RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 CYP2B6P20813 491 aa27.15■■□□□ 1.94
LIMD2-204ENST00000578297 RGS2P41220 211 aa27.15■■□□□ 1.94
LIMD2-204ENST00000578297 SOX10P56693 466 aa27.15■■□□□ 1.94
LIMD2-204ENST00000578297 GRB14Q14449 540 aa27.15■■□□□ 1.94
LIMD2-204ENST00000578297 RASGRP2Q7LDG7 609 aa27.15■■□□□ 1.94
LIMD2-204ENST00000578297 ENAHQ8N8S7 591 aaPredicted RBP27.15■■□□□ 1.94
LIMD2-204ENST00000578297 NCOA7Q8NI08 942 aa27.15■■□□□ 1.94
LIMD2-204ENST00000578297 UBAC1Q9BSL1 405 aa27.15■■□□□ 1.94
LIMD2-204ENST00000578297 BIN2Q9UBW5 565 aaPredicted RBP27.15■■□□□ 1.94
LIMD2-204ENST00000578297 TNKSO95271 1327 aa27.15■■□□□ 1.94
LIMD2-204ENST00000578297 PDHBP11177 359 aa27.14■■□□□ 1.94
LIMD2-204ENST00000578297 COPB2P35606 906 aa27.14■■□□□ 1.94
LIMD2-204ENST00000578297 UBXN2AP68543 259 aa27.14■■□□□ 1.94
LIMD2-204ENST00000578297 IKQ13123 557 aaPredicted RBP27.14■■□□□ 1.94
LIMD2-204ENST00000578297 MAP2K5Q13163 448 aa27.14■■□□□ 1.94
LIMD2-204ENST00000578297 NECTIN1Q15223 517 aa27.14■■□□□ 1.94
LIMD2-204ENST00000578297 STOX1Q6ZVD7 989 aa27.14■■□□□ 1.94
LIMD2-204ENST00000578297 CYB5R4Q7L1T6 521 aa27.14■■□□□ 1.94
LIMD2-204ENST00000578297 NCAPG2Q86XI2 1143 aa27.14■■□□□ 1.94
LIMD2-204ENST00000578297 BRCA2P51587 3418 aa27.13■■□□□ 1.93
LIMD2-204ENST00000578297 SNHG28P0DPA3 235 aa27.13■■□□□ 1.93
LIMD2-204ENST00000578297 RGS19P49795 217 aa27.13■■□□□ 1.93
LIMD2-204ENST00000578297 CCDC96Q2M329 555 aa27.13■■□□□ 1.93
LIMD2-204ENST00000578297 RALYLQ86SE5 291 aaKnown RBP27.13■■□□□ 1.93
LIMD2-204ENST00000578297 ABRAQ8N0Z2 381 aa27.13■■□□□ 1.93
LIMD2-204ENST00000578297 TEX13BQ9BXU2 312 aa27.13■■□□□ 1.93
LIMD2-204ENST00000578297 KAT14Q9H8E8 782 aa27.13■■□□□ 1.93
LIMD2-204ENST00000578297 CTDP1Q9Y5B0 961 aaPredicted RBP27.13■■□□□ 1.93
LIMD2-204ENST00000578297 SLC27A2O14975 620 aa27.12■■□□□ 1.93
LIMD2-204ENST00000578297 OAZ1P54368 228 aa27.12■■□□□ 1.93
LIMD2-204ENST00000578297 CREB3L3Q68CJ9 461 aa27.12■■□□□ 1.93
LIMD2-204ENST00000578297 BTNL9Q6UXG8 535 aa27.12■■□□□ 1.93
LIMD2-204ENST00000578297 TRMT44Q8IYL2 757 aaKnown RBP27.12■■□□□ 1.93
LIMD2-204ENST00000578297 PNMA1Q8ND90 353 aa27.12■■□□□ 1.93
LIMD2-204ENST00000578297 APBA2Q99767 749 aa27.12■■□□□ 1.93
LIMD2-204ENST00000578297 TMEM106CQ9BVX2 250 aa27.12■■□□□ 1.93
LIMD2-204ENST00000578297 HMGCRP04035 888 aa27.11■■□□□ 1.93
LIMD2-204ENST00000578297 INHAP05111 366 aa27.11■■□□□ 1.93
LIMD2-204ENST00000578297 HOXC6P09630 235 aa27.11■■□□□ 1.93
LIMD2-204ENST00000578297 MTFR1Q15390 333 aa27.11■■□□□ 1.93
LIMD2-204ENST00000578297 SEC23AQ15436 765 aa27.11■■□□□ 1.93
LIMD2-204ENST00000578297 ADORA2AP29274 412 aa27.1■■□□□ 1.93
LIMD2-204ENST00000578297 ZNF543Q08ER8 600 aa27.1■■□□□ 1.93
LIMD2-204ENST00000578297 IFIT1BQ5T764 474 aaKnown RBP27.1■■□□□ 1.93
LIMD2-204ENST00000578297 SNRNP48Q6IEG0 339 aaKnown RBP27.1■■□□□ 1.93
LIMD2-204ENST00000578297 CPXCR1Q8N123 301 aa27.1■■□□□ 1.93
LIMD2-204ENST00000578297 TRIB2Q92519 343 aa27.1■■□□□ 1.93
LIMD2-204ENST00000578297 RAVER2Q9HCJ3 691 aaKnown RBP27.1■■□□□ 1.93
LIMD2-204ENST00000578297 PRR12Q9ULL5 1215 aa27.1■■□□□ 1.93
LIMD2-204ENST00000578297 ZNF236Q9UL36 1845 aa27.1■■□□□ 1.93
LIMD2-204ENST00000578297 FRMPD2Q68DX3 1309 aaPredicted RBP27.1■■□□□ 1.93
LIMD2-204ENST00000578297 RBBP6Q7Z6E9 1792 aaKnown RBP27.09■■□□□ 1.93
LIMD2-204ENST00000578297 MYCP01106 439 aaPredicted RBP27.09■■□□□ 1.93
LIMD2-204ENST00000578297 FCER1AP12319 257 aa27.09■■□□□ 1.93
LIMD2-204ENST00000578297 TTBK2Q6IQ55 1244 aa27.09■■□□□ 1.93
LIMD2-204ENST00000578297 MB21D2Q8IYB1 491 aaPredicted RBP27.09■■□□□ 1.93
LIMD2-204ENST00000578297 GPCPD1Q9NPB8 672 aa27.09■■□□□ 1.93
LIMD2-204ENST00000578297 POTEFA5A3E0 1075 aa27.08■■□□□ 1.93
LIMD2-204ENST00000578297 CCL5P13501 91 aa27.08■■□□□ 1.93
LIMD2-204ENST00000578297 GPATCH4Q5T3I0 446 aaKnown RBP27.08■■□□□ 1.93
LIMD2-204ENST00000578297 RNF20Q5VTR2 975 aa27.08■■□□□ 1.93
LIMD2-204ENST00000578297 RIPK3Q9Y572 518 aa27.08■■□□□ 1.93
LIMD2-204ENST00000578297 IFIT3O14879 490 aaKnown RBP27.07■■□□□ 1.92
LIMD2-204ENST00000578297 ZKSCAN1P17029 563 aaPredicted RBP27.07■■□□□ 1.92
LIMD2-204ENST00000578297 SLC16A2P36021 539 aa27.07■■□□□ 1.92
LIMD2-204ENST00000578297 SART3Q15020 963 aaKnown RBP27.07■■□□□ 1.92
LIMD2-204ENST00000578297 CCL14Q16627 93 aa27.07■■□□□ 1.92
LIMD2-204ENST00000578297 DPP9Q86TI2 863 aa27.07■■□□□ 1.92
LIMD2-204ENST00000578297 MMP19Q99542 508 aa27.07■■□□□ 1.92
LIMD2-204ENST00000578297 ERICH2A1L162 156 aa27.06■■□□□ 1.92
LIMD2-204ENST00000578297 ANTXR2P58335 489 aa27.06■■□□□ 1.92
LIMD2-204ENST00000578297 SYDE2Q5VT97 1194 aa27.06■■□□□ 1.92
LIMD2-204ENST00000578297 NPLOC4Q8TAT6 608 aa27.06■■□□□ 1.92
LIMD2-204ENST00000578297 RNF208Q9H0X6 261 aa27.06■■□□□ 1.92
LIMD2-204ENST00000578297 UNC93B1Q9H1C4 597 aa27.06■■□□□ 1.92
LIMD2-204ENST00000578297 SLC5A4Q9NY91 659 aa27.06■■□□□ 1.92
LIMD2-204ENST00000578297 ZNF536O15090 1300 aa27.06■■□□□ 1.92
LIMD2-204ENST00000578297 KIAA0100Q14667 2235 aaKnown RBP27.05■■□□□ 1.92
LIMD2-204ENST00000578297 COBLO75128 1261 aa27.05■■□□□ 1.92
LIMD2-204ENST00000578297 TRIM32Q13049 653 aa27.05■■□□□ 1.92
LIMD2-204ENST00000578297 KCTD2Q14681 263 aa27.05■■□□□ 1.92
LIMD2-204ENST00000578297 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.05■■□□□ 1.92
LIMD2-204ENST00000578297 CHST3Q7LGC8 479 aa27.05■■□□□ 1.92
LIMD2-204ENST00000578297 CHST13Q8NET6 341 aa27.05■■□□□ 1.92
LIMD2-204ENST00000578297 MTA3Q9BTC8 594 aa27.05■■□□□ 1.92
LIMD2-204ENST00000578297 RANBP17Q9H2T7 1088 aaKnown RBP27.05■■□□□ 1.92
LIMD2-204ENST00000578297 ZNFX1Q9P2E3 1918 aaKnown RBP27.04■■□□□ 1.92
LIMD2-204ENST00000578297 WTAPQ15007 396 aa27.04■■□□□ 1.92
LIMD2-204ENST00000578297 TSGA10IPQ3SY00 556 aa27.04■■□□□ 1.92
LIMD2-204ENST00000578297 ASPRV1Q53RT3 343 aa27.04■■□□□ 1.92
LIMD2-204ENST00000578297 MAP3K21Q5TCX8 1036 aa27.04■■□□□ 1.92
LIMD2-204ENST00000578297 IGDCC4Q8TDY8 1250 aa27.04■■□□□ 1.92
LIMD2-204ENST00000578297 AGBL1Q96MI9 1066 aa27.04■■□□□ 1.92
LIMD2-204ENST00000578297 FLRT1Q9NZU1 646 aa27.04■■□□□ 1.92
LIMD2-204ENST00000578297 FBXO40Q9UH90 709 aa27.04■■□□□ 1.92
LIMD2-204ENST00000578297 IGHA2P01877 340 aa27.03■■□□□ 1.92
LIMD2-204ENST00000578297 GJB1P08034 283 aa27.03■■□□□ 1.92
LIMD2-204ENST00000578297 GOLGA8HP0CJ92 632 aa27.03■■□□□ 1.92
LIMD2-204ENST00000578297 MCM5P33992 734 aa27.03■■□□□ 1.92
LIMD2-204ENST00000578297 SLC4A3P48751 1232 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms