RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 CCSAPQ6IQ19 270 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-210ENST00000579308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.75□□□□□ -0.377e-6■□□□□ 10.8
CSNK1D-210ENST00000579308 RNF180Q86T96 592 aa12.75□□□□□ -0.37
CSNK1D-210ENST00000579308 PRPF38AQ8NAV1 312 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-210ENST00000579308 KLHDC9Q8NEP7 349 aa12.75□□□□□ -0.37
CSNK1D-210ENST00000579308 MKNK2Q9HBH9 465 aa12.75□□□□□ -0.37
CSNK1D-210ENST00000579308 EPB41L4AQ9HCS5 686 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-210ENST00000579308 PRDM5Q9NQX1 630 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-210ENST00000579308 CLIP2Q9UDT6 1046 aa12.75□□□□□ -0.37
CSNK1D-210ENST00000579308 TACC3Q9Y6A5 838 aa12.75□□□□□ -0.37
CSNK1D-210ENST00000579308 CDH23Q9H251 3354 aa12.75□□□□□ -0.37
CSNK1D-210ENST00000579308 SYNGAP1Q96PV0 1343 aa12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 A0A1W2PQ45 241 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 A0A1W2PQY0 241 aa12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 MINDY4BA8MYZ0 360 aa12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 KIAA0355O15063 1070 aa12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 RAD21O60216 631 aa12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 ZFYP08048 801 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 AKR1A1P14550 325 aa12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 TSHZ3Q63HK5 1081 aa12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 SNRNP48Q6IEG0 339 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 ANKRD33Q7Z3H0 272 aa12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 STK11IPQ8N1F8 1099 aa12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 LENG1Q96BZ8 264 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 TSEN34Q9BSV6 310 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 SEMA6BQ9H3T3 888 aa12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 MTMR4Q9NYA4 1195 aa12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 SYNPO2Q9UMS6 1093 aa12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 CNPY2Q9Y2B0 182 aa12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 SPTBN5Q9NRC6 3674 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 FRMPD3Q5JV73 1810 aa12.74□□□□□ -0.37
CSNK1D-210ENST00000579308 EYSQ5T1H1 3165 aa12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 M0R2C6 588 aa12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 GPAA1O43292 621 aa12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 CLTBP09497 229 aa12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 GNAT2P19087 354 aa12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 EPHB4P54760 987 aa12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 SMAD3P84022 425 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 ZNF467Q7Z7K2 595 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 CEP95Q96GE4 821 aa12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 FGD4Q96M96 766 aa12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 FAM161BQ96MY7 647 aa12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 TOX2Q96NM4 488 aa12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 CDX2Q99626 313 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 SLC38A10Q9HBR0 1119 aa12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 FAM184BQ9ULE4 1060 aa12.73□□□□□ -0.37
CSNK1D-210ENST00000579308 ZBED4O75132 1171 aa12.72□□□□□ -0.37
CSNK1D-210ENST00000579308 PRDM1O75626 825 aa12.72□□□□□ -0.37
CSNK1D-210ENST00000579308 KCNA4P22459 653 aa12.72□□□□□ -0.37
CSNK1D-210ENST00000579308 ACLYP53396 1101 aa12.72□□□□□ -0.37
CSNK1D-210ENST00000579308 FAAP100Q0VG06 881 aa12.72□□□□□ -0.37
CSNK1D-210ENST00000579308 ZNF697Q5TEC3 545 aa12.72□□□□□ -0.37
CSNK1D-210ENST00000579308 IFNL3Q8IZI9 196 aa12.72□□□□□ -0.37
CSNK1D-210ENST00000579308 ZNF444Q8N0Y2 327 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-210ENST00000579308 GMCL1P1Q8NEA9 526 aa12.72□□□□□ -0.37
CSNK1D-210ENST00000579308 DDX11Q96FC9 970 aa12.72□□□□□ -0.37
CSNK1D-210ENST00000579308 TTYH1Q9H313 450 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-210ENST00000579308 FEM1BQ9UK73 627 aa12.72□□□□□ -0.37
CSNK1D-210ENST00000579308 SYNRGQ9UMZ2 1314 aa12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 BAZ2AQ9UIF9 1905 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 MOXD2PA6NHM9 499 aa12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 PQBP1O60828 265 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 DUSP11O75319 330 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 TTLL1O95922 423 aa12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 CDK7P50613 346 aa12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 OAZ1P54368 228 aa12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 ACVR2BQ13705 512 aa12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 KCNA10Q16322 511 aa12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 CPXCR1Q8N123 301 aa12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 NEDD1Q8NHV4 660 aa12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 KIFC2Q96AC6 838 aa12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 GPATCH3Q96I76 525 aa12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 ZNF287Q9HBT7 754 aa12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 RAVER2Q9HCJ3 691 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-210ENST00000579308 PRUNE2Q8WUY3 3088 aa12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 MYADML2A6NDP7 307 aa12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 ADCY6O43306 1168 aa12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 APPP05067 770 aa12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 CST5P28325 142 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 TDO2P48775 406 aa12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 NKX3-2P78367 333 aa12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 IRX5P78411 483 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 CHST13Q8NET6 341 aa12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 PI4K2BQ8TCG2 481 aa12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 NUP133Q8WUM0 1156 aa12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 SEC62Q99442 399 aaKnown RBP12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 COL25A1Q9BXS0 654 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 KATNBL1Q9H079 304 aa12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 UPF3AQ9H1J1 476 aaKnown RBP12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 TMEM39AQ9NV64 488 aa12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-210ENST00000579308 PLIN4Q96Q06 1357 aa12.69□□□□□ -0.38
CSNK1D-210ENST00000579308 PARP14Q460N5 1801 aa12.69□□□□□ -0.38
CSNK1D-210ENST00000579308 SMCHD1A6NHR9 2005 aa12.69□□□□□ -0.38
CSNK1D-210ENST00000579308 ELP1O95163 1332 aa12.69□□□□□ -0.38
CSNK1D-210ENST00000579308 TTC41PQ6P2S7 1318 aa12.69□□□□□ -0.38
CSNK1D-210ENST00000579308 GREB1LQ9C091 1923 aaPredicted RBP12.69□□□□□ -0.38
CSNK1D-210ENST00000579308 DCDC2CA8MYV0 355 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms