RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 TAF1CQ15572 869 aaPredicted RBP14.8□□□□□ -0.04
MKS1-206ENST00000577824 NOM1Q5C9Z4 860 aaKnown RBP14.8□□□□□ -0.04
MKS1-206ENST00000577824 SYNE3Q6ZMZ3 975 aa14.8□□□□□ -0.04
MKS1-206ENST00000577824 STAG2Q8N3U4 1231 aa14.8□□□□□ -0.04
MKS1-206ENST00000577824 MB21D1Q8N884 522 aa14.8□□□□□ -0.04
MKS1-206ENST00000577824 REPS2Q8NFH8 660 aa14.8□□□□□ -0.04
MKS1-206ENST00000577824 MTMR8Q96EF0 704 aa14.8□□□□□ -0.04
MKS1-206ENST00000577824 LZTS2Q9BRK4 669 aa14.8□□□□□ -0.04
MKS1-206ENST00000577824 FAM217BQ9NTX9 383 aaPredicted RBP14.8□□□□□ -0.04
MKS1-206ENST00000577824 FBXO28Q9NVF7 368 aa14.8□□□□□ -0.04
MKS1-206ENST00000577824 WBP1LQ9NX94 342 aa14.8□□□□□ -0.04
MKS1-206ENST00000577824 HOXC10Q9NYD6 342 aa14.8□□□□□ -0.04
MKS1-206ENST00000577824 MORF4L1Q9UBU8 362 aa14.8□□□□□ -0.04
MKS1-206ENST00000577824 GOLGA8AA7E2F4 631 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 KLRF2D3W0D1 207 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 VWA5AO00534 786 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 ATP2A1O14983 1001 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 GOLGA8HP0CJ92 632 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 BCRP11274 1271 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 RXRAP19793 462 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 HTTP42858 3142 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 MCM2P49736 904 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 GNAQP50148 359 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 FUT2Q10981 343 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 CRHR2Q13324 411 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 FAM110CQ1W6H9 321 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 SLC35G1Q2M3R5 365 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 SYDE2Q5VT97 1194 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 TTBK2Q6IQ55 1244 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 TMTC3Q6ZXV5 915 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 NUP133Q8WUM0 1156 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 ATG4CQ96DT6 458 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 P2RX7Q99572 595 aaKnown RBP14.79□□□□□ -0.04
MKS1-206ENST00000577824 RANBP17Q9H2T7 1088 aaKnown RBP14.79□□□□□ -0.04
MKS1-206ENST00000577824 RIOX1Q9H6W3 641 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 SLC38A10Q9HBR0 1119 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 ZFYVE28Q9HCC9 887 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 RNF186Q9NXI6 227 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 PRR12Q9ULL5 1215 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 MTMR7Q9Y216 660 aa14.79□□□□□ -0.04
MKS1-206ENST00000577824 COL11A1P12107 1806 aaPredicted RBP14.78□□□□□ -0.04
MKS1-206ENST00000577824 CNTNAP5Q8WYK1 1306 aa14.78□□□□□ -0.04
MKS1-206ENST00000577824 CCDC196A0A1B0GTZ2 297 aa14.78□□□□□ -0.04
MKS1-206ENST00000577824 CYTH3O43739 400 aa14.78□□□□□ -0.04
MKS1-206ENST00000577824 PFKFB2O60825 505 aa14.78□□□□□ -0.04
MKS1-206ENST00000577824 CNMDO75829 334 aa14.78□□□□□ -0.04
MKS1-206ENST00000577824 CD2BP2O95400 341 aaKnown RBP14.78□□□□□ -0.04
MKS1-206ENST00000577824 CDC27P30260 824 aa14.78□□□□□ -0.04
MKS1-206ENST00000577824 OAZ1P54368 228 aa14.78□□□□□ -0.04
MKS1-206ENST00000577824 RTN1Q16799 776 aa14.78□□□□□ -0.04
MKS1-206ENST00000577824 C17orf99Q6UX52 265 aa14.78□□□□□ -0.04
MKS1-206ENST00000577824 SMCR8Q8TEV9 937 aaPredicted RBP14.78□□□□□ -0.04
MKS1-206ENST00000577824 RNF216Q9NWF9 866 aaPredicted RBP14.78□□□□□ -0.04
MKS1-206ENST00000577824 ZNF214Q9UL59 606 aaPredicted RBP14.78□□□□□ -0.04
MKS1-206ENST00000577824 LIMCH1Q9UPQ0 1083 aa14.78□□□□□ -0.04
MKS1-206ENST00000577824 RABGAP1Q9Y3P9 1069 aa14.78□□□□□ -0.04
MKS1-206ENST00000577824 PLEKHA8P1O95397 391 aa14.77□□□□□ -0.05
MKS1-206ENST00000577824 LARGE1O95461 756 aa14.77□□□□□ -0.05
MKS1-206ENST00000577824 NTRK3Q16288 839 aa14.77□□□□□ -0.05
MKS1-206ENST00000577824 ME3Q16798 604 aa14.77□□□□□ -0.05
MKS1-206ENST00000577824 NBPF11Q86T75 865 aa14.77□□□□□ -0.05
MKS1-206ENST00000577824 ADGRF4Q8IZF3 695 aa14.77□□□□□ -0.05
MKS1-206ENST00000577824 SRBD1Q8N5C6 995 aaKnown RBP14.77□□□□□ -0.05
MKS1-206ENST00000577824 GTF3C6Q969F1 213 aa14.77□□□□□ -0.05
MKS1-206ENST00000577824 KIFC2Q96AC6 838 aa14.77□□□□□ -0.05
MKS1-206ENST00000577824 TXNRD2Q9NNW7 524 aa14.77□□□□□ -0.05
MKS1-206ENST00000577824 GPCPD1Q9NPB8 672 aa14.77□□□□□ -0.05
MKS1-206ENST00000577824 RBPJLQ9UBG7 517 aa14.77□□□□□ -0.05
MKS1-206ENST00000577824 ZNF236Q9UL36 1845 aa14.76□□□□□ -0.05
MKS1-206ENST00000577824 ZNF536O15090 1300 aa14.76□□□□□ -0.05
MKS1-206ENST00000577824 IFNAR1P17181 557 aa14.76□□□□□ -0.05
MKS1-206ENST00000577824 SLC16A2P36021 539 aa14.76□□□□□ -0.05
MKS1-206ENST00000577824 ST3GAL1Q11201 340 aa14.76□□□□□ -0.05
MKS1-206ENST00000577824 SCRN1Q12765 414 aa14.76□□□□□ -0.05
MKS1-206ENST00000577824 IKQ13123 557 aaPredicted RBP14.76□□□□□ -0.05
MKS1-206ENST00000577824 RAB11FIP4Q86YS3 637 aa14.76□□□□□ -0.05
MKS1-206ENST00000577824 CCDC144CPQ8IYA2 1237 aa14.76□□□□□ -0.05
MKS1-206ENST00000577824 SNX21Q969T3 373 aa14.76□□□□□ -0.05
MKS1-206ENST00000577824 ZSCAN31Q96LW9 406 aaPredicted RBP14.76□□□□□ -0.05
MKS1-206ENST00000577824 UBA5Q9GZZ9 404 aa14.76□□□□□ -0.05
MKS1-206ENST00000577824 JMJD4Q9H9V9 463 aa14.76□□□□□ -0.05
MKS1-206ENST00000577824 SH2B1Q9NRF2 756 aaPredicted RBP14.76□□□□□ -0.05
MKS1-206ENST00000577824 BTBD7Q9P203 1132 aa14.76□□□□□ -0.05
MKS1-206ENST00000577824 TRPA1O75762 1119 aa14.75□□□□□ -0.05
MKS1-206ENST00000577824 ADD1P35611 737 aaKnown RBP14.75□□□□□ -0.05
MKS1-206ENST00000577824 ERVK-9P63128 1117 aa14.75□□□□□ -0.05
MKS1-206ENST00000577824 ERVK-24P63145 666 aa14.75□□□□□ -0.05
MKS1-206ENST00000577824 TMEM132BQ14DG7 1078 aa14.75□□□□□ -0.05
MKS1-206ENST00000577824 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.75□□□□□ -0.05
MKS1-206ENST00000577824 LARP6Q9BRS8 491 aaKnown RBP14.75□□□□□ -0.05
MKS1-206ENST00000577824 SLKQ9H2G2 1235 aaPredicted RBP14.75□□□□□ -0.05
MKS1-206ENST00000577824 CPVLQ9H3G5 476 aa14.75□□□□□ -0.05
MKS1-206ENST00000577824 PNMA2Q9UL42 364 aa14.75□□□□□ -0.05
MKS1-206ENST00000577824 ZBTB5O15062 677 aa14.74□□□□□ -0.05
MKS1-206ENST00000577824 ZBED4O75132 1171 aa14.74□□□□□ -0.05
MKS1-206ENST00000577824 ICAM1P05362 532 aa14.74□□□□□ -0.05
MKS1-206ENST00000577824 CDC37Q16543 378 aaPredicted RBP14.74□□□□□ -0.05
MKS1-206ENST00000577824 SHCBP1Q8NEM2 672 aa14.74□□□□□ -0.05
MKS1-206ENST00000577824 CHMP4CQ96CF2 233 aa14.74□□□□□ -0.05
MKS1-206ENST00000577824 TEX13BQ9BXU2 312 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms