RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 NYAP2Q9P242 653 aa23.2■■□□□ 1.3
SMG8-203ENST00000578922 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.2■■□□□ 1.3
SMG8-203ENST00000578922 CAMK4Q16566 473 aa23.19■■□□□ 1.3
SMG8-203ENST00000578922 PPP4R3BQ5MIZ7 849 aa23.19■■□□□ 1.3
SMG8-203ENST00000578922 NUP62CLQ9H1M0 184 aa23.19■■□□□ 1.3
SMG8-203ENST00000578922 GOLPH3LQ9H4A5 285 aa23.19■■□□□ 1.3
SMG8-203ENST00000578922 SEC63Q9UGP8 760 aaKnown RBP23.19■■□□□ 1.3
SMG8-203ENST00000578922 HACL1Q9UJ83 578 aa23.19■■□□□ 1.3
SMG8-203ENST00000578922 TNNI2P48788 182 aa23.18■■□□□ 1.3
SMG8-203ENST00000578922 SLC39A14Q15043 492 aa23.18■■□□□ 1.3
SMG8-203ENST00000578922 STXBP3O00186 592 aa23.18■■□□□ 1.3
SMG8-203ENST00000578922 DDX19AQ9NUU7 478 aaKnown RBP23.18■■□□□ 1.3
SMG8-203ENST00000578922 PGAP2Q9UHJ9 254 aa23.18■■□□□ 1.3
SMG8-203ENST00000578922 PCDHB6Q9Y5E3 794 aa23.18■■□□□ 1.3
SMG8-203ENST00000578922 YBX3P16989 372 aaKnown RBP eCLIP23.17■■□□□ 1.3
SMG8-203ENST00000578922 PTPAQ15257 358 aa23.17■■□□□ 1.3
SMG8-203ENST00000578922 SLFN13Q68D06 897 aa23.17■■□□□ 1.3
SMG8-203ENST00000578922 MTERF4Q7Z6M4 381 aaKnown RBP23.17■■□□□ 1.3
SMG8-203ENST00000578922 MKL1Q969V6 931 aa23.17■■□□□ 1.3
SMG8-203ENST00000578922 BARHL2Q9NY43 387 aa23.17■■□□□ 1.3
SMG8-203ENST00000578922 H7C1D1 291 aa23.17■■□□□ 1.3
SMG8-203ENST00000578922 RILPL1Q5EBL4 403 aa23.17■■□□□ 1.3
SMG8-203ENST00000578922 FSIP1Q8NA03 581 aa23.17■■□□□ 1.3
SMG8-203ENST00000578922 FAM200AQ8TCP9 573 aa23.17■■□□□ 1.3
SMG8-203ENST00000578922 RASGRP4Q8TDF6 673 aa23.17■■□□□ 1.3
SMG8-203ENST00000578922 TNFRSF25Q93038 417 aa23.17■■□□□ 1.3
SMG8-203ENST00000578922 RIOX1Q9H6W3 641 aa23.17■■□□□ 1.3
SMG8-203ENST00000578922 GOLGA6L6A8MZA4 724 aa23.16■■□□□ 1.3
SMG8-203ENST00000578922 SLC1A4P43007 532 aa23.16■■□□□ 1.3
SMG8-203ENST00000578922 NOLC1Q14978 699 aaKnown RBP eCLIP23.16■■□□□ 1.3
SMG8-203ENST00000578922 PIK3AP1Q6ZUJ8 805 aa23.16■■□□□ 1.3
SMG8-203ENST00000578922 PRIMPOLQ96LW4 560 aa23.16■■□□□ 1.3
SMG8-203ENST00000578922 NUP88Q99567 741 aaPredicted RBP23.16■■□□□ 1.3
SMG8-203ENST00000578922 SH3GLB2Q9NR46 395 aa23.16■■□□□ 1.3
SMG8-203ENST00000578922 SPTLC3Q9NUV7 552 aa23.16■■□□□ 1.3
SMG8-203ENST00000578922 A0A1W2PRG0 241 aa23.16■■□□□ 1.3
SMG8-203ENST00000578922 MMP14P50281 582 aa23.16■■□□□ 1.3
SMG8-203ENST00000578922 NAPAP54920 295 aa23.16■■□□□ 1.3
SMG8-203ENST00000578922 ADALQ6DHV7 355 aa23.16■■□□□ 1.3
SMG8-203ENST00000578922 ADGRF4Q8IZF3 695 aa23.16■■□□□ 1.3
SMG8-203ENST00000578922 TRPM4Q8TD43 1214 aa23.16■■□□□ 1.3
SMG8-203ENST00000578922 A0A1B0GVL5 298 aa23.15■■□□□ 1.3
SMG8-203ENST00000578922 F5H6K3 240 aa23.15■■□□□ 1.3
SMG8-203ENST00000578922 CALML3P27482 149 aa23.15■■□□□ 1.3
SMG8-203ENST00000578922 SMARCA1P28370 1054 aa23.15■■□□□ 1.3
SMG8-203ENST00000578922 ECE1P42892 770 aa23.15■■□□□ 1.3
SMG8-203ENST00000578922 KLRC3Q07444 240 aa23.15■■□□□ 1.3
SMG8-203ENST00000578922 TNFAIP1Q13829 316 aa23.15■■□□□ 1.3
SMG8-203ENST00000578922 RBM43Q6ZSC3 357 aaKnown RBP23.15■■□□□ 1.3
SMG8-203ENST00000578922 BLIDQ8IZY5 108 aa23.15■■□□□ 1.3
SMG8-203ENST00000578922 RNF181Q9P0P0 153 aa23.15■■□□□ 1.3
SMG8-203ENST00000578922 ZBTB21Q9ULJ3 1066 aa23.15■■□□□ 1.3
SMG8-203ENST00000578922 PCDHA4Q9UN74 947 aa23.15■■□□□ 1.3
SMG8-203ENST00000578922 WNT7AO00755 349 aa23.14■■□□□ 1.3
SMG8-203ENST00000578922 GPATCH4Q5T3I0 446 aaKnown RBP23.14■■□□□ 1.3
SMG8-203ENST00000578922 CCDC73Q6ZRK6 1079 aa23.14■■□□□ 1.3
SMG8-203ENST00000578922 SPICE1Q8N0Z3 855 aa23.14■■□□□ 1.3
SMG8-203ENST00000578922 ACER1Q8TDN7 264 aa23.14■■□□□ 1.3
SMG8-203ENST00000578922 TEPSINQ96N21 525 aa23.14■■□□□ 1.3
SMG8-203ENST00000578922 CLIC6Q96NY7 704 aa23.14■■□□□ 1.3
SMG8-203ENST00000578922 JMJD4Q9H9V9 463 aa23.14■■□□□ 1.3
SMG8-203ENST00000578922 EPS15P42566 896 aa23.14■■□□□ 1.29
SMG8-203ENST00000578922 CCDC84Q86UT8 332 aaPredicted RBP23.14■■□□□ 1.29
SMG8-203ENST00000578922 GPC2Q8N158 579 aa23.14■■□□□ 1.29
SMG8-203ENST00000578922 CCDC148Q8NFR7 591 aa23.14■■□□□ 1.29
SMG8-203ENST00000578922 MRPS27Q92552 414 aaKnown RBP23.14■■□□□ 1.29
SMG8-203ENST00000578922 COA7Q96BR5 231 aa23.14■■□□□ 1.29
SMG8-203ENST00000578922 GPRC5DQ9NZD1 345 aa23.14■■□□□ 1.29
SMG8-203ENST00000578922 MRVI1Q9Y6F6 885 aa23.14■■□□□ 1.29
SMG8-203ENST00000578922 USP17L10C9JJH3 530 aa23.13■■□□□ 1.29
SMG8-203ENST00000578922 TBC1D12O60347 775 aa23.13■■□□□ 1.29
SMG8-203ENST00000578922 NDUFB10O96000 172 aa23.13■■□□□ 1.29
SMG8-203ENST00000578922 TYRO3Q06418 890 aa23.13■■□□□ 1.29
SMG8-203ENST00000578922 AXDND1Q5T1B0 1012 aaPredicted RBP23.13■■□□□ 1.29
SMG8-203ENST00000578922 DEFB129Q9H1M3 183 aa23.13■■□□□ 1.29
SMG8-203ENST00000578922 TNMDQ9H2S6 317 aa23.13■■□□□ 1.29
SMG8-203ENST00000578922 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.13■■□□□ 1.29
SMG8-203ENST00000578922 DDNO94850 711 aaPredicted RBP23.13■■□□□ 1.29
SMG8-203ENST00000578922 ANGEL2Q5VTE6 544 aaKnown RBP23.13■■□□□ 1.29
SMG8-203ENST00000578922 PRAMEF18Q5VWM3 479 aa23.13■■□□□ 1.29
SMG8-203ENST00000578922 DCAF4Q8WV16 495 aa23.13■■□□□ 1.29
SMG8-203ENST00000578922 TTC12Q9H892 705 aaPredicted RBP23.13■■□□□ 1.29
SMG8-203ENST00000578922 SBF1O95248 1867 aa23.12■■□□□ 1.29
SMG8-203ENST00000578922 CKAP2LQ8IYA6 745 aa23.12■■□□□ 1.29
SMG8-203ENST00000578922 SMCO2A6NFE2 343 aa23.11■■□□□ 1.29
SMG8-203ENST00000578922 TRIM75PA6NK02 468 aa23.11■■□□□ 1.29
SMG8-203ENST00000578922 PPP6R2O75170 966 aa23.11■■□□□ 1.29
SMG8-203ENST00000578922 CAP2P40123 477 aa23.11■■□□□ 1.29
SMG8-203ENST00000578922 NDUFA8P51970 172 aa23.11■■□□□ 1.29
SMG8-203ENST00000578922 ZNF174Q15697 407 aa23.11■■□□□ 1.29
SMG8-203ENST00000578922 ZYXQ15942 572 aaKnown RBP23.11■■□□□ 1.29
SMG8-203ENST00000578922 DNTTIP2Q5QJE6 756 aaKnown RBP23.11■■□□□ 1.29
SMG8-203ENST00000578922 JMYQ8N9B5 988 aa23.11■■□□□ 1.29
SMG8-203ENST00000578922 MYRIPQ8NFW9 859 aa23.11■■□□□ 1.29
SMG8-203ENST00000578922 CLSTN2Q9H4D0 955 aa23.11■■□□□ 1.29
SMG8-203ENST00000578922 A0A1W2PQ27 194 aa23.11■■□□□ 1.29
SMG8-203ENST00000578922 A0A1W2PQ64 194 aa23.11■■□□□ 1.29
SMG8-203ENST00000578922 A0A1W2PQD8 194 aa23.11■■□□□ 1.29
SMG8-203ENST00000578922 CAVIN2O95810 425 aa23.11■■□□□ 1.29
SMG8-203ENST00000578922 IKQ13123 557 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms