RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 YY1P25490 414 aa9.39□□□□□ -0.91
COPS3-215ENST00000578317 ANP32AP39687 249 aaKnown RBP9.39□□□□□ -0.91
COPS3-215ENST00000578317 AK2P54819 239 aa9.39□□□□□ -0.91
COPS3-215ENST00000578317 TOB2Q14106 344 aaPredicted RBP9.39□□□□□ -0.91
COPS3-215ENST00000578317 SEC23AQ15436 765 aa9.39□□□□□ -0.91
COPS3-215ENST00000578317 Q6ZUG5 572 aa9.39□□□□□ -0.91
COPS3-215ENST00000578317 TMEM179Q6ZVK1 233 aa9.39□□□□□ -0.91
COPS3-215ENST00000578317 USP48Q86UV5 1035 aa9.39□□□□□ -0.91
COPS3-215ENST00000578317 ZNF526Q8TF50 670 aaPredicted RBP9.39□□□□□ -0.91
COPS3-215ENST00000578317 ZNF274Q96GC6 653 aaPredicted RBP9.39□□□□□ -0.91
COPS3-215ENST00000578317 UBAC1Q9BSL1 405 aa9.39□□□□□ -0.91
COPS3-215ENST00000578317 NMRK2Q9NPI5 230 aa9.39□□□□□ -0.91
COPS3-215ENST00000578317 IL17RBQ9NRM6 502 aa9.39□□□□□ -0.91
COPS3-215ENST00000578317 TFIP11Q9UBB9 837 aaKnown RBP9.39□□□□□ -0.91
COPS3-215ENST00000578317 LIMCH1Q9UPQ0 1083 aa9.39□□□□□ -0.91
COPS3-215ENST00000578317 ERICH2A1L162 156 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 UNCXA6NJT0 531 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 IFIT3O14879 490 aaKnown RBP9.38□□□□□ -0.91
COPS3-215ENST00000578317 PPP1R12BO60237 982 aaPredicted RBP9.38□□□□□ -0.91
COPS3-215ENST00000578317 CTNND1O60716 968 aaKnown RBP9.38□□□□□ -0.91
COPS3-215ENST00000578317 CAP2P40123 477 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 RCAN1P53805 252 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 FAM47AQ5JRC9 791 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 TMCO4Q5TGY1 634 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 MIGA2Q7L4E1 593 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 CHST3Q7LGC8 479 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 ENAHQ8N8S7 591 aaPredicted RBP9.38□□□□□ -0.91
COPS3-215ENST00000578317 ZNF516Q92618 1163 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 MKL1Q969V6 931 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 KLRG1Q96E93 195 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 ZSCAN31Q96LW9 406 aaPredicted RBP9.38□□□□□ -0.91
COPS3-215ENST00000578317 ZNF341Q9BYN7 854 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 GZF1Q9H116 711 aaPredicted RBP9.38□□□□□ -0.91
COPS3-215ENST00000578317 KANSL2Q9H9L4 492 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 MTMR4Q9NYA4 1195 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 SYNPO2Q9UMS6 1093 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 SCAF8Q9UPN6 1271 aaKnown RBP9.38□□□□□ -0.91
COPS3-215ENST00000578317 CD2BP2O95400 341 aaKnown RBP9.38□□□□□ -0.91
COPS3-215ENST00000578317 BRD1O95696 1058 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 ASNSP08243 561 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 SLURP2P0DP57 97 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 AKR1B1P15121 316 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 FGD1P98174 961 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 BECN1Q14457 450 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 RRP1BQ14684 758 aaKnown RBP9.38□□□□□ -0.91
COPS3-215ENST00000578317 WTAPQ15007 396 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 PPP2R5BQ15173 497 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 MAP3K11Q16584 847 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 ABCB5Q2M3G0 1257 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 TMEM67Q5HYA8 995 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 PRAMEF18Q5VWM3 479 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 RCSD1Q6JBY9 416 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 LYPD8Q6UX82 237 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 BRF1Q92994 677 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 CHMP4CQ96CF2 233 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 USB1Q9BQ65 265 aaKnown RBP9.38□□□□□ -0.91
COPS3-215ENST00000578317 LY9Q9HBG7 655 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 CABP5Q9NP86 173 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 SH2B1Q9NRF2 756 aaPredicted RBP9.38□□□□□ -0.91
COPS3-215ENST00000578317 NYAP2Q9P242 653 aa9.38□□□□□ -0.91
COPS3-215ENST00000578317 SCN4AP35499 1836 aa9.37□□□□□ -0.91
COPS3-215ENST00000578317 ADAMTSL1Q8N6G6 1762 aa9.37□□□□□ -0.91
COPS3-215ENST00000578317 TNKSO95271 1327 aa9.37□□□□□ -0.91
COPS3-215ENST00000578317 FAM196BA6NMK8 535 aa9.37□□□□□ -0.91
COPS3-215ENST00000578317 ADM5C9JUS6 153 aa9.37□□□□□ -0.91
COPS3-215ENST00000578317 USP2O75604 605 aaPredicted RBP9.37□□□□□ -0.91
COPS3-215ENST00000578317 FMNL1O95466 1100 aaPredicted RBP9.37□□□□□ -0.91
COPS3-215ENST00000578317 GUCY1A2P33402 732 aa9.37□□□□□ -0.91
COPS3-215ENST00000578317 NF2P35240 595 aa9.37□□□□□ -0.91
COPS3-215ENST00000578317 KCNA1Q09470 495 aa9.37□□□□□ -0.91
COPS3-215ENST00000578317 SIAH1Q8IUQ4 282 aa9.37□□□□□ -0.91
COPS3-215ENST00000578317 FAM160A2Q8N612 972 aaPredicted RBP9.37□□□□□ -0.91
COPS3-215ENST00000578317 ZNF784Q8NCA9 323 aaPredicted RBP9.37□□□□□ -0.91
COPS3-215ENST00000578317 CDCA5Q96FF9 252 aa9.37□□□□□ -0.91
COPS3-215ENST00000578317 CEP95Q96GE4 821 aa9.37□□□□□ -0.91
COPS3-215ENST00000578317 TCEANC2Q96MN5 208 aa9.37□□□□□ -0.91
COPS3-215ENST00000578317 MAP3K14Q99558 947 aa9.37□□□□□ -0.91
COPS3-215ENST00000578317 LRRC2Q9BYS8 371 aa9.37□□□□□ -0.91
COPS3-215ENST00000578317 GLIS2Q9BZE0 524 aaPredicted RBP9.37□□□□□ -0.91
COPS3-215ENST00000578317 TPCN1Q9ULQ1 816 aa9.37□□□□□ -0.91
COPS3-215ENST00000578317 DDX60LQ5H9U9 1706 aaKnown RBP9.37□□□□□ -0.91
COPS3-215ENST00000578317 K7ELQ4 463 aaPredicted RBP9.36□□□□□ -0.91
COPS3-215ENST00000578317 TTLL1O95922 423 aa9.36□□□□□ -0.91
COPS3-215ENST00000578317 ITGBL1O95965 494 aaPredicted RBP9.36□□□□□ -0.91
COPS3-215ENST00000578317 GH2P01242 217 aa9.36□□□□□ -0.91
COPS3-215ENST00000578317 TOP1P11387 765 aaKnown RBP9.36□□□□□ -0.91
COPS3-215ENST00000578317 PDIA3P30101 505 aaKnown RBP9.36□□□□□ -0.91
COPS3-215ENST00000578317 FKBP1BP68106 108 aa9.36□□□□□ -0.91
COPS3-215ENST00000578317 JAG1P78504 1218 aa9.36□□□□□ -0.91
COPS3-215ENST00000578317 MMRN1Q13201 1228 aa9.36□□□□□ -0.91
COPS3-215ENST00000578317 CUL4AQ13619 759 aa9.36□□□□□ -0.91
COPS3-215ENST00000578317 NOL9Q5SY16 702 aaKnown RBP9.36□□□□□ -0.91
COPS3-215ENST00000578317 IFIT1BQ5T764 474 aaKnown RBP9.36□□□□□ -0.91
COPS3-215ENST00000578317 MAP1SQ66K74 1059 aaPredicted RBP9.36□□□□□ -0.91
COPS3-215ENST00000578317 HSCBQ8IWL3 235 aa9.36□□□□□ -0.91
COPS3-215ENST00000578317 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.36□□□□□ -0.91
COPS3-215ENST00000578317 TMX3Q96JJ7 454 aa9.36□□□□□ -0.91
COPS3-215ENST00000578317 ZKSCAN3Q9BRR0 538 aa9.36□□□□□ -0.91
COPS3-215ENST00000578317 MAFBQ9Y5Q3 323 aaPredicted RBP9.36□□□□□ -0.91
COPS3-215ENST00000578317 SLC12A7Q9Y666 1083 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms