RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 A0A1W2PRG0 241 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 SPDYE5A6NIY4 337 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 C19orf81C9J6K1 198 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 MPHOSPH10O00566 681 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 CXCL11O14625 94 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 CALM1P0DP23 149 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 CALM2P0DP24 149 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 CALM3P0DP25 149 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 ICA1Q05084 483 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 SH3D19Q5HYK7 790 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 ZNF697Q5TEC3 545 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 ANKLE1Q8NAG6 615 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 BRF1Q92994 677 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 TCEANC2Q96MN5 208 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 FAM161BQ96MY7 647 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 ELP3Q9H9T3 547 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 AS3MTQ9HBK9 375 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 SENP2Q9HC62 589 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 GPHNQ9NQX3 736 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 PICK1Q9NRD5 415 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 CLIP2Q9UDT6 1046 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 BRPF3Q9ULD4 1205 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 MYPNQ86TC9 1320 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 DOCK1Q14185 1865 aa13.02□□□□□ -0.33
CDK5RAP3-204ENST00000577664 DDAH1O94760 285 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 CD2BP2O95400 341 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 TFRCP02786 760 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 SMARCA1P28370 1054 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 PDIA3P30101 505 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 BACE1P56817 501 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 RAB3GAP1Q15042 981 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 APOA5Q6Q788 366 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 ZNF280CQ8ND82 737 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 PNMA1Q8ND90 353 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 CHMP4CQ96CF2 233 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 C12orf42Q96LP6 360 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 LRRC2Q9BYS8 371 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 SH2D4AQ9H788 454 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 ARHGEF10LQ9HCE6 1279 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 SH2B1Q9NRF2 756 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 BIN2Q9UBW5 565 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 TPCN1Q9ULQ1 816 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 STX8Q9UNK0 236 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 KCNH4Q9UQ05 1017 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 RBM19Q9Y4C8 960 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 PHIPQ8WWQ0 1821 aa13.01□□□□□ -0.33
CDK5RAP3-204ENST00000577664 ATAD5Q96QE3 1844 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 CCDC69A6NI79 296 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 USP17L10C9JJH3 530 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 PLA2G6O60733 806 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 PFKFB2O60825 505 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 SYN1P17600 705 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 USP14P54578 494 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 PPIL2Q13356 520 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 CATIPQ7Z7H3 387 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 CNKSR2Q8WXI2 1034 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 LPAR1Q92633 364 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 GMCL1Q96IK5 515 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 DEFB118Q96PH6 123 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 KAT14Q9H8E8 782 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 SLC12A7Q9Y666 1083 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 ZHX2Q9Y6X8 837 aa13□□□□□ -0.33
CDK5RAP3-204ENST00000577664 PALM3A6NDB9 673 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 BTBD19C9JJ37 291 aa12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 F5H6K3 240 aa12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 CETPP11597 493 aa12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 FGD1P98174 961 aa12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 KLRC3Q07444 240 aa12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 APOBRQ0VD83 1088 aa12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 CUL4AQ13619 759 aa12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 ME3Q16798 604 aa12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 ZNF654Q8IZM8 581 aa12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 FANCBQ8NB91 859 aa12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 ACER1Q8TDN7 264 aa12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 PXYLP1Q8TE99 480 aa12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 DIS3LQ8TF46 1054 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 VCPKMTQ9H867 229 aa12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 FAM217BQ9NTX9 383 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-204ENST00000577664 KLF18A0A0U1RQI7 1052 aa12.98□□□□□ -0.33
CDK5RAP3-204ENST00000577664 ZBTB43O43298 467 aa12.98□□□□□ -0.33
CDK5RAP3-204ENST00000577664 PDHBP11177 359 aa12.98□□□□□ -0.33
CDK5RAP3-204ENST00000577664 PRKCZQ05513 592 aa12.98□□□□□ -0.33
CDK5RAP3-204ENST00000577664 SPP2Q13103 211 aa12.98□□□□□ -0.33
CDK5RAP3-204ENST00000577664 GPATCH4Q5T3I0 446 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-204ENST00000577664 USP17L2Q6R6M4 530 aa12.98□□□□□ -0.33
CDK5RAP3-204ENST00000577664 SYNE3Q6ZMZ3 975 aa12.98□□□□□ -0.33
CDK5RAP3-204ENST00000577664 DCAF4Q8WV16 495 aa12.98□□□□□ -0.33
CDK5RAP3-204ENST00000577664 TMX3Q96JJ7 454 aa12.98□□□□□ -0.33
CDK5RAP3-204ENST00000577664 SEMA6BQ9H3T3 888 aa12.98□□□□□ -0.33
CDK5RAP3-204ENST00000577664 GOPCQ9HD26 462 aa12.98□□□□□ -0.33
CDK5RAP3-204ENST00000577664 EMILIN3Q9NT22 766 aa12.98□□□□□ -0.33
CDK5RAP3-204ENST00000577664 BDP1A6H8Y1 2624 aa12.98□□□□□ -0.33
CDK5RAP3-204ENST00000577664 MYH4Q9Y623 1939 aa12.98□□□□□ -0.33
CDK5RAP3-204ENST00000577664 A0A0G2JLL6 359 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 CCDC196A0A1B0GTZ2 297 aa12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 K7ELQ4 463 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 IRF6O14896 467 aa12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 FMNL1O95466 1100 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 GRM4Q14833 912 aa12.97□□□□□ -0.33
CDK5RAP3-204ENST00000577664 ASPRV1Q53RT3 343 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms