RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 COL11A1P12107 1806 aaPredicted RBP17.18■□□□□ 0.34
PPP4R1-206ENST00000577779 PARP14Q460N5 1801 aa17.17■□□□□ 0.34
PPP4R1-206ENST00000577779 IDH1O75874 414 aaKnown RBP17.17■□□□□ 0.34
PPP4R1-206ENST00000577779 POLR3DP05423 398 aaPredicted RBP17.17■□□□□ 0.34
PPP4R1-206ENST00000577779 GNAI3P08754 354 aa17.17■□□□□ 0.34
PPP4R1-206ENST00000577779 CST5P28325 142 aaPredicted RBP17.17■□□□□ 0.34
PPP4R1-206ENST00000577779 IRX5P78411 483 aaPredicted RBP17.17■□□□□ 0.34
PPP4R1-206ENST00000577779 RIOX2Q8IUF8 465 aa17.17■□□□□ 0.34
PPP4R1-206ENST00000577779 API5Q9BZZ5 524 aaKnown RBP17.17■□□□□ 0.34
PPP4R1-206ENST00000577779 SPC25Q9HBM1 224 aa17.17■□□□□ 0.34
PPP4R1-206ENST00000577779 NOB1Q9ULX3 412 aaKnown RBP17.17■□□□□ 0.34
PPP4R1-206ENST00000577779 BRWD1Q9NSI6 2320 aa17.16■□□□□ 0.34
PPP4R1-206ENST00000577779 MSL3Q8N5Y2 521 aaKnown RBP17.16■□□□□ 0.34
PPP4R1-206ENST00000577779 SNX27Q96L92 541 aa17.16■□□□□ 0.34
PPP4R1-206ENST00000577779 DBNDD2Q9BQY9 259 aa17.16■□□□□ 0.34
PPP4R1-206ENST00000577779 HIPK3Q9H422 1215 aa17.16■□□□□ 0.34
PPP4R1-206ENST00000577779 TRIOO75962 3097 aa17.15■□□□□ 0.34
PPP4R1-206ENST00000577779 E9PSI1 815 aa17.15■□□□□ 0.34
PPP4R1-206ENST00000577779 SMIM22K7EJ46 135 aa17.15■□□□□ 0.34
PPP4R1-206ENST00000577779 RFXAPO00287 272 aa17.15■□□□□ 0.34
PPP4R1-206ENST00000577779 POU3F3P20264 500 aaPredicted RBP17.15■□□□□ 0.34
PPP4R1-206ENST00000577779 STAT3P40763 770 aa17.15■□□□□ 0.34
PPP4R1-206ENST00000577779 MRE11P49959 708 aa17.15■□□□□ 0.34
PPP4R1-206ENST00000577779 GABPAQ06546 454 aa17.15■□□□□ 0.34
PPP4R1-206ENST00000577779 GNASQ5JWF2 1037 aa17.15■□□□□ 0.34
PPP4R1-206ENST00000577779 TMEM179Q6ZVK1 233 aa17.15■□□□□ 0.34
PPP4R1-206ENST00000577779 MAGEB6Q8N7X4 407 aa17.15■□□□□ 0.34
PPP4R1-206ENST00000577779 HLA-CQ95604 372 aa17.15■□□□□ 0.34
PPP4R1-206ENST00000577779 SH2D4AQ9H788 454 aa17.15■□□□□ 0.34
PPP4R1-206ENST00000577779 ARHGEF10LQ9HCE6 1279 aa17.15■□□□□ 0.34
PPP4R1-206ENST00000577779 ZBBXA8MT70 800 aa17.14■□□□□ 0.33
PPP4R1-206ENST00000577779 WDR46O15213 610 aaKnown RBP17.14■□□□□ 0.33
PPP4R1-206ENST00000577779 SNAI1O95863 264 aaPredicted RBP17.14■□□□□ 0.33
PPP4R1-206ENST00000577779 CD4P01730 458 aa17.14■□□□□ 0.33
PPP4R1-206ENST00000577779 COPB2P35606 906 aa17.14■□□□□ 0.33
PPP4R1-206ENST00000577779 CCL23P55773 120 aa17.14■□□□□ 0.33
PPP4R1-206ENST00000577779 TNNI3KQ59H18 835 aa17.14■□□□□ 0.33
PPP4R1-206ENST00000577779 FAM9BQ8IZU0 186 aa17.14■□□□□ 0.33
PPP4R1-206ENST00000577779 ZNF512BQ96KM6 892 aaPredicted RBP17.14■□□□□ 0.33
PPP4R1-206ENST00000577779 VCPKMTQ9H867 229 aa17.14■□□□□ 0.33
PPP4R1-206ENST00000577779 GPR108Q9NPR9 543 aa17.14■□□□□ 0.33
PPP4R1-206ENST00000577779 ADAMTS5Q9UNA0 930 aa17.14■□□□□ 0.33
PPP4R1-206ENST00000577779 FPGT-TNNI3KV9GXZ4 949 aa17.14■□□□□ 0.33
PPP4R1-206ENST00000577779 UMODL1Q5DID0 1318 aa17.14■□□□□ 0.33
PPP4R1-206ENST00000577779 NAV1Q8NEY1 1877 aa17.14■□□□□ 0.33
PPP4R1-206ENST00000577779 PI4K2BG5E9Z4 385 aa17.13■□□□□ 0.33
PPP4R1-206ENST00000577779 ABCB7O75027 752 aa17.13■□□□□ 0.33
PPP4R1-206ENST00000577779 ATP2A2P16615 1042 aaKnown RBP17.13■□□□□ 0.33
PPP4R1-206ENST00000577779 GJA9P57773 515 aa17.13■□□□□ 0.33
PPP4R1-206ENST00000577779 CLEC10AQ8IUN9 316 aa17.13■□□□□ 0.33
PPP4R1-206ENST00000577779 UPF3AQ9H1J1 476 aaKnown RBP17.13■□□□□ 0.33
PPP4R1-206ENST00000577779 CERS4Q9HA82 394 aa17.13■□□□□ 0.33
PPP4R1-206ENST00000577779 TMX2Q9Y320 296 aa17.13■□□□□ 0.33
PPP4R1-206ENST00000577779 VWA5AO00534 786 aa17.12■□□□□ 0.33
PPP4R1-206ENST00000577779 ADCY6O43306 1168 aa17.12■□□□□ 0.33
PPP4R1-206ENST00000577779 EVX2Q03828 476 aa17.12■□□□□ 0.33
PPP4R1-206ENST00000577779 ICA1Q05084 483 aa17.12■□□□□ 0.33
PPP4R1-206ENST00000577779 ACVR2BQ13705 512 aa17.12■□□□□ 0.33
PPP4R1-206ENST00000577779 TMEM67Q5HYA8 995 aa17.12■□□□□ 0.33
PPP4R1-206ENST00000577779 KRT40Q6A162 431 aa17.12■□□□□ 0.33
PPP4R1-206ENST00000577779 MAMDC4Q6UXC1 1216 aa17.12■□□□□ 0.33
PPP4R1-206ENST00000577779 RPUSD2Q8IZ73 545 aaKnown RBP17.12■□□□□ 0.33
PPP4R1-206ENST00000577779 DDX11Q96FC9 970 aa17.12■□□□□ 0.33
PPP4R1-206ENST00000577779 FBXO28Q9NVF7 368 aa17.12■□□□□ 0.33
PPP4R1-206ENST00000577779 ZNF214Q9UL59 606 aaPredicted RBP17.12■□□□□ 0.33
PPP4R1-206ENST00000577779 PNMA6EA0A0J9YXQ4 647 aa17.11■□□□□ 0.33
PPP4R1-206ENST00000577779 PRR33A8MZF0 331 aa17.11■□□□□ 0.33
PPP4R1-206ENST00000577779 CA3P07451 260 aa17.11■□□□□ 0.33
PPP4R1-206ENST00000577779 CCDC144BQ3MJ40 725 aa17.11■□□□□ 0.33
PPP4R1-206ENST00000577779 SIAH1Q8IUQ4 282 aa17.11■□□□□ 0.33
PPP4R1-206ENST00000577779 MCM9Q9NXL9 1143 aa17.11■□□□□ 0.33
PPP4R1-206ENST00000577779 MYH8P13535 1937 aa17.1■□□□□ 0.33
PPP4R1-206ENST00000577779 EPOPA6NHQ4 379 aa17.1■□□□□ 0.33
PPP4R1-206ENST00000577779 OS9Q13438 667 aaPredicted RBP17.1■□□□□ 0.33
PPP4R1-206ENST00000577779 UIMC1Q96RL1 719 aa17.1■□□□□ 0.33
PPP4R1-206ENST00000577779 NOC4LQ9BVI4 516 aaKnown RBP17.1■□□□□ 0.33
PPP4R1-206ENST00000577779 WNT8AQ9H1J5 351 aa17.1■□□□□ 0.33
PPP4R1-206ENST00000577779 CD320Q9NPF0 282 aa17.1■□□□□ 0.33
PPP4R1-206ENST00000577779 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.1■□□□□ 0.33
PPP4R1-206ENST00000577779 PPP1R9AQ9ULJ8 1098 aa17.1■□□□□ 0.33
PPP4R1-206ENST00000577779 MCM3APO60318 1980 aa17.09■□□□□ 0.33
PPP4R1-206ENST00000577779 GNAI2P04899 355 aa17.09■□□□□ 0.33
PPP4R1-206ENST00000577779 BEX3Q00994 111 aa17.09■□□□□ 0.33
PPP4R1-206ENST00000577779 SLC43A3Q8NBI5 491 aa17.09■□□□□ 0.33
PPP4R1-206ENST00000577779 REPS2Q8NFH8 660 aa17.09■□□□□ 0.33
PPP4R1-206ENST00000577779 ARNTL2Q8WYA1 636 aa17.09■□□□□ 0.33
PPP4R1-206ENST00000577779 RIOK1Q9BRS2 568 aaKnown RBP17.09■□□□□ 0.33
PPP4R1-206ENST00000577779 ABHD16BQ9H3Z7 469 aa17.09■□□□□ 0.33
PPP4R1-206ENST00000577779 CFAP54Q96N23 3096 aa17.09■□□□□ 0.33
PPP4R1-206ENST00000577779 USP34Q70CQ2 3546 aa17.09■□□□□ 0.33
PPP4R1-206ENST00000577779 DNAJC25-GNG10A0A024R161 153 aa17.08■□□□□ 0.32
PPP4R1-206ENST00000577779 MAGEB6P1A0A0J9YX57 407 aa17.08■□□□□ 0.32
PPP4R1-206ENST00000577779 CTAGE5O15320 804 aa17.08■□□□□ 0.32
PPP4R1-206ENST00000577779 AKR1B1P15121 316 aa17.08■□□□□ 0.32
PPP4R1-206ENST00000577779 SLFN5Q08AF3 891 aa17.08■□□□□ 0.32
PPP4R1-206ENST00000577779 SNRNP48Q6IEG0 339 aaKnown RBP17.08■□□□□ 0.32
PPP4R1-206ENST00000577779 TMED8Q6PL24 325 aaPredicted RBP17.08■□□□□ 0.32
PPP4R1-206ENST00000577779 CXCL17Q6UXB2 119 aa17.08■□□□□ 0.32
PPP4R1-206ENST00000577779 ZNF467Q7Z7K2 595 aaPredicted RBP17.08■□□□□ 0.32
PPP4R1-206ENST00000577779 SCLYQ96I15 445 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms