RNA–Protein interactions for RNA: ENST00000577913.1

BRIP1-203, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-203ENST00000577913 RASA1P20936 1047 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 EXOSC10Q01780 885 aaKnown RBP6.16□□□□□ -1.42
BRIP1-203ENST00000577913 IKQ13123 557 aaPredicted RBP6.16□□□□□ -1.42
BRIP1-203ENST00000577913 TOB2Q14106 344 aaPredicted RBP6.16□□□□□ -1.42
BRIP1-203ENST00000577913 CCDC96Q2M329 555 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 SHROOM1Q2M3G4 852 aaPredicted RBP6.16□□□□□ -1.42
BRIP1-203ENST00000577913 TSGA10IPQ3SY00 556 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 TJAP1Q5JTD0 557 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 NBPF12Q5TAG4 269 aaPredicted RBP6.16□□□□□ -1.42
BRIP1-203ENST00000577913 DCAF15Q66K64 600 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 CATIPQ7Z7H3 387 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 FOXP4Q8IVH2 680 aaPredicted RBP6.16□□□□□ -1.42
BRIP1-203ENST00000577913 LRRC47Q8N1G4 583 aaKnown RBP6.16□□□□□ -1.42
BRIP1-203ENST00000577913 SNX21Q969T3 373 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 DDX11Q96FC9 970 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 TMX3Q96JJ7 454 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 TMEM87BQ96K49 555 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 ZSCAN31Q96LW9 406 aaPredicted RBP6.16□□□□□ -1.42
BRIP1-203ENST00000577913 GLIS2Q9BZE0 524 aaPredicted RBP6.16□□□□□ -1.42
BRIP1-203ENST00000577913 TAF1DQ9H5J8 278 aaPredicted RBP6.16□□□□□ -1.42
BRIP1-203ENST00000577913 SENP2Q9HC62 589 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 NMRK2Q9NPI5 230 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 PRDM9Q9NQV7 894 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.16□□□□□ -1.42
BRIP1-203ENST00000577913 HCSTQ9UBK5 93 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 CLIP2Q9UDT6 1046 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 SWAP70Q9UH65 585 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 MKRN1Q9UHC7 482 aaKnown RBP6.16□□□□□ -1.42
BRIP1-203ENST00000577913 ANGEL1Q9UNK9 670 aaKnown RBP6.16□□□□□ -1.42
BRIP1-203ENST00000577913 SMC3Q9UQE7 1217 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 CHD4Q14839 1912 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 MYH2Q9UKX2 1941 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 CNTNAP1P78357 1384 aa6.16□□□□□ -1.42
BRIP1-203ENST00000577913 CCDC88AQ3V6T2 1871 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 MYH7P12883 1935 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 ZBTB43O43298 467 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 ORC4O43929 436 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 PCP11498 1178 aaKnown RBP6.15□□□□□ -1.42
BRIP1-203ENST00000577913 VEGFAP15692 232 aaPredicted RBP6.15□□□□□ -1.42
BRIP1-203ENST00000577913 SHMT1P34896 483 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 NF2P35240 595 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 MMP14P50281 582 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 METAP2P50579 478 aaKnown RBP eCLIP6.15□□□□□ -1.42
BRIP1-203ENST00000577913 ICA1Q05084 483 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 SEPT2Q15019 361 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 ME3Q16798 604 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 PTPRNQ16849 979 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 MAP1SQ66K74 1059 aaPredicted RBP6.15□□□□□ -1.42
BRIP1-203ENST00000577913 LYPD8Q6UX82 237 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 USP50Q70EL3 339 aaPredicted RBP6.15□□□□□ -1.42
BRIP1-203ENST00000577913 CCDC84Q86UT8 332 aaPredicted RBP6.15□□□□□ -1.42
BRIP1-203ENST00000577913 FAM83AQ86UY5 434 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 ENAHQ8N8S7 591 aaPredicted RBP6.15□□□□□ -1.42
BRIP1-203ENST00000577913 FAM184AQ8NB25 1140 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 HOOK2Q96ED9 719 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 ZBED3Q96IU2 234 aaPredicted RBP6.15□□□□□ -1.42
BRIP1-203ENST00000577913 TTC14Q96N46 770 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 WRNIP1Q96S55 665 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 FEZ1Q99689 392 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 LY9Q9HBG7 655 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 PICK1Q9NRD5 415 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 SH2B1Q9NRF2 756 aaPredicted RBP6.15□□□□□ -1.42
BRIP1-203ENST00000577913 BRPF3Q9ULD4 1205 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.15□□□□□ -1.42
BRIP1-203ENST00000577913 IVNS1ABPQ9Y6Y0 642 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 TIAM2Q8IVF5 1701 aa6.15□□□□□ -1.42
BRIP1-203ENST00000577913 VPS37CA5D8V6 355 aaPredicted RBP6.14□□□□□ -1.43
BRIP1-203ENST00000577913 TRAF5O00463 557 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 DXOO77932 396 aaKnown RBP6.14□□□□□ -1.43
BRIP1-203ENST00000577913 GOLGA8HP0CJ92 632 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 PDIA3P30101 505 aaKnown RBP6.14□□□□□ -1.43
BRIP1-203ENST00000577913 AKAP17AQ02040 695 aaKnown RBP6.14□□□□□ -1.43
BRIP1-203ENST00000577913 NR6A1Q15406 480 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 RTN1Q16799 776 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 FOXD4L6Q3SYB3 417 aaPredicted RBP6.14□□□□□ -1.43
BRIP1-203ENST00000577913 SUPT20HL1Q3ZLR7 823 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 CCDC178Q5BJE1 867 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 CPLX2Q6PUV4 134 aaKnown RBP6.14□□□□□ -1.43
BRIP1-203ENST00000577913 FOXD4L3Q6VB84 417 aaPredicted RBP6.14□□□□□ -1.43
BRIP1-203ENST00000577913 PNMA8AQ86V59 439 aaPredicted RBP6.14□□□□□ -1.43
BRIP1-203ENST00000577913 ZNF654Q8IZM8 581 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 CMTR1Q8N1G2 835 aaKnown RBP6.14□□□□□ -1.43
BRIP1-203ENST00000577913 TMTC2Q8N394 836 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 FAM160A2Q8N612 972 aaPredicted RBP6.14□□□□□ -1.43
BRIP1-203ENST00000577913 CTCFLQ8NI51 663 aaPredicted RBP6.14□□□□□ -1.43
BRIP1-203ENST00000577913 IGDCC4Q8TDY8 1250 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 ZNF516Q92618 1163 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 ZKSCAN4Q969J2 545 aaPredicted RBP6.14□□□□□ -1.43
BRIP1-203ENST00000577913 CEP95Q96GE4 821 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 CCDC17Q96LX7 622 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 SLC26A6Q9BXS9 759 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 ZNF341Q9BYN7 854 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 SLC6A16Q9GZN6 736 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 DNAJC18Q9H819 358 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 VAT1LQ9HCJ6 419 aa6.14□□□□□ -1.43
BRIP1-203ENST00000577913 HERC5Q9UII4 1024 aaKnown RBP6.14□□□□□ -1.43
BRIP1-203ENST00000577913 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.14□□□□□ -1.43
BRIP1-203ENST00000577913 FRMPD2Q68DX3 1309 aaPredicted RBP6.14□□□□□ -1.43
BRIP1-203ENST00000577913 NAV1Q8NEY1 1877 aa6.13□□□□□ -1.43
BRIP1-203ENST00000577913 hCG_1642624A0A1W2PR95 340 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms