RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 CEP95Q96GE4 821 aa16.15■□□□□ 0.18
PGAP3-207ENST00000580898 LRCH3Q96II8 777 aa16.15■□□□□ 0.18
PGAP3-207ENST00000580898 NUP88Q99567 741 aaPredicted RBP16.15■□□□□ 0.18
PGAP3-207ENST00000580898 XPNPEP3Q9NQH7 507 aa16.15■□□□□ 0.18
PGAP3-207ENST00000580898 ISY1Q9ULR0 285 aaKnown RBP16.15■□□□□ 0.18
PGAP3-207ENST00000580898 ATP11BQ9Y2G3 1177 aa16.15■□□□□ 0.18
PGAP3-207ENST00000580898 OAZ1P54368 228 aa16.14■□□□□ 0.17
PGAP3-207ENST00000580898 LRRC41Q15345 812 aa16.14■□□□□ 0.17
PGAP3-207ENST00000580898 FAM47AQ5JRC9 791 aa16.14■□□□□ 0.17
PGAP3-207ENST00000580898 SLC39A5Q6ZMH5 540 aa16.14■□□□□ 0.17
PGAP3-207ENST00000580898 CPXCR1Q8N123 301 aa16.14■□□□□ 0.17
PGAP3-207ENST00000580898 NEDD1Q8NHV4 660 aa16.14■□□□□ 0.17
PGAP3-207ENST00000580898 SYNGAP1Q96PV0 1343 aa16.14■□□□□ 0.17
PGAP3-207ENST00000580898 COL11A1P12107 1806 aaPredicted RBP16.13■□□□□ 0.17
PGAP3-207ENST00000580898 BMP3P12645 472 aa16.13■□□□□ 0.17
PGAP3-207ENST00000580898 SLC4A3P48751 1232 aa16.13■□□□□ 0.17
PGAP3-207ENST00000580898 STAT2P52630 851 aa16.13■□□□□ 0.17
PGAP3-207ENST00000580898 AAMPQ13685 434 aa16.13■□□□□ 0.17
PGAP3-207ENST00000580898 ANKRD45Q5TZF3 282 aa16.13■□□□□ 0.17
PGAP3-207ENST00000580898 SLFN13Q68D06 897 aa16.13■□□□□ 0.17
PGAP3-207ENST00000580898 FAM160B2Q86V87 743 aa16.13■□□□□ 0.17
PGAP3-207ENST00000580898 LRRC47Q8N1G4 583 aaKnown RBP16.13■□□□□ 0.17
PGAP3-207ENST00000580898 CHST13Q8NET6 341 aa16.13■□□□□ 0.17
PGAP3-207ENST00000580898 CHURC1Q8WUH1 139 aa16.13■□□□□ 0.17
PGAP3-207ENST00000580898 EVI5LQ96CN4 794 aa16.13■□□□□ 0.17
PGAP3-207ENST00000580898 SEC62Q99442 399 aaKnown RBP16.13■□□□□ 0.17
PGAP3-207ENST00000580898 TSPY2A6NKD2 308 aa16.12■□□□□ 0.17
PGAP3-207ENST00000580898 ADCYAP1R1P41586 468 aa16.12■□□□□ 0.17
PGAP3-207ENST00000580898 TFAP4Q01664 338 aa16.12■□□□□ 0.17
PGAP3-207ENST00000580898 IKQ13123 557 aaPredicted RBP16.12■□□□□ 0.17
PGAP3-207ENST00000580898 C1orf53Q5VUE5 145 aa16.12■□□□□ 0.17
PGAP3-207ENST00000580898 ZNF467Q7Z7K2 595 aaPredicted RBP16.12■□□□□ 0.17
PGAP3-207ENST00000580898 TICAM2Q86XR7 235 aa16.12■□□□□ 0.17
PGAP3-207ENST00000580898 ANKRD35Q8N283 1001 aa16.12■□□□□ 0.17
PGAP3-207ENST00000580898 SLC38A10Q9HBR0 1119 aa16.12■□□□□ 0.17
PGAP3-207ENST00000580898 PRDM5Q9NQX1 630 aaPredicted RBP16.12■□□□□ 0.17
PGAP3-207ENST00000580898 FAM184BQ9ULE4 1060 aa16.12■□□□□ 0.17
PGAP3-207ENST00000580898 SLC1A4P43007 532 aa16.11■□□□□ 0.17
PGAP3-207ENST00000580898 SNX17Q15036 470 aa16.11■□□□□ 0.17
PGAP3-207ENST00000580898 MAMDC4Q6UXC1 1216 aa16.11■□□□□ 0.17
PGAP3-207ENST00000580898 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.11■□□□□ 0.17
PGAP3-207ENST00000580898 OTUD7AQ8TE49 926 aaPredicted RBP16.11■□□□□ 0.17
PGAP3-207ENST00000580898 RAVER2Q9HCJ3 691 aaKnown RBP16.11■□□□□ 0.17
PGAP3-207ENST00000580898 PHF24Q9UPV7 400 aa16.11■□□□□ 0.17
PGAP3-207ENST00000580898 RANBP2P49792 3224 aaKnown RBP16.1■□□□□ 0.17
PGAP3-207ENST00000580898 TMEM232C9JQI7 657 aa16.1■□□□□ 0.17
PGAP3-207ENST00000580898 ZNF865P0CJ78 1059 aaPredicted RBP16.1■□□□□ 0.17
PGAP3-207ENST00000580898 HDAC1Q13547 482 aaPredicted RBP16.1■□□□□ 0.17
PGAP3-207ENST00000580898 TRIM60Q495X7 471 aa16.1■□□□□ 0.17
PGAP3-207ENST00000580898 DEFB123Q8N688 67 aa16.1■□□□□ 0.17
PGAP3-207ENST00000580898 NUP133Q8WUM0 1156 aa16.1■□□□□ 0.17
PGAP3-207ENST00000580898 FERMT2Q96AC1 680 aa16.1■□□□□ 0.17
PGAP3-207ENST00000580898 GMCL1Q96IK5 515 aa16.1■□□□□ 0.17
PGAP3-207ENST00000580898 CRBNQ96SW2 442 aa16.1■□□□□ 0.17
PGAP3-207ENST00000580898 TSEN34Q9BSV6 310 aaKnown RBP16.1■□□□□ 0.17
PGAP3-207ENST00000580898 SPC25Q9HBM1 224 aa16.1■□□□□ 0.17
PGAP3-207ENST00000580898 HELLSQ9NRZ9 838 aa16.1■□□□□ 0.17
PGAP3-207ENST00000580898 ZHX1Q9UKY1 873 aaPredicted RBP16.1■□□□□ 0.17
PGAP3-207ENST00000580898 STX8Q9UNK0 236 aa16.1■□□□□ 0.17
PGAP3-207ENST00000580898 RIPK3Q9Y572 518 aa16.1■□□□□ 0.17
PGAP3-207ENST00000580898 DNAJC25-GNG10A0A024R161 153 aa16.09■□□□□ 0.17
PGAP3-207ENST00000580898 PGK1P00558 417 aa16.09■□□□□ 0.17
PGAP3-207ENST00000580898 TKFCQ3LXA3 575 aa16.09■□□□□ 0.17
PGAP3-207ENST00000580898 STAG1Q8WVM7 1258 aa16.09■□□□□ 0.17
PGAP3-207ENST00000580898 ABHD16BQ9H3Z7 469 aa16.09■□□□□ 0.17
PGAP3-207ENST00000580898 ACAD9Q9H845 621 aa16.09■□□□□ 0.17
PGAP3-207ENST00000580898 TACC3Q9Y6A5 838 aa16.09■□□□□ 0.17
PGAP3-207ENST00000580898 SALL3Q9BXA9 1300 aa16.09■□□□□ 0.17
PGAP3-207ENST00000580898 MYH4Q9Y623 1939 aa16.09■□□□□ 0.17
PGAP3-207ENST00000580898 MOXD2PA6NHM9 499 aa16.08■□□□□ 0.16
PGAP3-207ENST00000580898 RANBP6O60518 1105 aaKnown RBP16.08■□□□□ 0.16
PGAP3-207ENST00000580898 PLA2G6O60733 806 aa16.08■□□□□ 0.16
PGAP3-207ENST00000580898 TAL1P17542 331 aaPredicted RBP16.08■□□□□ 0.16
PGAP3-207ENST00000580898 PDE1AP54750 535 aa16.08■□□□□ 0.16
PGAP3-207ENST00000580898 CCDC129Q6ZRS4 1044 aa16.08■□□□□ 0.16
PGAP3-207ENST00000580898 PDLIM7Q9NR12 457 aa16.08■□□□□ 0.16
PGAP3-207ENST00000580898 TOMM22Q9NS69 142 aa16.08■□□□□ 0.16
PGAP3-207ENST00000580898 ANAPC4Q9UJX5 808 aa16.08■□□□□ 0.16
PGAP3-207ENST00000580898 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.08■□□□□ 0.16
PGAP3-207ENST00000580898 PLXNA1Q9UIW2 1896 aa16.08■□□□□ 0.16
PGAP3-207ENST00000580898 A0A1W2PQ45 241 aaPredicted RBP16.07■□□□□ 0.16
PGAP3-207ENST00000580898 A0A1W2PQY0 241 aa16.07■□□□□ 0.16
PGAP3-207ENST00000580898 DUSP11O75319 330 aaKnown RBP16.07■□□□□ 0.16
PGAP3-207ENST00000580898 MFAP1P55081 439 aaKnown RBP16.07■□□□□ 0.16
PGAP3-207ENST00000580898 ACVR2BQ13705 512 aa16.07■□□□□ 0.16
PGAP3-207ENST00000580898 HOMER2Q9NSB8 354 aa16.07■□□□□ 0.16
PGAP3-207ENST00000580898 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.07■□□□□ 0.16
PGAP3-207ENST00000580898 ZNFX1Q9P2E3 1918 aaKnown RBP16.06■□□□□ 0.16
PGAP3-207ENST00000580898 MROH7Q68CQ1 1323 aa16.06■□□□□ 0.16
PGAP3-207ENST00000580898 SYNRGQ9UMZ2 1314 aa16.06■□□□□ 0.16
PGAP3-207ENST00000580898 POTEB2H3BUK9 544 aa16.06■□□□□ 0.16
PGAP3-207ENST00000580898 ORC4O43929 436 aa16.06■□□□□ 0.16
PGAP3-207ENST00000580898 ADAMTS4O75173 837 aa16.06■□□□□ 0.16
PGAP3-207ENST00000580898 SNAI1O95863 264 aaPredicted RBP16.06■□□□□ 0.16
PGAP3-207ENST00000580898 CLTBP09497 229 aa16.06■□□□□ 0.16
PGAP3-207ENST00000580898 MCCP23508 829 aa16.06■□□□□ 0.16
PGAP3-207ENST00000580898 CTDSPL2Q05D32 466 aa16.06■□□□□ 0.16
PGAP3-207ENST00000580898 ALX1Q15699 326 aa16.06■□□□□ 0.16
PGAP3-207ENST00000580898 MCMDC2Q4G0Z9 681 aa16.06■□□□□ 0.16
PGAP3-207ENST00000580898 RCSD1Q6JBY9 416 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms