RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 LRP2BPQ9P2M1 347 aa17.32■□□□□ 0.36
CSNK1D-213ENST00000580446 ZNF536O15090 1300 aa17.31■□□□□ 0.36
CSNK1D-213ENST00000580446 IL16Q14005 1332 aa17.31■□□□□ 0.36
CSNK1D-213ENST00000580446 FLOT1O75955 427 aa17.31■□□□□ 0.36
CSNK1D-213ENST00000580446 DSG3P32926 999 aa17.31■□□□□ 0.36
CSNK1D-213ENST00000580446 CERKLQ49MI3 558 aaPredicted RBP17.31■□□□□ 0.36
CSNK1D-213ENST00000580446 TATDN1Q6P1N9 297 aa17.31■□□□□ 0.36
CSNK1D-213ENST00000580446 CXCL17Q6UXB2 119 aa17.31■□□□□ 0.36
CSNK1D-213ENST00000580446 CLEC10AQ8IUN9 316 aa17.31■□□□□ 0.36
CSNK1D-213ENST00000580446 SNRKQ9NRH2 765 aa17.31■□□□□ 0.36
CSNK1D-213ENST00000580446 B4GALT4O60513 344 aa17.3■□□□□ 0.36
CSNK1D-213ENST00000580446 KRT37O76014 449 aa17.3■□□□□ 0.36
CSNK1D-213ENST00000580446 RGS20O76081 388 aa17.3■□□□□ 0.36
CSNK1D-213ENST00000580446 IL15P40933 162 aaPredicted RBP17.3■□□□□ 0.36
CSNK1D-213ENST00000580446 PSMC6P62333 389 aa17.3■□□□□ 0.36
CSNK1D-213ENST00000580446 EVX2Q03828 476 aa17.3■□□□□ 0.36
CSNK1D-213ENST00000580446 TFCP2Q12800 502 aa17.3■□□□□ 0.36
CSNK1D-213ENST00000580446 KCTD2Q14681 263 aa17.3■□□□□ 0.36
CSNK1D-213ENST00000580446 NAA16Q6N069 864 aaPredicted RBP17.3■□□□□ 0.36
CSNK1D-213ENST00000580446 PCSK9Q8NBP7 692 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-213ENST00000580446 NEUROD6Q96NK8 337 aa17.3■□□□□ 0.36
CSNK1D-213ENST00000580446 GRIN2DO15399 1336 aa17.29■□□□□ 0.36
CSNK1D-213ENST00000580446 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.29■□□□□ 0.36
CSNK1D-213ENST00000580446 GRXCR2A6NFK2 248 aa17.29■□□□□ 0.36
CSNK1D-213ENST00000580446 CTAGE5O15320 804 aa17.29■□□□□ 0.36
CSNK1D-213ENST00000580446 DUSP11O75319 330 aaKnown RBP17.29■□□□□ 0.36
CSNK1D-213ENST00000580446 CST5P28325 142 aaPredicted RBP17.29■□□□□ 0.36
CSNK1D-213ENST00000580446 TCF15Q12870 199 aa17.29■□□□□ 0.36
CSNK1D-213ENST00000580446 DDX10Q13206 875 aaKnown RBP17.29■□□□□ 0.36
CSNK1D-213ENST00000580446 MFSD14AQ96MC6 490 aa17.29■□□□□ 0.36
CSNK1D-213ENST00000580446 MUTYHQ9UIF7 546 aa17.29■□□□□ 0.36
CSNK1D-213ENST00000580446 MPHOSPH10O00566 681 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-213ENST00000580446 BAG3O95817 575 aa17.28■□□□□ 0.36
CSNK1D-213ENST00000580446 CYP2C9P11712 490 aa17.28■□□□□ 0.36
CSNK1D-213ENST00000580446 SHMT1P34896 483 aa17.28■□□□□ 0.36
CSNK1D-213ENST00000580446 MCAMP43121 646 aa17.28■□□□□ 0.36
CSNK1D-213ENST00000580446 PTPN5P54829 565 aa17.28■□□□□ 0.36
CSNK1D-213ENST00000580446 MVPQ14764 893 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-213ENST00000580446 HERC6Q8IVU3 1022 aa17.28■□□□□ 0.36
CSNK1D-213ENST00000580446 RPUSD2Q8IZ73 545 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-213ENST00000580446 AGBL1Q96MI9 1066 aa17.28■□□□□ 0.36
CSNK1D-213ENST00000580446 TRIOO75962 3097 aa17.27■□□□□ 0.36
CSNK1D-213ENST00000580446 CACNA1GO43497 2377 aa17.27■□□□□ 0.36
CSNK1D-213ENST00000580446 CCDC144BQ3MJ40 725 aa17.27■□□□□ 0.36
CSNK1D-213ENST00000580446 EP400NLQ6ZTU2 488 aa17.27■□□□□ 0.36
CSNK1D-213ENST00000580446 PPP1R13LQ8WUF5 828 aa17.27■□□□□ 0.36
CSNK1D-213ENST00000580446 UPF3AQ9H1J1 476 aaKnown RBP17.27■□□□□ 0.36
CSNK1D-213ENST00000580446 CABP5Q9NP86 173 aa17.27■□□□□ 0.36
CSNK1D-213ENST00000580446 FBXO28Q9NVF7 368 aa17.27■□□□□ 0.36
CSNK1D-213ENST00000580446 C5orf42Q9H799 3197 aa17.26■□□□□ 0.35
CSNK1D-213ENST00000580446 SOWAHBA6NEL2 793 aa17.26■□□□□ 0.35
CSNK1D-213ENST00000580446 PLCG2P16885 1265 aa17.26■□□□□ 0.35
CSNK1D-213ENST00000580446 GJA9P57773 515 aa17.26■□□□□ 0.35
CSNK1D-213ENST00000580446 ZP2Q05996 745 aa17.26■□□□□ 0.35
CSNK1D-213ENST00000580446 ATF7IPQ6VMQ6 1270 aa17.26■□□□□ 0.35
CSNK1D-213ENST00000580446 MB21D1Q8N884 522 aa17.26■□□□□ 0.35
CSNK1D-213ENST00000580446 SERPINB13Q9UIV8 391 aa17.26■□□□□ 0.35
CSNK1D-213ENST00000580446 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.25■□□□□ 0.35
CSNK1D-213ENST00000580446 ZBTB22O15209 634 aa17.25■□□□□ 0.35
CSNK1D-213ENST00000580446 IRS1P35568 1242 aa17.25■□□□□ 0.35
CSNK1D-213ENST00000580446 SLC4A3P48751 1232 aa17.25■□□□□ 0.35
CSNK1D-213ENST00000580446 PPP4CP60510 307 aa17.25■□□□□ 0.35
CSNK1D-213ENST00000580446 ITGA7Q13683 1181 aa17.25■□□□□ 0.35
CSNK1D-213ENST00000580446 ACVR2BQ13705 512 aa17.25■□□□□ 0.35
CSNK1D-213ENST00000580446 GORABQ5T7V8 394 aa17.25■□□□□ 0.35
CSNK1D-213ENST00000580446 MIGA1Q8NAN2 632 aa17.25■□□□□ 0.35
CSNK1D-213ENST00000580446 SLC43A3Q8NBI5 491 aa17.25■□□□□ 0.35
CSNK1D-213ENST00000580446 SPC25Q9HBM1 224 aa17.25■□□□□ 0.35
CSNK1D-213ENST00000580446 ASTN1O14525 1302 aa17.24■□□□□ 0.35
CSNK1D-213ENST00000580446 CACNA1FO60840 1977 aa17.24■□□□□ 0.35
CSNK1D-213ENST00000580446 SLC25A27O95847 323 aa17.24■□□□□ 0.35
CSNK1D-213ENST00000580446 NOL8Q76FK4 1167 aaKnown RBP17.24■□□□□ 0.35
CSNK1D-213ENST00000580446 SLC9A7Q96T83 725 aa17.24■□□□□ 0.35
CSNK1D-213ENST00000580446 SUGCTQ9HAC7 445 aa17.24■□□□□ 0.35
CSNK1D-213ENST00000580446 TRMT13Q9NUP7 481 aaKnown RBP17.24■□□□□ 0.35
CSNK1D-213ENST00000580446 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.24■□□□□ 0.35
CSNK1D-213ENST00000580446 DIS3Q9Y2L1 958 aaKnown RBP17.24■□□□□ 0.35
CSNK1D-213ENST00000580446 USP5P45974 858 aa17.23■□□□□ 0.35
CSNK1D-213ENST00000580446 PLCD1P51178 756 aa17.23■□□□□ 0.35
CSNK1D-213ENST00000580446 RIOX2Q8IUF8 465 aa17.23■□□□□ 0.35
CSNK1D-213ENST00000580446 FBXO3Q9UK99 471 aa17.23■□□□□ 0.35
CSNK1D-213ENST00000580446 DDX49Q9Y6V7 483 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-213ENST00000580446 STAT3P40763 770 aa17.22■□□□□ 0.35
CSNK1D-213ENST00000580446 CCDC184Q52MB2 194 aa17.22■□□□□ 0.35
CSNK1D-213ENST00000580446 FTOQ9C0B1 505 aaKnown RBP eCLIP17.22■□□□□ 0.353e-10■■■■■ 39.9
CSNK1D-213ENST00000580446 EPG5Q9HCE0 2579 aa17.22■□□□□ 0.35
CSNK1D-213ENST00000580446 CDK5RAP2Q96SN8 1893 aa17.21■□□□□ 0.35
CSNK1D-213ENST00000580446 KIF28PB7ZC32 967 aa17.21■□□□□ 0.35
CSNK1D-213ENST00000580446 ARID4AP29374 1257 aaPredicted RBP17.21■□□□□ 0.35
CSNK1D-213ENST00000580446 CLUL1Q15846 466 aa17.21■□□□□ 0.35
CSNK1D-213ENST00000580446 TMEM63BQ5T3F8 832 aa17.21■□□□□ 0.35
CSNK1D-213ENST00000580446 MRPL50Q8N5N7 158 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-213ENST00000580446 PTPRZ1P23471 2315 aaPredicted RBP17.21■□□□□ 0.35
CSNK1D-213ENST00000580446 CACNA1BQ00975 2339 aa17.21■□□□□ 0.35
CSNK1D-213ENST00000580446 ACTN1P12814 892 aa17.2■□□□□ 0.34
CSNK1D-213ENST00000580446 ASCL5Q7RTU5 278 aa17.2■□□□□ 0.34
CSNK1D-213ENST00000580446 ATOH1Q92858 354 aaPredicted RBP17.2■□□□□ 0.34
CSNK1D-213ENST00000580446 PBXIP1Q96AQ6 731 aa17.2■□□□□ 0.34
CSNK1D-213ENST00000580446 DDX11Q96FC9 970 aa17.2■□□□□ 0.34
CSNK1D-213ENST00000580446 FGD4Q96M96 766 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms