RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 MYH8P13535 1937 aa10.54□□□□□ -0.72
BRIP1-204ENST00000579028 MAGEB6P1A0A0J9YX57 407 aa10.54□□□□□ -0.72
BRIP1-204ENST00000579028 MYADML2A6NDP7 307 aa10.54□□□□□ -0.72
BRIP1-204ENST00000579028 IPO8O15397 1037 aaKnown RBP10.54□□□□□ -0.72
BRIP1-204ENST00000579028 DUSP11O75319 330 aaKnown RBP10.54□□□□□ -0.72
BRIP1-204ENST00000579028 SNAI1O95863 264 aaPredicted RBP10.54□□□□□ -0.72
BRIP1-204ENST00000579028 IGFBP4P22692 258 aa10.54□□□□□ -0.72
BRIP1-204ENST00000579028 STAT3P40763 770 aa10.54□□□□□ -0.72
BRIP1-204ENST00000579028 ATP8B2P98198 1209 aa10.54□□□□□ -0.72
BRIP1-204ENST00000579028 ICA1Q05084 483 aa10.54□□□□□ -0.72
BRIP1-204ENST00000579028 CCDC85BQ15834 202 aaPredicted RBP10.54□□□□□ -0.72
BRIP1-204ENST00000579028 MAMDC4Q6UXC1 1216 aa10.54□□□□□ -0.72
BRIP1-204ENST00000579028 REPS2Q8NFH8 660 aa10.54□□□□□ -0.72
BRIP1-204ENST00000579028 HERVK_113Q902F9 699 aa10.54□□□□□ -0.72
BRIP1-204ENST00000579028 GBF1Q92538 1859 aa10.54□□□□□ -0.72
BRIP1-204ENST00000579028 GLT1D1Q96MS3 346 aa10.54□□□□□ -0.72
BRIP1-204ENST00000579028 DCP1AQ9NPI6 582 aaPredicted RBP10.54□□□□□ -0.72
BRIP1-204ENST00000579028 CXXC1Q9P0U4 656 aaPredicted RBP10.54□□□□□ -0.72
BRIP1-204ENST00000579028 ZNF214Q9UL59 606 aaPredicted RBP10.54□□□□□ -0.72
BRIP1-204ENST00000579028 TNNQ9UQP3 1299 aa10.54□□□□□ -0.72
BRIP1-204ENST00000579028 MUC3AQ02505 3323 aa10.54□□□□□ -0.72
BRIP1-204ENST00000579028 SYNGAP1Q96PV0 1343 aa10.54□□□□□ -0.72
BRIP1-204ENST00000579028 DNAJC25-GNG10A0A024R161 153 aa10.53□□□□□ -0.72
BRIP1-204ENST00000579028 ARVCFO00192 962 aa10.53□□□□□ -0.72
BRIP1-204ENST00000579028 VWA5AO00534 786 aa10.53□□□□□ -0.72
BRIP1-204ENST00000579028 ACRP10323 421 aa10.53□□□□□ -0.72
BRIP1-204ENST00000579028 BMP1P13497 986 aa10.53□□□□□ -0.72
BRIP1-204ENST00000579028 FAM126BQ8IXS8 530 aa10.53□□□□□ -0.72
BRIP1-204ENST00000579028 PCSK9Q8NBP7 692 aaKnown RBP10.53□□□□□ -0.72
BRIP1-204ENST00000579028 CCDC17Q96LX7 622 aa10.53□□□□□ -0.72
BRIP1-204ENST00000579028 NECAB3Q96P71 396 aaPredicted RBP10.53□□□□□ -0.72
BRIP1-204ENST00000579028 PPP1R12CQ9BZL4 782 aa10.53□□□□□ -0.72
BRIP1-204ENST00000579028 UPF3AQ9H1J1 476 aaKnown RBP10.53□□□□□ -0.72
BRIP1-204ENST00000579028 TSPYL2Q9H2G4 693 aaPredicted RBP10.53□□□□□ -0.72
BRIP1-204ENST00000579028 MTIF3Q9H2K0 278 aaKnown RBP10.53□□□□□ -0.72
BRIP1-204ENST00000579028 NKX2-4Q9H2Z4 354 aa10.53□□□□□ -0.72
BRIP1-204ENST00000579028 IL23AQ9NPF7 189 aa10.53□□□□□ -0.72
BRIP1-204ENST00000579028 FBXO28Q9NVF7 368 aa10.53□□□□□ -0.72
BRIP1-204ENST00000579028 PPP1R9AQ9ULJ8 1098 aa10.53□□□□□ -0.72
BRIP1-204ENST00000579028 TCF20Q9UGU0 1960 aaKnown RBP10.52□□□□□ -0.72
BRIP1-204ENST00000579028 A0A0U1RQG5 324 aaPredicted RBP10.52□□□□□ -0.73
BRIP1-204ENST00000579028 TLR3O15455 904 aaKnown RBP10.52□□□□□ -0.73
BRIP1-204ENST00000579028 BCAR3O75815 825 aa10.52□□□□□ -0.73
BRIP1-204ENST00000579028 CD4P01730 458 aa10.52□□□□□ -0.73
BRIP1-204ENST00000579028 ASGR1P07306 291 aa10.52□□□□□ -0.73
BRIP1-204ENST00000579028 CYP2D6P10635 497 aa10.52□□□□□ -0.73
BRIP1-204ENST00000579028 AKR1B1P15121 316 aa10.52□□□□□ -0.73
BRIP1-204ENST00000579028 NKX3-2P78367 333 aa10.52□□□□□ -0.73
BRIP1-204ENST00000579028 IRX5P78411 483 aaPredicted RBP10.52□□□□□ -0.73
BRIP1-204ENST00000579028 ZNF467Q7Z7K2 595 aaPredicted RBP10.52□□□□□ -0.73
BRIP1-204ENST00000579028 SDR42E1Q8WUS8 393 aa10.52□□□□□ -0.73
BRIP1-204ENST00000579028 DYNLL2Q96FJ2 89 aa10.52□□□□□ -0.73
BRIP1-204ENST00000579028 SLC28A3Q9HAS3 691 aa10.52□□□□□ -0.73
BRIP1-204ENST00000579028 YBX2Q9Y2T7 364 aaKnown RBP10.52□□□□□ -0.73
BRIP1-204ENST00000579028 MYO9BQ13459 2157 aa10.52□□□□□ -0.73
BRIP1-204ENST00000579028 APBB1O00213 710 aa10.51□□□□□ -0.73
BRIP1-204ENST00000579028 ADCY6O43306 1168 aa10.51□□□□□ -0.73
BRIP1-204ENST00000579028 FGBP02675 491 aa10.51□□□□□ -0.73
BRIP1-204ENST00000579028 C6orf222P0C671 652 aaPredicted RBP10.51□□□□□ -0.73
BRIP1-204ENST00000579028 EEF2P13639 858 aaKnown RBP10.51□□□□□ -0.73
BRIP1-204ENST00000579028 PDE6AP16499 860 aa10.51□□□□□ -0.73
BRIP1-204ENST00000579028 GJA9P57773 515 aa10.51□□□□□ -0.73
BRIP1-204ENST00000579028 TTF1Q15361 905 aaPredicted RBP10.51□□□□□ -0.73
BRIP1-204ENST00000579028 AAK1Q2M2I8 961 aa10.51□□□□□ -0.73
BRIP1-204ENST00000579028 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.51□□□□□ -0.73
BRIP1-204ENST00000579028 LCORLQ8N3X6 602 aa10.51□□□□□ -0.73
BRIP1-204ENST00000579028 CLUAP1Q96AJ1 413 aa10.51□□□□□ -0.73
BRIP1-204ENST00000579028 SPC25Q9HBM1 224 aa10.51□□□□□ -0.73
BRIP1-204ENST00000579028 ZHX1Q9UKY1 873 aaPredicted RBP10.51□□□□□ -0.73
BRIP1-204ENST00000579028 TCRBV5S4A2TA0A5A2 114 aa10.5□□□□□ -0.73
BRIP1-204ENST00000579028 CTAGE5O15320 804 aa10.5□□□□□ -0.73
BRIP1-204ENST00000579028 CYP2C18P33260 490 aa10.5□□□□□ -0.73
BRIP1-204ENST00000579028 CDK8P49336 464 aa10.5□□□□□ -0.73
BRIP1-204ENST00000579028 ACVR2BQ13705 512 aa10.5□□□□□ -0.73
BRIP1-204ENST00000579028 SLC9C2Q5TAH2 1124 aa10.5□□□□□ -0.73
BRIP1-204ENST00000579028 TMEM57Q8N5G2 664 aa10.5□□□□□ -0.73
BRIP1-204ENST00000579028 SLC43A3Q8NBI5 491 aa10.5□□□□□ -0.73
BRIP1-204ENST00000579028 VTI1AQ96AJ9 217 aa10.5□□□□□ -0.73
BRIP1-204ENST00000579028 DDX11Q96FC9 970 aa10.5□□□□□ -0.73
BRIP1-204ENST00000579028 TEX13BQ9BXU2 312 aa10.5□□□□□ -0.73
BRIP1-204ENST00000579028 ABHD16BQ9H3Z7 469 aa10.5□□□□□ -0.73
BRIP1-204ENST00000579028 KANSL2Q9H9L4 492 aa10.5□□□□□ -0.73
BRIP1-204ENST00000579028 GOPCQ9HD26 462 aa10.5□□□□□ -0.73
BRIP1-204ENST00000579028 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.5□□□□□ -0.73
BRIP1-204ENST00000579028 ZNF532Q9HCE3 1301 aa10.5□□□□□ -0.73
BRIP1-204ENST00000579028 BAZ2AQ9UIF9 1905 aaKnown RBP10.49□□□□□ -0.73
BRIP1-204ENST00000579028 MCM3APO60318 1980 aa10.49□□□□□ -0.73
BRIP1-204ENST00000579028 ATP2A1O14983 1001 aa10.49□□□□□ -0.73
BRIP1-204ENST00000579028 ERC2O15083 957 aa10.49□□□□□ -0.73
BRIP1-204ENST00000579028 POU3F3P20264 500 aaPredicted RBP10.49□□□□□ -0.73
BRIP1-204ENST00000579028 KCNQ1P51787 676 aa10.49□□□□□ -0.73
BRIP1-204ENST00000579028 TFF2Q03403 129 aa10.49□□□□□ -0.73
BRIP1-204ENST00000579028 CCDC144BQ3MJ40 725 aa10.49□□□□□ -0.73
BRIP1-204ENST00000579028 GNASQ5JWF2 1037 aa10.49□□□□□ -0.73
BRIP1-204ENST00000579028 FAM83BQ5T0W9 1011 aa10.49□□□□□ -0.73
BRIP1-204ENST00000579028 C12orf60Q5U649 245 aa10.49□□□□□ -0.73
BRIP1-204ENST00000579028 SNRNP48Q6IEG0 339 aaKnown RBP10.49□□□□□ -0.73
BRIP1-204ENST00000579028 C16orf86Q6ZW13 317 aa10.49□□□□□ -0.73
BRIP1-204ENST00000579028 AACSQ86V21 672 aa10.49□□□□□ -0.73
BRIP1-204ENST00000579028 FRAT1Q92837 279 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms