RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 RPTORQ8N122 1335 aa14.22□□□□□ -0.13
CCDC84-209ENST00000580556 ERICH2A1L162 156 aa14.22□□□□□ -0.13
CCDC84-209ENST00000580556 SH2B2O14492 632 aaPredicted RBP14.22□□□□□ -0.13
CCDC84-209ENST00000580556 NMT2O60551 498 aa14.22□□□□□ -0.13
CCDC84-209ENST00000580556 HMGCRP04035 888 aa14.22□□□□□ -0.13
CCDC84-209ENST00000580556 TOP1P11387 765 aaKnown RBP14.22□□□□□ -0.13
CCDC84-209ENST00000580556 EEF2P13639 858 aaKnown RBP14.22□□□□□ -0.13
CCDC84-209ENST00000580556 MDM2Q00987 491 aaPredicted RBP14.22□□□□□ -0.13
CCDC84-209ENST00000580556 COL9A3Q14050 684 aaPredicted RBP14.22□□□□□ -0.13
CCDC84-209ENST00000580556 RABEP1Q15276 862 aa14.22□□□□□ -0.13
CCDC84-209ENST00000580556 SGMS1Q86VZ5 419 aa14.22□□□□□ -0.13
CCDC84-209ENST00000580556 SIAH1Q8IUQ4 282 aa14.22□□□□□ -0.13
CCDC84-209ENST00000580556 TMTC2Q8N394 836 aa14.22□□□□□ -0.13
CCDC84-209ENST00000580556 IGDCC4Q8TDY8 1250 aa14.22□□□□□ -0.13
CCDC84-209ENST00000580556 GJD2Q9UKL4 321 aa14.22□□□□□ -0.13
CCDC84-209ENST00000580556 STX8Q9UNK0 236 aa14.22□□□□□ -0.13
CCDC84-209ENST00000580556 SLC45A1Q9Y2W3 748 aa14.22□□□□□ -0.13
CCDC84-209ENST00000580556 PLXNB2O15031 1838 aa14.22□□□□□ -0.13
CCDC84-209ENST00000580556 SPTBN5Q9NRC6 3674 aaKnown RBP14.21□□□□□ -0.13
CCDC84-209ENST00000580556 C19orf81C9J6K1 198 aa14.21□□□□□ -0.13
CCDC84-209ENST00000580556 IFIT3O14879 490 aaKnown RBP14.21□□□□□ -0.13
CCDC84-209ENST00000580556 USP14P54578 494 aa14.21□□□□□ -0.13
CCDC84-209ENST00000580556 BACE1P56817 501 aa14.21□□□□□ -0.13
CCDC84-209ENST00000580556 WTAPQ15007 396 aa14.21□□□□□ -0.13
CCDC84-209ENST00000580556 TMEM67Q5HYA8 995 aa14.21□□□□□ -0.13
CCDC84-209ENST00000580556 SH3D19Q5HYK7 790 aa14.21□□□□□ -0.13
CCDC84-209ENST00000580556 IFIT1BQ5T764 474 aaKnown RBP14.21□□□□□ -0.13
CCDC84-209ENST00000580556 GMCL1P1Q8NEA9 526 aa14.21□□□□□ -0.13
CCDC84-209ENST00000580556 C12orf42Q96LP6 360 aa14.21□□□□□ -0.13
CCDC84-209ENST00000580556 ZKSCAN3Q9BRR0 538 aa14.21□□□□□ -0.13
CCDC84-209ENST00000580556 UPF3BQ9BZI7 483 aaKnown RBP14.21□□□□□ -0.13
CCDC84-209ENST00000580556 LY9Q9HBG7 655 aa14.21□□□□□ -0.13
CCDC84-209ENST00000580556 HMX1Q9NP08 348 aaPredicted RBP14.21□□□□□ -0.13
CCDC84-209ENST00000580556 OGDHLQ9ULD0 1010 aa14.21□□□□□ -0.13
CCDC84-209ENST00000580556 LAMA2P24043 3122 aaKnown RBP14.2□□□□□ -0.14
CCDC84-209ENST00000580556 A0A1W2PRG0 241 aa14.2□□□□□ -0.14
CCDC84-209ENST00000580556 USP17L10C9JJH3 530 aa14.2□□□□□ -0.14
CCDC84-209ENST00000580556 POTEB2H3BUK9 544 aa14.2□□□□□ -0.14
CCDC84-209ENST00000580556 PEX10O60683 326 aa14.2□□□□□ -0.14
CCDC84-209ENST00000580556 SPP2Q13103 211 aa14.2□□□□□ -0.14
CCDC84-209ENST00000580556 FAM110CQ1W6H9 321 aa14.2□□□□□ -0.14
CCDC84-209ENST00000580556 CHST3Q7LGC8 479 aa14.2□□□□□ -0.14
CCDC84-209ENST00000580556 CLEC10AQ8IUN9 316 aa14.2□□□□□ -0.14
CCDC84-209ENST00000580556 ACER1Q8TDN7 264 aa14.2□□□□□ -0.14
CCDC84-209ENST00000580556 TRIB2Q92519 343 aa14.2□□□□□ -0.14
CCDC84-209ENST00000580556 LPAR1Q92633 364 aa14.2□□□□□ -0.14
CCDC84-209ENST00000580556 FEZ1Q99689 392 aa14.2□□□□□ -0.14
CCDC84-209ENST00000580556 TMEM47Q9BQJ4 181 aa14.2□□□□□ -0.14
CCDC84-209ENST00000580556 CLIP2Q9UDT6 1046 aa14.2□□□□□ -0.14
CCDC84-209ENST00000580556 AGTPBP1Q9UPW5 1226 aa14.2□□□□□ -0.14
CCDC84-209ENST00000580556 LOC285556D6RIA3 1793 aa14.19□□□□□ -0.14
CCDC84-209ENST00000580556 CPA1P15085 419 aa14.19□□□□□ -0.14
CCDC84-209ENST00000580556 RCAN1P53805 252 aa14.19□□□□□ -0.14
CCDC84-209ENST00000580556 EVCP57679 992 aa14.19□□□□□ -0.14
CCDC84-209ENST00000580556 MTMR2Q13614 643 aa14.19□□□□□ -0.14
CCDC84-209ENST00000580556 ANKRD1Q15327 319 aa14.19□□□□□ -0.14
CCDC84-209ENST00000580556 LRRC26Q2I0M4 334 aa14.19□□□□□ -0.14
CCDC84-209ENST00000580556 PROCA1Q8NCQ7 364 aaPredicted RBP14.19□□□□□ -0.14
CCDC84-209ENST00000580556 VCPKMTQ9H867 229 aa14.19□□□□□ -0.14
CCDC84-209ENST00000580556 KAT14Q9H8E8 782 aa14.19□□□□□ -0.14
CCDC84-209ENST00000580556 GOPCQ9HD26 462 aa14.19□□□□□ -0.14
CCDC84-209ENST00000580556 PDRG1Q9NUG6 133 aa14.19□□□□□ -0.14
CCDC84-209ENST00000580556 CYP2B6P20813 491 aa14.18□□□□□ -0.14
CCDC84-209ENST00000580556 NEK4P51957 841 aa14.18□□□□□ -0.14
CCDC84-209ENST00000580556 FGD1P98174 961 aa14.18□□□□□ -0.14
CCDC84-209ENST00000580556 ATP2B2Q01814 1243 aa14.18□□□□□ -0.14
CCDC84-209ENST00000580556 USP17L2Q6R6M4 530 aa14.18□□□□□ -0.14
CCDC84-209ENST00000580556 Q6ZUG5 572 aa14.18□□□□□ -0.14
CCDC84-209ENST00000580556 PNMA1Q8ND90 353 aa14.18□□□□□ -0.14
CCDC84-209ENST00000580556 TCEANC2Q96MN5 208 aa14.18□□□□□ -0.14
CCDC84-209ENST00000580556 MAP3K14Q99558 947 aa14.18□□□□□ -0.14
CCDC84-209ENST00000580556 MYH4Q9Y623 1939 aa14.17□□□□□ -0.14
CCDC84-209ENST00000580556 CCDC69A6NI79 296 aa14.17□□□□□ -0.14
CCDC84-209ENST00000580556 F5H6K3 240 aa14.17□□□□□ -0.14
CCDC84-209ENST00000580556 DDAH1O94760 285 aa14.17□□□□□ -0.14
CCDC84-209ENST00000580556 SNHG28P0DPA3 235 aa14.17□□□□□ -0.14
CCDC84-209ENST00000580556 COL6A1P12109 1028 aa14.17□□□□□ -0.14
CCDC84-209ENST00000580556 PRKAR2AP13861 404 aaKnown RBP14.17□□□□□ -0.14
CCDC84-209ENST00000580556 KLRC3Q07444 240 aa14.17□□□□□ -0.14
CCDC84-209ENST00000580556 TROAPQ12815 778 aa14.17□□□□□ -0.14
CCDC84-209ENST00000580556 TOB2Q14106 344 aaPredicted RBP14.17□□□□□ -0.14
CCDC84-209ENST00000580556 CATIPQ7Z7H3 387 aa14.17□□□□□ -0.14
CCDC84-209ENST00000580556 LRRC47Q8N1G4 583 aaKnown RBP14.17□□□□□ -0.14
CCDC84-209ENST00000580556 DCAF4Q8WV16 495 aa14.17□□□□□ -0.14
CCDC84-209ENST00000580556 GMCL1Q96IK5 515 aa14.17□□□□□ -0.14
CCDC84-209ENST00000580556 LRRC2Q9BYS8 371 aa14.17□□□□□ -0.14
CCDC84-209ENST00000580556 NID2Q14112 1375 aa14.17□□□□□ -0.14
CCDC84-209ENST00000580556 PRUNE2Q8WUY3 3088 aa14.16□□□□□ -0.14
CCDC84-209ENST00000580556 WDR46O15213 610 aaKnown RBP14.16□□□□□ -0.14
CCDC84-209ENST00000580556 ST18O60284 1047 aa14.16□□□□□ -0.14
CCDC84-209ENST00000580556 NDUFB10O96000 172 aa14.16□□□□□ -0.14
CCDC84-209ENST00000580556 CALM1P0DP23 149 aa14.16□□□□□ -0.14
CCDC84-209ENST00000580556 CALM2P0DP24 149 aa14.16□□□□□ -0.14
CCDC84-209ENST00000580556 CALM3P0DP25 149 aa14.16□□□□□ -0.14
CCDC84-209ENST00000580556 HMGCS2P54868 508 aa14.16□□□□□ -0.14
CCDC84-209ENST00000580556 MAP3K21Q5TCX8 1036 aa14.16□□□□□ -0.14
CCDC84-209ENST00000580556 FAM109BQ6ICB4 259 aaPredicted RBP14.16□□□□□ -0.14
CCDC84-209ENST00000580556 APOA5Q6Q788 366 aa14.16□□□□□ -0.14
CCDC84-209ENST00000580556 NFXL1Q6ZNB6 911 aa14.16□□□□□ -0.14
CCDC84-209ENST00000580556 ZNF654Q8IZM8 581 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms