RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 PDHBP11177 359 aa22.71■■□□□ 1.23
SS18-208ENST00000577751 ELNP15502 786 aa22.71■■□□□ 1.23
SS18-208ENST00000577751 GRB14Q14449 540 aa22.71■■□□□ 1.23
SS18-208ENST00000577751 NCOA7Q8NI08 942 aa22.71■■□□□ 1.23
SS18-208ENST00000577751 CHMP4CQ96CF2 233 aa22.71■■□□□ 1.23
SS18-208ENST00000577751 ZNF236Q9UL36 1845 aa22.71■■□□□ 1.23
SS18-208ENST00000577751 SLC27A2O14975 620 aa22.7■■□□□ 1.22
SS18-208ENST00000577751 MAP2K5Q13163 448 aa22.7■■□□□ 1.22
SS18-208ENST00000577751 SEC23AQ15436 765 aa22.7■■□□□ 1.22
SS18-208ENST00000577751 WDR78Q5VTH9 848 aa22.7■■□□□ 1.22
SS18-208ENST00000577751 CREB3L3Q68CJ9 461 aa22.7■■□□□ 1.22
SS18-208ENST00000577751 BTNL9Q6UXG8 535 aa22.7■■□□□ 1.22
SS18-208ENST00000577751 UBAC1Q9BSL1 405 aa22.7■■□□□ 1.22
SS18-208ENST00000577751 CWC22Q9HCG8 908 aaKnown RBP22.7■■□□□ 1.22
SS18-208ENST00000577751 MTMR7Q9Y216 660 aa22.7■■□□□ 1.22
SS18-208ENST00000577751 ZBED4O75132 1171 aa22.69■■□□□ 1.22
SS18-208ENST00000577751 CYP2B6P20813 491 aa22.69■■□□□ 1.22
SS18-208ENST00000577751 RGS2P41220 211 aa22.69■■□□□ 1.22
SS18-208ENST00000577751 RGS19P49795 217 aa22.69■■□□□ 1.22
SS18-208ENST00000577751 NCAPG2Q86XI2 1143 aa22.69■■□□□ 1.22
SS18-208ENST00000577751 PNMA1Q8ND90 353 aa22.69■■□□□ 1.22
SS18-208ENST00000577751 TEX13BQ9BXU2 312 aa22.69■■□□□ 1.22
SS18-208ENST00000577751 IVNS1ABPQ9Y6Y0 642 aa22.69■■□□□ 1.22
SS18-208ENST00000577751 ZNFX1Q9P2E3 1918 aaKnown RBP22.69■■□□□ 1.22
SS18-208ENST00000577751 HOXC6P09630 235 aa22.68■■□□□ 1.22
SS18-208ENST00000577751 COPB2P35606 906 aa22.68■■□□□ 1.22
SS18-208ENST00000577751 OAZ1P54368 228 aa22.68■■□□□ 1.22
SS18-208ENST00000577751 SOX10P56693 466 aa22.68■■□□□ 1.22
SS18-208ENST00000577751 CCDC96Q2M329 555 aa22.68■■□□□ 1.22
SS18-208ENST00000577751 TTBK2Q6IQ55 1244 aa22.68■■□□□ 1.22
SS18-208ENST00000577751 RALYLQ86SE5 291 aaKnown RBP22.68■■□□□ 1.22
SS18-208ENST00000577751 MB21D2Q8IYB1 491 aaPredicted RBP22.68■■□□□ 1.22
SS18-208ENST00000577751 ABRAQ8N0Z2 381 aa22.68■■□□□ 1.22
SS18-208ENST00000577751 KAT14Q9H8E8 782 aa22.68■■□□□ 1.22
SS18-208ENST00000577751 PRR12Q9ULL5 1215 aa22.68■■□□□ 1.22
SS18-208ENST00000577751 ISY1Q9ULR0 285 aaKnown RBP22.68■■□□□ 1.22
SS18-208ENST00000577751 UBXN2AP68543 259 aa22.67■■□□□ 1.22
SS18-208ENST00000577751 ZNF543Q08ER8 600 aa22.67■■□□□ 1.22
SS18-208ENST00000577751 IKQ13123 557 aaPredicted RBP22.67■■□□□ 1.22
SS18-208ENST00000577751 MTFR1Q15390 333 aa22.67■■□□□ 1.22
SS18-208ENST00000577751 TRIB2Q92519 343 aa22.67■■□□□ 1.22
SS18-208ENST00000577751 APBA2Q99767 749 aa22.67■■□□□ 1.22
SS18-208ENST00000577751 RIPK3Q9Y572 518 aa22.67■■□□□ 1.22
SS18-208ENST00000577751 BRCA2P51587 3418 aa22.67■■□□□ 1.22
SS18-208ENST00000577751 ZNF536O15090 1300 aa22.66■■□□□ 1.22
SS18-208ENST00000577751 FRMPD2Q68DX3 1309 aaPredicted RBP22.66■■□□□ 1.22
SS18-208ENST00000577751 INHAP05111 366 aa22.66■■□□□ 1.22
SS18-208ENST00000577751 ANTXR2P58335 489 aa22.66■■□□□ 1.22
SS18-208ENST00000577751 IFIT1BQ5T764 474 aaKnown RBP22.66■■□□□ 1.22
SS18-208ENST00000577751 SNRNP48Q6IEG0 339 aaKnown RBP22.66■■□□□ 1.22
SS18-208ENST00000577751 TRMT44Q8IYL2 757 aaKnown RBP22.66■■□□□ 1.22
SS18-208ENST00000577751 CPXCR1Q8N123 301 aa22.66■■□□□ 1.22
SS18-208ENST00000577751 RAVER2Q9HCJ3 691 aaKnown RBP22.66■■□□□ 1.22
SS18-208ENST00000577751 BIN2Q9UBW5 565 aaPredicted RBP22.66■■□□□ 1.22
SS18-208ENST00000577751 CTDP1Q9Y5B0 961 aaPredicted RBP22.66■■□□□ 1.22
SS18-208ENST00000577751 HMGCRP04035 888 aa22.65■■□□□ 1.22
SS18-208ENST00000577751 ADORA2AP29274 412 aa22.65■■□□□ 1.22
SS18-208ENST00000577751 TSGA10IPQ3SY00 556 aa22.65■■□□□ 1.22
SS18-208ENST00000577751 GPATCH4Q5T3I0 446 aaKnown RBP22.65■■□□□ 1.22
SS18-208ENST00000577751 TMEM106CQ9BVX2 250 aa22.65■■□□□ 1.22
SS18-208ENST00000577751 GPCPD1Q9NPB8 672 aa22.65■■□□□ 1.22
SS18-208ENST00000577751 POTEFA5A3E0 1075 aa22.64■■□□□ 1.21
SS18-208ENST00000577751 IFIT3O14879 490 aaKnown RBP22.64■■□□□ 1.21
SS18-208ENST00000577751 IGHA2P01877 340 aa22.64■■□□□ 1.21
SS18-208ENST00000577751 FCER1AP12319 257 aa22.64■■□□□ 1.21
SS18-208ENST00000577751 CCL5P13501 91 aa22.64■■□□□ 1.21
SS18-208ENST00000577751 SLC16A2P36021 539 aa22.64■■□□□ 1.21
SS18-208ENST00000577751 CCL14Q16627 93 aa22.64■■□□□ 1.21
SS18-208ENST00000577751 SYDE2Q5VT97 1194 aa22.64■■□□□ 1.21
SS18-208ENST00000577751 RNF20Q5VTR2 975 aa22.64■■□□□ 1.21
SS18-208ENST00000577751 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.64■■□□□ 1.21
SS18-208ENST00000577751 CHST3Q7LGC8 479 aa22.64■■□□□ 1.21
SS18-208ENST00000577751 NPLOC4Q8TAT6 608 aa22.64■■□□□ 1.21
SS18-208ENST00000577751 IGDCC4Q8TDY8 1250 aa22.64■■□□□ 1.21
SS18-208ENST00000577751 MTA3Q9BTC8 594 aa22.64■■□□□ 1.21
SS18-208ENST00000577751 RANBP17Q9H2T7 1088 aaKnown RBP22.64■■□□□ 1.21
SS18-208ENST00000577751 COBLO75128 1261 aa22.63■■□□□ 1.21
SS18-208ENST00000577751 MYCP01106 439 aaPredicted RBP22.63■■□□□ 1.21
SS18-208ENST00000577751 TRIM32Q13049 653 aa22.63■■□□□ 1.21
SS18-208ENST00000577751 MAP3K21Q5TCX8 1036 aa22.63■■□□□ 1.21
SS18-208ENST00000577751 MMP19Q99542 508 aa22.63■■□□□ 1.21
SS18-208ENST00000577751 KIAA0100Q14667 2235 aaKnown RBP22.63■■□□□ 1.21
SS18-208ENST00000577751 ERICH2A1L162 156 aa22.62■■□□□ 1.21
SS18-208ENST00000577751 GOLGA8HP0CJ92 632 aa22.62■■□□□ 1.21
SS18-208ENST00000577751 ZKSCAN1P17029 563 aaPredicted RBP22.62■■□□□ 1.21
SS18-208ENST00000577751 COL9A3Q14050 684 aaPredicted RBP22.62■■□□□ 1.21
SS18-208ENST00000577751 SART3Q15020 963 aaKnown RBP22.62■■□□□ 1.21
SS18-208ENST00000577751 DPP9Q86TI2 863 aa22.62■■□□□ 1.21
SS18-208ENST00000577751 CHST13Q8NET6 341 aa22.62■■□□□ 1.21
SS18-208ENST00000577751 KCNB2Q92953 911 aa22.62■■□□□ 1.21
SS18-208ENST00000577751 AGBL1Q96MI9 1066 aa22.62■■□□□ 1.21
SS18-208ENST00000577751 UNC93B1Q9H1C4 597 aa22.62■■□□□ 1.21
SS18-208ENST00000577751 SENP2Q9HC62 589 aa22.62■■□□□ 1.21
SS18-208ENST00000577751 FLRT1Q9NZU1 646 aa22.62■■□□□ 1.21
SS18-208ENST00000577751 MCM5P33992 734 aa22.61■■□□□ 1.21
SS18-208ENST00000577751 SNAP25P60880 206 aa22.61■■□□□ 1.21
SS18-208ENST00000577751 KCTD2Q14681 263 aa22.61■■□□□ 1.21
SS18-208ENST00000577751 WTAPQ15007 396 aa22.61■■□□□ 1.21
SS18-208ENST00000577751 ASPRV1Q53RT3 343 aa22.61■■□□□ 1.21
SS18-208ENST00000577751 RASEFQ8IZ41 740 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms