-214ENST00000582040 TSPY2A6NKD2 308 aa17.07■□□□□ 0.32
CCDC57-214ENST00000582040 POTEB2H3BUK9 544 aa17.07■□□□□ 0.32
CCDC57-214ENST00000582040 ADCY6O43306 1168 aa17.07■□□□□ 0.32
CCDC57-214ENST00000582040 FDX1P10109 184 aa17.07■□□□□ 0.32
CCDC57-214ENST00000582040 ITGB8P26012 769 aa17.07■□□□□ 0.32
CCDC57-214ENST00000582040 SLC1A4P43007 532 aa17.07■□□□□ 0.32
CCDC57-214ENST00000582040 ACLYP53396 1101 aa17.07■□□□□ 0.32
CCDC57-214ENST00000582040 ACVR2BQ13705 512 aa17.07■□□□□ 0.32
CCDC57-214ENST00000582040 FAM109BQ6ICB4 259 aaPredicted RBP17.07■□□□□ 0.32
CCDC57-214ENST00000582040 ARMCX2Q7L311 632 aa17.07■□□□□ 0.32
CCDC57-214ENST00000582040 RASGRP2Q7LDG7 609 aa17.07■□□□□ 0.32
CCDC57-214ENST00000582040 FAM160B2Q86V87 743 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms