RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 REPS2Q8NFH8 660 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 ESR2Q92731 530 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 DEFB118Q96PH6 123 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 GDF15Q99988 308 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 IVNS1ABPQ9Y6Y0 642 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 ATP2A1O14983 1001 aa16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 PLA2G6O60733 806 aa16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 FDX1P10109 184 aa16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 BMP3P12645 472 aa16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 ERCC3P19447 782 aa16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 CYP2B6P20813 491 aa16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 COPB2P35606 906 aa16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 LRIT3Q3SXY7 679 aa16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 BMP2KLQ5H9B9 411 aa16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 RIOX2Q8IUF8 465 aa16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 ABRAQ8N0Z2 381 aa16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 ANKLE1Q8NAG6 615 aa16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 PAWRQ96IZ0 340 aaKnown RBP16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 APBA2Q99767 749 aa16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 CRISPLD2Q9H0B8 497 aa16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 PAK6Q9NQU5 681 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 ZNF214Q9UL59 606 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-208ENST00000578501 CUL9Q8IWT3 2517 aa16.08■□□□□ 0.17
CSNK1D-208ENST00000578501 LAMA4Q16363 1823 aa16.08■□□□□ 0.17
CSNK1D-208ENST00000578501 TOP1P11387 765 aaKnown RBP16.08■□□□□ 0.16
CSNK1D-208ENST00000578501 STAT3P40763 770 aa16.08■□□□□ 0.16
CSNK1D-208ENST00000578501 SLC1A4P43007 532 aa16.08■□□□□ 0.16
CSNK1D-208ENST00000578501 PLS1Q14651 629 aa16.08■□□□□ 0.16
CSNK1D-208ENST00000578501 CCDC178Q5BJE1 867 aa16.08■□□□□ 0.16
CSNK1D-208ENST00000578501 WDR78Q5VTH9 848 aa16.08■□□□□ 0.16
CSNK1D-208ENST00000578501 SAMD1Q6SPF0 538 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-208ENST00000578501 FAM160B2Q86V87 743 aa16.08■□□□□ 0.16
CSNK1D-208ENST00000578501 CHURC1Q8WUH1 139 aa16.08■□□□□ 0.16
CSNK1D-208ENST00000578501 TRIB2Q92519 343 aa16.08■□□□□ 0.16
CSNK1D-208ENST00000578501 CNNM2Q9H8M5 875 aa16.08■□□□□ 0.16
CSNK1D-208ENST00000578501 SLC38A10Q9HBR0 1119 aa16.08■□□□□ 0.16
CSNK1D-208ENST00000578501 NEDD4P46934 1319 aa16.08■□□□□ 0.16
CSNK1D-208ENST00000578501 ZBED4O75132 1171 aa16.07■□□□□ 0.16
CSNK1D-208ENST00000578501 MCCP23508 829 aa16.07■□□□□ 0.16
CSNK1D-208ENST00000578501 STAT2P52630 851 aa16.07■□□□□ 0.16
CSNK1D-208ENST00000578501 OAZ1P54368 228 aa16.07■□□□□ 0.16
CSNK1D-208ENST00000578501 PTH1RQ03431 593 aa16.07■□□□□ 0.16
CSNK1D-208ENST00000578501 MAP3K21Q5TCX8 1036 aa16.07■□□□□ 0.16
CSNK1D-208ENST00000578501 RCSD1Q6JBY9 416 aa16.07■□□□□ 0.16
CSNK1D-208ENST00000578501 IQCA1Q86XH1 822 aa16.07■□□□□ 0.16
CSNK1D-208ENST00000578501 NCAPG2Q86XI2 1143 aa16.07■□□□□ 0.16
CSNK1D-208ENST00000578501 DGKHQ86XP1 1220 aa16.07■□□□□ 0.16
CSNK1D-208ENST00000578501 DCAF4Q8WV16 495 aa16.07■□□□□ 0.16
CSNK1D-208ENST00000578501 TMEM47Q9BQJ4 181 aa16.07■□□□□ 0.16
CSNK1D-208ENST00000578501 TEX13BQ9BXU2 312 aa16.07■□□□□ 0.16
CSNK1D-208ENST00000578501 KRT23Q9C075 422 aa16.07■□□□□ 0.16
CSNK1D-208ENST00000578501 U3KPZ7 1027 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-208ENST00000578501 RPTORQ8N122 1335 aa16.06■□□□□ 0.16
CSNK1D-208ENST00000578501 TMEM232C9JQI7 657 aa16.06■□□□□ 0.16
CSNK1D-208ENST00000578501 ZKSCAN1P17029 563 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-208ENST00000578501 ERICH6BQ5W0A0 696 aa16.06■□□□□ 0.16
CSNK1D-208ENST00000578501 ANKS1AQ92625 1134 aa16.06■□□□□ 0.16
CSNK1D-208ENST00000578501 MAP4K1Q92918 833 aa16.06■□□□□ 0.16
CSNK1D-208ENST00000578501 KIFC2Q96AC6 838 aa16.06■□□□□ 0.16
CSNK1D-208ENST00000578501 MTMR10Q9NXD2 777 aa16.06■□□□□ 0.16
CSNK1D-208ENST00000578501 ZSWIM5Q9P217 1185 aa16.06■□□□□ 0.16
CSNK1D-208ENST00000578501 ZNF236Q9UL36 1845 aa16.05■□□□□ 0.16
CSNK1D-208ENST00000578501 B4E1Z4 1266 aa16.05■□□□□ 0.16
CSNK1D-208ENST00000578501 KDM4AO75164 1064 aa16.05■□□□□ 0.16
CSNK1D-208ENST00000578501 IGHA2P01877 340 aa16.05■□□□□ 0.16
CSNK1D-208ENST00000578501 CENPBP07199 599 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-208ENST00000578501 FCER1AP12319 257 aa16.05■□□□□ 0.16
CSNK1D-208ENST00000578501 ADORA2AP29274 412 aa16.05■□□□□ 0.16
CSNK1D-208ENST00000578501 DPP9Q86TI2 863 aa16.05■□□□□ 0.16
CSNK1D-208ENST00000578501 C7orf61Q8IZ16 206 aa16.05■□□□□ 0.16
CSNK1D-208ENST00000578501 TDHQ8IZJ6 230 aa16.05■□□□□ 0.16
CSNK1D-208ENST00000578501 HMX1Q9NP08 348 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-208ENST00000578501 SLC5A4Q9NY91 659 aa16.05■□□□□ 0.16
CSNK1D-208ENST00000578501 COL11A1P12107 1806 aaPredicted RBP16.04■□□□□ 0.16
CSNK1D-208ENST00000578501 TRIM32Q13049 653 aa16.04■□□□□ 0.16
CSNK1D-208ENST00000578501 CCL14Q16627 93 aa16.04■□□□□ 0.16
CSNK1D-208ENST00000578501 OLFML2BQ68BL8 750 aa16.04■□□□□ 0.16
CSNK1D-208ENST00000578501 BTNL9Q6UXG8 535 aa16.04■□□□□ 0.16
CSNK1D-208ENST00000578501 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.04■□□□□ 0.16
CSNK1D-208ENST00000578501 SKAP1Q86WV1 359 aa16.04■□□□□ 0.16
CSNK1D-208ENST00000578501 NPLOC4Q8TAT6 608 aa16.04■□□□□ 0.16
CSNK1D-208ENST00000578501 COL25A1Q9BXS0 654 aaPredicted RBP16.04■□□□□ 0.16
CSNK1D-208ENST00000578501 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.04■□□□□ 0.163e-9■■■□□ 16.2
CSNK1D-208ENST00000578501 CTDP1Q9Y5B0 961 aaPredicted RBP16.04■□□□□ 0.16
CSNK1D-208ENST00000578501 COBLO75128 1261 aa16.03■□□□□ 0.16
CSNK1D-208ENST00000578501 CYP21A2P08686 494 aa16.03■□□□□ 0.16
CSNK1D-208ENST00000578501 SNHG28P0DPA3 235 aa16.03■□□□□ 0.16
CSNK1D-208ENST00000578501 PDHBP11177 359 aa16.03■□□□□ 0.16
CSNK1D-208ENST00000578501 PRKAR2AP13861 404 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-208ENST00000578501 MFSD14CQ5VZR4 134 aa16.03■□□□□ 0.16
CSNK1D-208ENST00000578501 SNRNP48Q6IEG0 339 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-208ENST00000578501 KIAA1211Q6ZU35 1233 aa16.03■□□□□ 0.16
CSNK1D-208ENST00000578501 KCTD1Q719H9 257 aa16.03■□□□□ 0.16
CSNK1D-208ENST00000578501 Q7L0L9 218 aa16.03■□□□□ 0.16
CSNK1D-208ENST00000578501 ZSCAN10Q96SZ4 725 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-208ENST00000578501 MMP19Q99542 508 aa16.03■□□□□ 0.16
CSNK1D-208ENST00000578501 ESYT1Q9BSJ8 1104 aa16.03■□□□□ 0.16
CSNK1D-208ENST00000578501 FLRT1Q9NZU1 646 aa16.03■□□□□ 0.16
CSNK1D-208ENST00000578501 ZMYND8Q9ULU4 1186 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-208ENST00000578501 DIS3Q9Y2L1 958 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms