RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 COLQQ9Y215 455 aaPredicted RBP27.17■■□□□ 1.94
VAPA-205ENST00000578314 PARP14Q460N5 1801 aa27.16■■□□□ 1.94
VAPA-205ENST00000578314 ZBED4O75132 1171 aa27.16■■□□□ 1.94
VAPA-205ENST00000578314 GSPT1P15170 499 aaKnown RBP27.16■■□□□ 1.94
VAPA-205ENST00000578314 CYP2C19P33261 490 aa27.16■■□□□ 1.94
VAPA-205ENST00000578314 HAND2P61296 217 aa27.16■■□□□ 1.94
VAPA-205ENST00000578314 AKNAD1Q5T1N1 836 aa27.16■■□□□ 1.94
VAPA-205ENST00000578314 NECAB2Q7Z6G3 386 aa27.16■■□□□ 1.94
VAPA-205ENST00000578314 KIFC2Q96AC6 838 aa27.16■■□□□ 1.94
VAPA-205ENST00000578314 MMP19Q99542 508 aa27.16■■□□□ 1.94
VAPA-205ENST00000578314 SLC1A4P43007 532 aa27.15■■□□□ 1.94
VAPA-205ENST00000578314 DIS3LQ8TF46 1054 aaKnown RBP27.15■■□□□ 1.94
VAPA-205ENST00000578314 STAG1Q8WVM7 1258 aa27.15■■□□□ 1.94
VAPA-205ENST00000578314 TOMM22Q9NS69 142 aa27.15■■□□□ 1.94
VAPA-205ENST00000578314 ZNF236Q9UL36 1845 aa27.15■■□□□ 1.94
VAPA-205ENST00000578314 TMEM232C9JQI7 657 aa27.14■■□□□ 1.94
VAPA-205ENST00000578314 PLA2G6O60733 806 aa27.14■■□□□ 1.94
VAPA-205ENST00000578314 FDX1P10109 184 aa27.14■■□□□ 1.94
VAPA-205ENST00000578314 MCCP23508 829 aa27.14■■□□□ 1.94
VAPA-205ENST00000578314 KCTD2Q14681 263 aa27.14■■□□□ 1.94
VAPA-205ENST00000578314 RRP12Q5JTH9 1297 aaKnown RBP27.14■■□□□ 1.94
VAPA-205ENST00000578314 SNRNP48Q6IEG0 339 aaKnown RBP27.14■■□□□ 1.94
VAPA-205ENST00000578314 MFSD6Q6ZSS7 791 aa27.14■■□□□ 1.94
VAPA-205ENST00000578314 MAML3Q96JK9 1138 aa27.14■■□□□ 1.94
VAPA-205ENST00000578314 DSCC1Q9BVC3 393 aa27.14■■□□□ 1.94
VAPA-205ENST00000578314 ZNF213O14771 459 aa27.13■■□□□ 1.93
VAPA-205ENST00000578314 OAZ1P54368 228 aa27.13■■□□□ 1.93
VAPA-205ENST00000578314 RCSD1Q6JBY9 416 aa27.13■■□□□ 1.93
VAPA-205ENST00000578314 FAM160B2Q86V87 743 aa27.13■■□□□ 1.93
VAPA-205ENST00000578314 TBC1D10CQ8IV04 446 aa27.13■■□□□ 1.93
VAPA-205ENST00000578314 TRPV1Q8NER1 839 aa27.13■■□□□ 1.93
VAPA-205ENST00000578314 CHURC1Q8WUH1 139 aa27.13■■□□□ 1.93
VAPA-205ENST00000578314 RNF41Q9H4P4 317 aaPredicted RBP27.13■■□□□ 1.93
VAPA-205ENST00000578314 DIS3Q9Y2L1 958 aaKnown RBP27.13■■□□□ 1.93
VAPA-205ENST00000578314 RIPK3Q9Y572 518 aa27.13■■□□□ 1.93
VAPA-205ENST00000578314 CYBAP13498 195 aa27.12■■□□□ 1.93
VAPA-205ENST00000578314 STAT2P52630 851 aa27.12■■□□□ 1.93
VAPA-205ENST00000578314 CPXCR1Q8N123 301 aa27.12■■□□□ 1.93
VAPA-205ENST00000578314 PCDH10Q9P2E7 1040 aa27.12■■□□□ 1.93
VAPA-205ENST00000578314 CTDP1Q9Y5B0 961 aaPredicted RBP27.12■■□□□ 1.93
VAPA-205ENST00000578314 NR2E3Q9Y5X4 410 aa27.12■■□□□ 1.93
VAPA-205ENST00000578314 MSCO60682 206 aa27.11■■□□□ 1.93
VAPA-205ENST00000578314 PGK2P07205 417 aa27.11■■□□□ 1.93
VAPA-205ENST00000578314 NT5C2P49902 561 aa27.11■■□□□ 1.93
VAPA-205ENST00000578314 ZNF792Q3KQV3 632 aa27.11■■□□□ 1.93
VAPA-205ENST00000578314 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.11■■□□□ 1.93
VAPA-205ENST00000578314 RAVER2Q9HCJ3 691 aaKnown RBP27.11■■□□□ 1.93
VAPA-205ENST00000578314 DDX20Q9UHI6 824 aaKnown RBP27.11■■□□□ 1.93
VAPA-205ENST00000578314 MYH4Q9Y623 1939 aa27.11■■□□□ 1.93
VAPA-205ENST00000578314 TOP1P11387 765 aaKnown RBP27.1■■□□□ 1.93
VAPA-205ENST00000578314 CHRDL2Q6WN34 429 aa27.1■■□□□ 1.93
VAPA-205ENST00000578314 TTC14Q96N46 770 aa27.1■■□□□ 1.93
VAPA-205ENST00000578314 TMEM47Q9BQJ4 181 aa27.1■■□□□ 1.93
VAPA-205ENST00000578314 CNGA1P29973 690 aa27.09■■□□□ 1.93
VAPA-205ENST00000578314 KCTD1Q719H9 257 aa27.09■■□□□ 1.93
VAPA-205ENST00000578314 DCAF4Q8WV16 495 aa27.09■■□□□ 1.93
VAPA-205ENST00000578314 IL25Q9H293 177 aa27.09■■□□□ 1.93
VAPA-205ENST00000578314 C11orf49Q9H6J7 331 aa27.09■■□□□ 1.93
VAPA-205ENST00000578314 CTNNA3Q9UI47 895 aa27.09■■□□□ 1.93
VAPA-205ENST00000578314 EVI5O60447 810 aa27.08■■□□□ 1.93
VAPA-205ENST00000578314 FXR1P51114 621 aaKnown RBP eCLIP27.08■■□□□ 1.93
VAPA-205ENST00000578314 CHST13Q8NET6 341 aa27.08■■□□□ 1.93
VAPA-205ENST00000578314 ESR2Q92731 530 aa27.08■■□□□ 1.93
VAPA-205ENST00000578314 CHMP4CQ96CF2 233 aa27.08■■□□□ 1.93
VAPA-205ENST00000578314 FBXO40Q9UH90 709 aa27.08■■□□□ 1.93
VAPA-205ENST00000578314 NRBP1Q9UHY1 535 aa27.08■■□□□ 1.93
VAPA-205ENST00000578314 ISY1Q9ULR0 285 aaKnown RBP27.08■■□□□ 1.93
VAPA-205ENST00000578314 COL11A1P12107 1806 aaPredicted RBP27.08■■□□□ 1.93
VAPA-205ENST00000578314 DNAJC25-GNG10A0A024R161 153 aa27.07■■□□□ 1.92
VAPA-205ENST00000578314 COL6A1P12109 1028 aa27.07■■□□□ 1.92
VAPA-205ENST00000578314 TINF2Q9BSI4 451 aa27.07■■□□□ 1.92
VAPA-205ENST00000578314 NEDD4P46934 1319 aa27.07■■□□□ 1.92
VAPA-205ENST00000578314 ALPK3Q96L96 1907 aa27.06■■□□□ 1.92
VAPA-205ENST00000578314 SEPT4O43236 478 aa27.06■■□□□ 1.92
VAPA-205ENST00000578314 SLC4A3P48751 1232 aa27.06■■□□□ 1.92
VAPA-205ENST00000578314 IKQ13123 557 aaPredicted RBP27.06■■□□□ 1.92
VAPA-205ENST00000578314 IMMTQ16891 758 aaKnown RBP27.06■■□□□ 1.92
VAPA-205ENST00000578314 PRAMEF19Q5SWL8 479 aa27.06■■□□□ 1.92
VAPA-205ENST00000578314 RASGRP2Q7LDG7 609 aa27.06■■□□□ 1.92
VAPA-205ENST00000578314 DDX11Q96FC9 970 aa27.06■■□□□ 1.92
VAPA-205ENST00000578314 PRR12Q9ULL5 1215 aa27.06■■□□□ 1.92
VAPA-205ENST00000578314 ZNF536O15090 1300 aa27.06■■□□□ 1.92
VAPA-205ENST00000578314 RAD50Q92878 1312 aa27.06■■□□□ 1.92
VAPA-205ENST00000578314 CHMLP26374 656 aa27.05■■□□□ 1.92
VAPA-205ENST00000578314 BTNL9Q6UXG8 535 aa27.05■■□□□ 1.92
VAPA-205ENST00000578314 DGKHQ86XP1 1220 aa27.05■■□□□ 1.92
VAPA-205ENST00000578314 MSL3Q8N5Y2 521 aaKnown RBP27.05■■□□□ 1.92
VAPA-205ENST00000578314 RANBP2P49792 3224 aaKnown RBP27.05■■□□□ 1.92
VAPA-205ENST00000578314 TRIOBPQ9H2D6 2365 aa27.04■■□□□ 1.92
VAPA-205ENST00000578314 RUFY2Q8WXA3 655 aa27.04■■□□□ 1.92
VAPA-205ENST00000578314 RBM27Q9P2N5 1060 aaKnown RBP27.04■■□□□ 1.92
VAPA-205ENST00000578314 MTMR7Q9Y216 660 aa27.04■■□□□ 1.92
VAPA-205ENST00000578314 PFASO15067 1338 aa27.04■■□□□ 1.92
VAPA-205ENST00000578314 CCDC96Q2M329 555 aa27.03■■□□□ 1.92
VAPA-205ENST00000578314 TKFCQ3LXA3 575 aa27.03■■□□□ 1.92
VAPA-205ENST00000578314 CCDC178Q5BJE1 867 aa27.03■■□□□ 1.92
VAPA-205ENST00000578314 ANKRD35Q8N283 1001 aa27.03■■□□□ 1.92
VAPA-205ENST00000578314 AGBL1Q96MI9 1066 aa27.03■■□□□ 1.92
VAPA-205ENST00000578314 KDM4AO75164 1064 aa27.02■■□□□ 1.92
VAPA-205ENST00000578314 TTBK2Q6IQ55 1244 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms