RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 BMP3P12645 472 aa17.26■□□□□ 0.35
CCDC57-212ENST00000578910 CYBAP13498 195 aa17.26■□□□□ 0.35
CCDC57-212ENST00000578910 MCCP23508 829 aa17.26■□□□□ 0.35
CCDC57-212ENST00000578910 MAML3Q96JK9 1138 aa17.26■□□□□ 0.35
CCDC57-212ENST00000578910 DDX20Q9UHI6 824 aaKnown RBP17.26■□□□□ 0.35
CCDC57-212ENST00000578910 STX8Q9UNK0 236 aa17.26■□□□□ 0.35
CCDC57-212ENST00000578910 PLIN4Q96Q06 1357 aa17.26■□□□□ 0.35
CCDC57-212ENST00000578910 MYH4Q9Y623 1939 aa17.25■□□□□ 0.35
CCDC57-212ENST00000578910 ORC4O43929 436 aa17.25■□□□□ 0.35
CCDC57-212ENST00000578910 KCTD2Q14681 263 aa17.25■□□□□ 0.35
CCDC57-212ENST00000578910 ZNF792Q3KQV3 632 aa17.25■□□□□ 0.35
CCDC57-212ENST00000578910 SNRNP48Q6IEG0 339 aaKnown RBP17.25■□□□□ 0.35
CCDC57-212ENST00000578910 CHRDL2Q6WN34 429 aa17.25■□□□□ 0.35
CCDC57-212ENST00000578910 TEX13BQ9BXU2 312 aa17.25■□□□□ 0.35
CCDC57-212ENST00000578910 RAVER2Q9HCJ3 691 aaKnown RBP17.25■□□□□ 0.35
CCDC57-212ENST00000578910 TOMM22Q9NS69 142 aa17.25■□□□□ 0.35
CCDC57-212ENST00000578910 CTDP1Q9Y5B0 961 aaPredicted RBP17.25■□□□□ 0.35
CCDC57-212ENST00000578910 PFASO15067 1338 aa17.24■□□□□ 0.35
CCDC57-212ENST00000578910 CCDC171Q6TFL3 1326 aa17.24■□□□□ 0.35
CCDC57-212ENST00000578910 ATP2A1O14983 1001 aa17.24■□□□□ 0.35
CCDC57-212ENST00000578910 COL6A1P12109 1028 aa17.24■□□□□ 0.35
CCDC57-212ENST00000578910 PDE4AP27815 886 aa17.24■□□□□ 0.35
CCDC57-212ENST00000578910 COPB2P35606 906 aa17.24■□□□□ 0.35
CCDC57-212ENST00000578910 HAND2P61296 217 aa17.24■□□□□ 0.35
CCDC57-212ENST00000578910 RRP12Q5JTH9 1297 aaKnown RBP17.24■□□□□ 0.35
CCDC57-212ENST00000578910 RCSD1Q6JBY9 416 aa17.24■□□□□ 0.35
CCDC57-212ENST00000578910 CWC27Q6UX04 472 aaKnown RBP17.24■□□□□ 0.35
CCDC57-212ENST00000578910 SLC38A10Q9HBR0 1119 aa17.24■□□□□ 0.35
CCDC57-212ENST00000578910 DIS3Q9Y2L1 958 aaKnown RBP17.24■□□□□ 0.35
CCDC57-212ENST00000578910 MSCO60682 206 aa17.23■□□□□ 0.35
CCDC57-212ENST00000578910 NOVP48745 357 aa17.23■□□□□ 0.35
CCDC57-212ENST00000578910 PPP4R3BQ5MIZ7 849 aa17.23■□□□□ 0.35
CCDC57-212ENST00000578910 ANO1Q5XXA6 986 aa17.23■□□□□ 0.35
CCDC57-212ENST00000578910 CHURC1Q8WUH1 139 aa17.23■□□□□ 0.35
CCDC57-212ENST00000578910 STAG1Q8WVM7 1258 aa17.23■□□□□ 0.35
CCDC57-212ENST00000578910 GMCL1Q96IK5 515 aa17.23■□□□□ 0.35
CCDC57-212ENST00000578910 TINF2Q9BSI4 451 aa17.23■□□□□ 0.35
CCDC57-212ENST00000578910 SEPT4O43236 478 aa17.22■□□□□ 0.35
CCDC57-212ENST00000578910 SLC1A4P43007 532 aa17.22■□□□□ 0.35
CCDC57-212ENST00000578910 MFAP1P55081 439 aaKnown RBP17.22■□□□□ 0.35
CCDC57-212ENST00000578910 KCTD1Q719H9 257 aa17.22■□□□□ 0.35
CCDC57-212ENST00000578910 C7orf61Q8IZ16 206 aa17.22■□□□□ 0.35
CCDC57-212ENST00000578910 DDX11Q96FC9 970 aa17.22■□□□□ 0.35
CCDC57-212ENST00000578910 SENP6Q9GZR1 1112 aaPredicted RBP17.22■□□□□ 0.35
CCDC57-212ENST00000578910 TCP11L1Q9NUJ3 509 aa17.22■□□□□ 0.35
CCDC57-212ENST00000578910 RBM27Q9P2N5 1060 aaKnown RBP17.22■□□□□ 0.35
CCDC57-212ENST00000578910 ISY1Q9ULR0 285 aaKnown RBP17.22■□□□□ 0.35
CCDC57-212ENST00000578910 MTMR7Q9Y216 660 aa17.22■□□□□ 0.35
CCDC57-212ENST00000578910 CEP290O15078 2479 aa17.22■□□□□ 0.35
CCDC57-212ENST00000578910 PLA2G6O60733 806 aa17.21■□□□□ 0.35
CCDC57-212ENST00000578910 FDX1P10109 184 aa17.21■□□□□ 0.35
CCDC57-212ENST00000578910 TAL1P17542 331 aaPredicted RBP17.21■□□□□ 0.35
CCDC57-212ENST00000578910 STAT2P52630 851 aa17.21■□□□□ 0.35
CCDC57-212ENST00000578910 AKNAD1Q5T1N1 836 aa17.21■□□□□ 0.35
CCDC57-212ENST00000578910 GJC2Q5T442 439 aaPredicted RBP17.21■□□□□ 0.35
CCDC57-212ENST00000578910 MFSD6Q6ZSS7 791 aa17.21■□□□□ 0.35
CCDC57-212ENST00000578910 FAM160B2Q86V87 743 aa17.21■□□□□ 0.35
CCDC57-212ENST00000578910 PRO3102Q9H379 93 aa17.21■□□□□ 0.35
CCDC57-212ENST00000578910 DIAPH3Q9NSV4 1193 aa17.21■□□□□ 0.35
CCDC57-212ENST00000578910 ZMYND8Q9ULU4 1186 aaPredicted RBP17.21■□□□□ 0.35
CCDC57-212ENST00000578910 ZNF236Q9UL36 1845 aa17.21■□□□□ 0.35
CCDC57-212ENST00000578910 ZMYM6O95789 1325 aa17.21■□□□□ 0.34
CCDC57-212ENST00000578910 ALPK3Q96L96 1907 aa17.2■□□□□ 0.34
CCDC57-212ENST00000578910 DNAJC25-GNG10A0A024R161 153 aa17.2■□□□□ 0.34
CCDC57-212ENST00000578910 HIP1O00291 1037 aa17.2■□□□□ 0.34
CCDC57-212ENST00000578910 ZNF213O14771 459 aa17.2■□□□□ 0.34
CCDC57-212ENST00000578910 OAZ1P54368 228 aa17.2■□□□□ 0.34
CCDC57-212ENST00000578910 SNAP25P60880 206 aa17.2■□□□□ 0.34
CCDC57-212ENST00000578910 IKQ13123 557 aaPredicted RBP17.2■□□□□ 0.34
CCDC57-212ENST00000578910 LRRC26Q2I0M4 334 aa17.2■□□□□ 0.34
CCDC57-212ENST00000578910 RASGRP2Q7LDG7 609 aa17.2■□□□□ 0.34
CCDC57-212ENST00000578910 ARRDC4Q8NCT1 418 aa17.2■□□□□ 0.34
CCDC57-212ENST00000578910 AGBL1Q96MI9 1066 aa17.2■□□□□ 0.34
CCDC57-212ENST00000578910 TMEM47Q9BQJ4 181 aa17.2■□□□□ 0.34
CCDC57-212ENST00000578910 SMCHD1A6NHR9 2005 aa17.2■□□□□ 0.34
CCDC57-212ENST00000578910 SYN1P17600 705 aa17.19■□□□□ 0.34
CCDC57-212ENST00000578910 FXR1P51114 621 aaKnown RBP eCLIP17.19■□□□□ 0.34
CCDC57-212ENST00000578910 TTBK2Q6IQ55 1244 aa17.19■□□□□ 0.34
CCDC57-212ENST00000578910 TBC1D10CQ8IV04 446 aa17.19■□□□□ 0.34
CCDC57-212ENST00000578910 ANKRD35Q8N283 1001 aa17.19■□□□□ 0.34
CCDC57-212ENST00000578910 CHST13Q8NET6 341 aa17.19■□□□□ 0.34
CCDC57-212ENST00000578910 PRR12Q9ULL5 1215 aa17.19■□□□□ 0.34
CCDC57-212ENST00000578910 ZNF536O15090 1300 aa17.19■□□□□ 0.34
CCDC57-212ENST00000578910 DNM1LO00429 736 aa17.18■□□□□ 0.34
CCDC57-212ENST00000578910 SNAI1O95863 264 aaPredicted RBP17.18■□□□□ 0.34
CCDC57-212ENST00000578910 ZNF865P0CJ78 1059 aaPredicted RBP17.18■□□□□ 0.34
CCDC57-212ENST00000578910 TOP1P11387 765 aaKnown RBP17.18■□□□□ 0.34
CCDC57-212ENST00000578910 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCDC57-212ENST00000578910 TTC14Q96N46 770 aa17.18■□□□□ 0.34
CCDC57-212ENST00000578910 HOMER2Q9NSB8 354 aa17.18■□□□□ 0.34
CCDC57-212ENST00000578910 FBXO40Q9UH90 709 aa17.18■□□□□ 0.34
CCDC57-212ENST00000578910 NRBP1Q9UHY1 535 aa17.18■□□□□ 0.34
CCDC57-212ENST00000578910 MYCNP04198 464 aaPredicted RBP17.17■□□□□ 0.34
CCDC57-212ENST00000578910 PCP11498 1178 aaKnown RBP17.17■□□□□ 0.34
CCDC57-212ENST00000578910 GSPT1P15170 499 aaKnown RBP17.17■□□□□ 0.34
CCDC57-212ENST00000578910 SLC16A2P36021 539 aa17.17■□□□□ 0.34
CCDC57-212ENST00000578910 ATN1P54259 1190 aaPredicted RBP17.17■□□□□ 0.34
CCDC57-212ENST00000578910 TTC22Q5TAA0 569 aa17.17■□□□□ 0.34
CCDC57-212ENST00000578910 CCDC174Q6PII3 467 aa17.17■□□□□ 0.34
CCDC57-212ENST00000578910 MAMDC4Q6UXC1 1216 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms