RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 FMR1NBQ8N0W7 255 aaPredicted RBP17.01■□□□□ 0.31
CDK5RAP3-218ENST00000580391 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-218ENST00000580391 MRVI1Q9Y6F6 885 aa17.01■□□□□ 0.31
CDK5RAP3-218ENST00000580391 TRIM75PA6NK02 468 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 M0R2N6 131 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 SLC16A2P36021 539 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 GPATCH4Q5T3I0 446 aaKnown RBP17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 SLFN13Q68D06 897 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 SHC4Q6S5L8 630 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 RBM43Q6ZSC3 357 aaKnown RBP17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 DAGLBQ8NCG7 672 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 RNF214Q8ND24 703 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 FRMD4AQ9P2Q2 1039 aaPredicted RBP17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 NOL7Q9UMY1 257 aaKnown RBP17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 PFKFB1P16118 471 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 MMP14P50281 582 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 GRIN1Q05586 938 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 RASA3Q14644 834 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 KIF4BQ2VIQ3 1234 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 ADGRF4Q8IZF3 695 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 DCAF4Q8WV16 495 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 JMJD4Q9H9V9 463 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 FBXO2Q9UK22 296 aaPredicted RBP17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 ZBTB21Q9ULJ3 1066 aa17■□□□□ 0.31
CDK5RAP3-218ENST00000580391 A0A1W2PRG0 241 aa16.99■□□□□ 0.31
CDK5RAP3-218ENST00000580391 KINO60870 393 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-218ENST00000580391 CUTAO60888 179 aa16.99■□□□□ 0.31
CDK5RAP3-218ENST00000580391 CMA1P23946 247 aa16.99■□□□□ 0.31
CDK5RAP3-218ENST00000580391 SLC1A4P43007 532 aa16.99■□□□□ 0.31
CDK5RAP3-218ENST00000580391 TNNI2P48788 182 aa16.99■□□□□ 0.31
CDK5RAP3-218ENST00000580391 TTC38Q5R3I4 469 aa16.99■□□□□ 0.31
CDK5RAP3-218ENST00000580391 KRI1Q8N9T8 703 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-218ENST00000580391 TBC1D12O60347 775 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 NDUFB10O96000 172 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 LMNB1P20700 586 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 GMCL1P1Q8NEA9 526 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 CCDC12Q8WUD4 166 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 TEPSINQ96N21 525 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 NUP88Q99567 741 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 ZMYND12Q9H0C1 365 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 HACL1Q9UJ83 578 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 PCDHA6Q9UN73 950 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 CEP131Q9UPN4 1083 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 PCDHA8Q9Y5H6 950 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 POLR2AP24928 1970 aaKnown RBP16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 USP17L10C9JJH3 530 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 F5H6K3 240 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 PPP1R11O60927 126 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 PTPREP23469 700 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 ECE1P42892 770 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 KLRC3Q07444 240 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 RESP18Q5W5W9 173 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 GALNT17Q6IS24 598 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 FAM177A1Q8N128 213 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 COA7Q96BR5 231 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 DOCK1Q14185 1865 aa16.98■□□□□ 0.31
CDK5RAP3-218ENST00000580391 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP3-218ENST00000580391 hCG_1984214I3L0E3 225 aa16.97■□□□□ 0.31
CDK5RAP3-218ENST00000580391 TNFAIP1Q13829 316 aa16.97■□□□□ 0.31
CDK5RAP3-218ENST00000580391 ZNF174Q15697 407 aa16.97■□□□□ 0.31
CDK5RAP3-218ENST00000580391 ZNF713Q8N859 430 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP3-218ENST00000580391 ACER1Q8TDN7 264 aa16.97■□□□□ 0.31
CDK5RAP3-218ENST00000580391 HPSEQ9Y251 543 aa16.97■□□□□ 0.31
CDK5RAP3-218ENST00000580391 SMCO2A6NFE2 343 aa16.97■□□□□ 0.31
CDK5RAP3-218ENST00000580391 SPECC1Q5M775 1068 aa16.97■□□□□ 0.31
CDK5RAP3-218ENST00000580391 TRPM4Q8TD43 1214 aa16.97■□□□□ 0.31
CDK5RAP3-218ENST00000580391 MTMR8Q96EF0 704 aa16.97■□□□□ 0.31
CDK5RAP3-218ENST00000580391 SYT17Q9BSW7 474 aa16.97■□□□□ 0.31
CDK5RAP3-218ENST00000580391 MYH7BA7E2Y1 1941 aa16.96■□□□□ 0.31
CDK5RAP3-218ENST00000580391 SMCHD1A6NHR9 2005 aa16.96■□□□□ 0.31
CDK5RAP3-218ENST00000580391 PNMA6FA0A0J9YX94 578 aa16.96■□□□□ 0.31
CDK5RAP3-218ENST00000580391 CCDC194A0A1B0GVG4 234 aa16.96■□□□□ 0.31
CDK5RAP3-218ENST00000580391 SOCS7O14512 581 aa16.96■□□□□ 0.31
CDK5RAP3-218ENST00000580391 CCDC192P0DO97 292 aa16.96■□□□□ 0.31
CDK5RAP3-218ENST00000580391 TRAPPC10P48553 1259 aa16.96■□□□□ 0.31
CDK5RAP3-218ENST00000580391 MAP3K10Q02779 954 aa16.96■□□□□ 0.31
CDK5RAP3-218ENST00000580391 TYRO3Q06418 890 aa16.96■□□□□ 0.31
CDK5RAP3-218ENST00000580391 GMCL1Q96IK5 515 aa16.96■□□□□ 0.31
CDK5RAP3-218ENST00000580391 ARHGEF10LQ9HCE6 1279 aa16.96■□□□□ 0.31
CDK5RAP3-218ENST00000580391 C6orf50Q9HD87 102 aa16.96■□□□□ 0.31
CDK5RAP3-218ENST00000580391 SRPRBQ9Y5M8 271 aaKnown RBP16.96■□□□□ 0.31
CDK5RAP3-218ENST00000580391 FAM237AA0A1B0GTK4 181 aa16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 ESYT2A0FGR8 921 aa16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 ZNF202O95125 648 aa16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 CAP2P40123 477 aa16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 CCDC84Q86UT8 332 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 MORC2Q9Y6X9 1032 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 ZBTB5O15062 677 aa16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 CTAGE5O15320 804 aa16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 YBX3P16989 372 aaKnown RBP eCLIP16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 GNA11P29992 359 aa16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 MCM7P33993 719 aa16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 SYKP43405 635 aa16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 INF2Q27J81 1249 aa16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 KIAA1755Q5JYT7 1200 aa16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 SPICE1Q8N0Z3 855 aa16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 ERCC4Q92889 916 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 GPRC5DQ9NZD1 345 aa16.95■□□□□ 0.3
CDK5RAP3-218ENST00000580391 H7C1D1 291 aa16.94■□□□□ 0.3
CDK5RAP3-218ENST00000580391 BMP15O95972 392 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms