RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 TMEM199Q8N511 208 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 TGFBRAP1Q8WUH2 860 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 VWCEQ96DN2 955 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 XAGE2Q96GT9 111 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 FBXL18Q96ME1 805 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 FEZ1Q99689 392 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 KCNH6Q9H252 994 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 IL23AQ9NPF7 189 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 AATFQ9NY61 560 aaKnown RBP eCLIP9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 NRBP1Q9UHY1 535 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 COG5Q9UP83 839 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 SYNRGQ9UMZ2 1314 aa9.49□□□□□ -0.89
SMARCE1-217ENST00000580654 ZDBF2Q9HCK1 2354 aa9.48□□□□□ -0.89
SMARCE1-217ENST00000580654 CYP2C18P33260 490 aa9.48□□□□□ -0.89
SMARCE1-217ENST00000580654 GUCY1A2P33402 732 aa9.48□□□□□ -0.89
SMARCE1-217ENST00000580654 IL15P40933 162 aaPredicted RBP9.48□□□□□ -0.89
SMARCE1-217ENST00000580654 USP14P54578 494 aa9.48□□□□□ -0.89
SMARCE1-217ENST00000580654 KCNA10Q16322 511 aa9.48□□□□□ -0.89
SMARCE1-217ENST00000580654 CCDC184Q52MB2 194 aa9.48□□□□□ -0.89
SMARCE1-217ENST00000580654 TATDN1Q6P1N9 297 aa9.48□□□□□ -0.89
SMARCE1-217ENST00000580654 FAM126BQ8IXS8 530 aa9.48□□□□□ -0.89
SMARCE1-217ENST00000580654 ABRAQ8N0Z2 381 aa9.48□□□□□ -0.89
SMARCE1-217ENST00000580654 SAP30BPQ9UHR5 308 aaKnown RBP9.48□□□□□ -0.89
SMARCE1-217ENST00000580654 UMODL1Q5DID0 1318 aa9.48□□□□□ -0.89
SMARCE1-217ENST00000580654 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 A0A1B0GUL7 405 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 C2orf72A6NCS6 295 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 MOXD2PA6NHM9 499 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 ARHGEF15O94989 841 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 FGBP02675 491 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 AKR1A1P14550 325 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 PPP4CP60510 307 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 OTOP2Q7RTS6 562 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 WDR63Q8IWG1 891 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 SPATA5Q8NB90 893 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 NUP133Q8WUM0 1156 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 ANKS1AQ92625 1134 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 CDCA7LQ96GN5 454 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 ZFP91Q96JP5 570 aaPredicted RBP9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 PHOX2BQ99453 314 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 TINF2Q9BSI4 451 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 MROH8Q9H579 483 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 CERS4Q9HA82 394 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 SLC5A4Q9NY91 659 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 RAI14Q9P0K7 980 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 PCDHA11Q9Y5I1 949 aa9.47□□□□□ -0.89
SMARCE1-217ENST00000580654 A0A1W2PRG0 241 aa9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 APBB1O00213 710 aa9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 RIOK3O14730 519 aaKnown RBP9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 ADCY6O43306 1168 aa9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 CD4P01730 458 aa9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 PGK2P07205 417 aa9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 COG2Q14746 738 aa9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 RAB3GAP1Q15042 981 aa9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 ZNF792Q3KQV3 632 aa9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 KIAA1755Q5JYT7 1200 aa9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 NCAPG2Q86XI2 1143 aa9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 MRPL50Q8N5N7 158 aaKnown RBP9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 HLA-CQ95604 372 aa9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 KCTD12Q96CX2 325 aaKnown RBP9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 TRIM34Q9BYJ4 488 aa9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 COPRSQ9NQ92 184 aa9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 ELP1O95163 1332 aa9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 MROH7Q68CQ1 1323 aa9.46□□□□□ -0.9
SMARCE1-217ENST00000580654 ZNF318Q5VUA4 2279 aa9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 C5orf42Q9H799 3197 aa9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 PTPRSQ13332 1948 aa9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 SCN5AQ14524 2016 aa9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 ARVCFO00192 962 aa9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 GTPBP6O43824 516 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 ASGR1P07306 291 aa9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 CA3P07451 260 aa9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 CST5P28325 142 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 ARID4AP29374 1257 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 MCAMP43121 646 aa9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 MVPQ14764 893 aaKnown RBP9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 GLT1D1Q96MS3 346 aa9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 MTIF3Q9H2K0 278 aaKnown RBP9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 HOXC10Q9NYD6 342 aa9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 SALL2Q9Y467 1007 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-217ENST00000580654 MCM3APO60318 1980 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 SPTBN4Q9H254 2564 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 A0A0U1RQG5 324 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 LPXNO60711 386 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 BAG3O95817 575 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 SNAI1O95863 264 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 HLA-DOAP06340 250 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 FCER1AP12319 257 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 SHMT1P34896 483 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 DYNLL1P63167 89 aaKnown RBP9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 TFCP2Q12800 502 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 PLS1Q14651 629 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 TMEM132BQ14DG7 1078 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 ABCB5Q2M3G0 1257 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 NAA16Q6N069 864 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 SPRED2Q7Z698 418 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 FAM178BQ8IXR5 827 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 FBXO22Q8NEZ5 403 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 ATG4CQ96DT6 458 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 UIMC1Q96RL1 719 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms